hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-09430517/chunk_1/iprscan-20080810-09430517.nocrc
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Query sequence: fj08031
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00360                                                 105.5    5.9e-27   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00360    1/1     107   180 ..     1   121 []   105.5  5.9e-27

Alignments of top-scoring domains:
SM00360: domain 1 of 1, from 107 to 180: score 105.5, E = 5.9e-27
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                      +l V +L  +  +te dLre+F              sk+G++ +v i
     fj08031   107    CLGVFGL--SLYTTERDLREVF--------------SKYGPIADVSI 137  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                   v+d +                     +++s+GfaFV Fe+++dA+ A   
     fj08031   138 VYDQQ---------------------SRRSRGFAFVYFENVDDAKEA--K 164  

                   ealnaskGkeledgGrptlglrVe<-*
                   e  n   G+el  +Gr+   +rV+   
     fj08031   165 ERAN---GMEL--DGRR---IRVD    180  

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