hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-09552576/chunk_1/iprscan-20080810-09552576.nocrc
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Query sequence: fj08803
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00049                                                 103.8    1.9e-26   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00049    1/1     160   234 ..     1    90 []   103.8  1.9e-26

Alignments of top-scoring domains:
SM00049: domain 1 of 1, from 160 to 234: score 103.8, E = 1.9e-26
                   *->pesglklddrkyflktypncFtGselVdWLldnlegqsnngptkttf
                      p+sgl+++dr+++++t+ n+++G+++VdWL+ ++eg           
     fj08803   160    PDSGLEIRDRMWLKITIANAVIGADVVDWLYTHVEG----------- 195  

                   iidreeAvhlgqaLlkeGlihhvndpnkhtFkdsknalYrFtd<-*
                    ++r+eA++++++Llk+G+++h +  nk tF++  +++Y+F+d   
     fj08803   196 FKERREARKYASSLLKHGFLRHTV--NKITFSE--QCYYVFGD    234  

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