# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofj08835.fasta.nr -Q fj08835.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fj08835, 252 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6813006 sequences Expectation_n fit: rho(ln(x))= 4.9882+/-0.000183; mu= 9.9867+/- 0.010 mean_var=68.7336+/-13.329, 0's: 30 Z-trim: 125 B-trim: 5 in 1/65 Lambda= 0.154700 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62088002|dbj|BAD92448.1| TIA1 protein variant [ ( 464) 1723 393.2 3.6e-107 gi|16198525|gb|AAH15944.1| TIA1 protein [Homo sapi ( 214) 1469 336.2 2.3e-90 gi|109103278|ref|XP_001098394.1| PREDICTED: simila ( 214) 1464 335.1 4.9e-90 gi|73969878|ref|XP_866473.1| PREDICTED: similar to ( 214) 1456 333.3 1.7e-89 gi|84579137|dbj|BAE73002.1| hypothetical protein [ ( 385) 1314 301.8 9.3e-80 gi|84579193|dbj|BAE73030.1| hypothetical protein [ ( 386) 1314 301.8 9.3e-80 gi|149036617|gb|EDL91235.1| rCG56007, isoform CRA_ ( 386) 1314 301.8 9.3e-80 gi|62702267|gb|AAX93193.1| unknown [Homo sapiens] ( 386) 1314 301.8 9.3e-80 gi|1729966|sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 ( 386) 1314 301.8 9.3e-80 gi|111308630|gb|AAI20428.1| TIA1 cytotoxic granule ( 384) 1306 300.0 3.2e-79 gi|73969892|ref|XP_866571.1| PREDICTED: similar to ( 386) 1306 300.0 3.2e-79 gi|6094480|sp|P31483.2|TIA1_HUMAN Nucleolysin TIA- ( 386) 1304 299.6 4.4e-79 gi|118101447|ref|XP_001233215.1| PREDICTED: simila ( 383) 1302 299.1 5.9e-79 gi|73969896|ref|XP_866595.1| PREDICTED: similar to ( 395) 1251 287.8 1.6e-75 gi|126304035|ref|XP_001381740.1| PREDICTED: hypoth ( 409) 1237 284.6 1.5e-74 gi|39795756|gb|AAH64164.1| TIA1 cytotoxic granule- ( 386) 1225 281.9 8.9e-74 gi|89272716|emb|CAJ83609.1| TIA1 cytotoxic granule ( 389) 1225 281.9 8.9e-74 gi|51261513|gb|AAH80105.1| MGC84540 protein [Xenop ( 389) 1224 281.7 1e-73 gi|50416510|gb|AAH77169.1| Unknown (protein for MG ( 385) 1212 279.0 6.6e-73 gi|16215606|emb|CAC95018.1| TIA-1 protein [Xenopus ( 388) 1212 279.0 6.7e-73 gi|126273037|ref|XP_001367935.1| PREDICTED: simila ( 385) 1114 257.2 2.5e-66 gi|73998712|ref|XP_865457.1| PREDICTED: similar to ( 386) 1090 251.8 1e-64 gi|194220644|ref|XP_001917255.1| PREDICTED: simila ( 300) 1041 240.8 1.7e-61 gi|27924240|gb|AAH45086.1| Tia1 protein [Xenopus l ( 427) 765 179.3 7.7e-43 gi|126273033|ref|XP_001367857.1| PREDICTED: simila ( 388) 760 178.2 1.6e-42 gi|2500589|sp|P70318|TIAR_MOUSE Nucleolysin TIAR ( ( 392) 760 178.2 1.6e-42 gi|158255404|dbj|BAF83673.1| unnamed protein produ ( 392) 760 178.2 1.6e-42 gi|28883275|gb|AAO49721.1| TIAR [Gallus gallus] ( 388) 758 177.7 2.1e-42 gi|89272470|emb|CAJ83096.1| OTTXETP00000006403 [Xe ( 389) 751 176.2 6.3e-42 gi|16215602|emb|CAC95017.1| TIAR protein [Xenopus ( 389) 741 173.9 2.9e-41 gi|148666753|gb|EDK99169.1| cytotoxic granule-asso ( 293) 666 157.1 2.6e-36 gi|159164088|pdb|2DGO|A Chain A, Solution Structur ( 115) 632 149.2 2.4e-34 gi|119620231|gb|EAW99825.1| TIA1 cytotoxic granule ( 144) 633 149.5 2.5e-34 gi|23271442|gb|AAH23813.1| Tia1 protein [Mus muscu ( 285) 633 149.7 4.2e-34 gi|73969880|ref|XP_866488.1| PREDICTED: similar to ( 285) 633 149.7 4.2e-34 gi|26390405|dbj|BAC25892.1| unnamed protein produc ( 358) 633 149.8 5e-34 gi|28883273|gb|AAO49720.1| TIA-1 [Gallus gallus] ( 372) 633 149.8 5.1e-34 gi|119620229|gb|EAW99823.1| TIA1 cytotoxic granule ( 375) 633 149.8 5.2e-34 gi|148666756|gb|EDK99172.1| cytotoxic granule-asso ( 375) 633 149.8 5.2e-34 gi|56268852|gb|AAH87064.1| Cytotoxic granule-assoc ( 375) 633 149.8 5.2e-34 gi|109103276|ref|XP_001098686.1| PREDICTED: simila ( 375) 633 149.8 5.2e-34 gi|73969894|ref|XP_852942.1| PREDICTED: similar to ( 375) 633 149.8 5.2e-34 gi|28386187|gb|AAH46812.1| Tia1 protein [Mus muscu ( 377) 633 149.8 5.2e-34 gi|73969884|ref|XP_866512.1| PREDICTED: similar to ( 380) 633 149.8 5.2e-34 gi|148666754|gb|EDK99170.1| cytotoxic granule-asso ( 385) 633 149.8 5.3e-34 gi|148666755|gb|EDK99171.1| cytotoxic granule-asso ( 122) 623 147.2 1e-33 gi|28279551|gb|AAH45368.1| Cytotoxic granule-assoc ( 386) 620 146.9 3.9e-33 gi|47217530|emb|CAG02457.1| unnamed protein produc ( 418) 617 146.3 6.7e-33 gi|187033135|emb|CAP27832.1| Hypothetical protein ( 411) 611 144.9 1.7e-32 gi|114633028|ref|XP_001154825.1| PREDICTED: simila ( 563) 585 139.2 1.2e-30 >>gi|62088002|dbj|BAD92448.1| TIA1 protein variant [Homo (464 aa) initn: 1723 init1: 1723 opt: 1723 Z-score: 2079.3 bits: 393.2 E(): 3.6e-107 Smith-Waterman score: 1723; 100.000% identity (100.000% similar) in 252 aa overlap (1-252:1-252) 10 20 30 40 50 60 fj0883 PLVSRETPLSCSHNRLNDLGGSEGQGAGPGGAAATAAAMEDEMPKTLYVGNLSRDVTEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PLVSRETPLSCSHNRLNDLGGSEGQGAGPGGAAATAAAMEDEMPKTLYVGNLSRDVTEAL 10 20 30 40 50 60 70 80 90 100 110 120 fj0883 ILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWAT 70 80 90 100 110 120 130 140 150 160 170 180 fj0883 TPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA 130 140 150 160 170 180 190 200 210 220 230 240 fj0883 TGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYECRCIGEEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYECRCIGEEK 190 200 210 220 230 240 250 fj0883 EMWNFGEKYARF :::::::::::: gi|620 EMWNFGEKYARFSCSRRLIAEIDEKQIKTTIQKSNTKQLSYDEVVNQSSPSNCTVYCGGV 250 260 270 280 290 300 >>gi|16198525|gb|AAH15944.1| TIA1 protein [Homo sapiens] (214 aa) initn: 1469 init1: 1469 opt: 1469 Z-score: 1777.6 bits: 336.2 E(): 2.3e-90 Smith-Waterman score: 1469; 100.000% identity (100.000% similar) in 214 aa overlap (39-252:1-214) 10 20 30 40 50 60 fj0883 LSCSHNRLNDLGGSEGQGAGPGGAAATAAAMEDEMPKTLYVGNLSRDVTEALILQLFSQI :::::::::::::::::::::::::::::: gi|161 MEDEMPKTLYVGNLSRDVTEALILQLFSQI 10 20 30 70 80 90 100 110 120 fj0883 GPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|161 GPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKD 40 50 60 70 80 90 130 140 150 160 170 180 fj0883 TSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|161 TSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG 100 110 120 130 140 150 190 200 210 220 230 240 fj0883 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYECRCIGEEKEMWNFGEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|161 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYECRCIGEEKEMWNFGEK 160 170 180 190 200 210 250 fj0883 YARF :::: gi|161 YARF >>gi|109103278|ref|XP_001098394.1| PREDICTED: similar to (214 aa) initn: 1464 init1: 1464 opt: 1464 Z-score: 1771.5 bits: 335.1 E(): 4.9e-90 Smith-Waterman score: 1464; 99.533% identity (100.000% similar) in 214 aa overlap (39-252:1-214) 10 20 30 40 50 60 fj0883 LSCSHNRLNDLGGSEGQGAGPGGAAATAAAMEDEMPKTLYVGNLSRDVTEALILQLFSQI :::::::::::::::::::::::::::::: gi|109 MEDEMPKTLYVGNLSRDVTEALILQLFSQI 10 20 30 70 80 90 100 110 120 fj0883 GPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKD 40 50 60 70 80 90 130 140 150 160 170 180 fj0883 TSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG 100 110 120 130 140 150 190 200 210 220 230 240 fj0883 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYECRCIGEEKEMWNFGEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYECRCIGEEKEMWNFGEK 160 170 180 190 200 210 250 fj0883 YARF :.:: gi|109 YTRF >>gi|73969878|ref|XP_866473.1| PREDICTED: similar to Nuc (214 aa) initn: 1456 init1: 1456 opt: 1456 Z-score: 1761.9 bits: 333.3 E(): 1.7e-89 Smith-Waterman score: 1456; 99.065% identity (100.000% similar) in 214 aa overlap (39-252:1-214) 10 20 30 40 50 60 fj0883 LSCSHNRLNDLGGSEGQGAGPGGAAATAAAMEDEMPKTLYVGNLSRDVTEALILQLFSQI :::::::::::::::::::::::::::::: gi|739 MEDEMPKTLYVGNLSRDVTEALILQLFSQI 10 20 30 70 80 90 100 110 120 fj0883 GPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKD :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|739 GPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKD 40 50 60 70 80 90 130 140 150 160 170 180 fj0883 TSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG 100 110 120 130 140 150 190 200 210 220 230 240 fj0883 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYECRCIGEEKEMWNFGEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYECRCIGEEKEMWNFGEK 160 170 180 190 200 210 250 fj0883 YARF :.:: gi|739 YTRF >>gi|84579137|dbj|BAE73002.1| hypothetical protein [Maca (385 aa) initn: 1314 init1: 1314 opt: 1314 Z-score: 1587.1 bits: 301.8 E(): 9.3e-80 Smith-Waterman score: 1314; 100.000% identity (100.000% similar) in 194 aa overlap (39-232:1-194) 10 20 30 40 50 60 fj0883 LSCSHNRLNDLGGSEGQGAGPGGAAATAAAMEDEMPKTLYVGNLSRDVTEALILQLFSQI :::::::::::::::::::::::::::::: gi|845 MEDEMPKTLYVGNLSRDVTEALILQLFSQI 10 20 30 70 80 90 100 110 120 fj0883 GPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|845 GPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKD 40 50 60 70 80 90 130 140 150 160 170 180 fj0883 TSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|845 TSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG 100 110 120 130 140 150 190 200 210 220 230 240 fj0883 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYECRCIGEEKEMWNFGEK :::::::::::::::::::::::::::::::::::::::::::: gi|845 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSS 160 170 180 190 200 210 250 fj0883 YARF gi|845 PSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVN 220 230 240 250 260 270 >>gi|84579193|dbj|BAE73030.1| hypothetical protein [Maca (386 aa) initn: 1314 init1: 1314 opt: 1314 Z-score: 1587.1 bits: 301.8 E(): 9.3e-80 Smith-Waterman score: 1314; 100.000% identity (100.000% similar) in 194 aa overlap (39-232:1-194) 10 20 30 40 50 60 fj0883 LSCSHNRLNDLGGSEGQGAGPGGAAATAAAMEDEMPKTLYVGNLSRDVTEALILQLFSQI :::::::::::::::::::::::::::::: gi|845 MEDEMPKTLYVGNLSRDVTEALILQLFSQI 10 20 30 70 80 90 100 110 120 fj0883 GPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|845 GPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKD 40 50 60 70 80 90 130 140 150 160 170 180 fj0883 TSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|845 TSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG 100 110 120 130 140 150 190 200 210 220 230 240 fj0883 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYECRCIGEEKEMWNFGEK :::::::::::::::::::::::::::::::::::::::::::: gi|845 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSS 160 170 180 190 200 210 250 fj0883 YARF gi|845 PSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVN 220 230 240 250 260 270 >>gi|149036617|gb|EDL91235.1| rCG56007, isoform CRA_a [R (386 aa) initn: 1314 init1: 1314 opt: 1314 Z-score: 1587.1 bits: 301.8 E(): 9.3e-80 Smith-Waterman score: 1314; 100.000% identity (100.000% similar) in 194 aa overlap (39-232:1-194) 10 20 30 40 50 60 fj0883 LSCSHNRLNDLGGSEGQGAGPGGAAATAAAMEDEMPKTLYVGNLSRDVTEALILQLFSQI :::::::::::::::::::::::::::::: gi|149 MEDEMPKTLYVGNLSRDVTEALILQLFSQI 10 20 30 70 80 90 100 110 120 fj0883 GPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKD 40 50 60 70 80 90 130 140 150 160 170 180 fj0883 TSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG 100 110 120 130 140 150 190 200 210 220 230 240 fj0883 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYECRCIGEEKEMWNFGEK :::::::::::::::::::::::::::::::::::::::::::: gi|149 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSS 160 170 180 190 200 210 250 fj0883 YARF gi|149 PGNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFIRFSSHESAAHAIVSVN 220 230 240 250 260 270 >>gi|62702267|gb|AAX93193.1| unknown [Homo sapiens] (386 aa) initn: 1314 init1: 1314 opt: 1314 Z-score: 1587.1 bits: 301.8 E(): 9.3e-80 Smith-Waterman score: 1314; 100.000% identity (100.000% similar) in 194 aa overlap (39-232:1-194) 10 20 30 40 50 60 fj0883 LSCSHNRLNDLGGSEGQGAGPGGAAATAAAMEDEMPKTLYVGNLSRDVTEALILQLFSQI :::::::::::::::::::::::::::::: gi|627 MEDEMPKTLYVGNLSRDVTEALILQLFSQI 10 20 30 70 80 90 100 110 120 fj0883 GPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|627 GPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKD 40 50 60 70 80 90 130 140 150 160 170 180 fj0883 TSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|627 TSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG 100 110 120 130 140 150 190 200 210 220 230 240 fj0883 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYECRCIGEEKEMWNFGEK :::::::::::::::::::::::::::::::::::::::::::: gi|627 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSS 160 170 180 190 200 210 250 fj0883 YARF gi|627 PSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVN 220 230 240 250 260 270 >>gi|1729966|sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 (RNA (386 aa) initn: 1314 init1: 1314 opt: 1314 Z-score: 1587.1 bits: 301.8 E(): 9.3e-80 Smith-Waterman score: 1314; 100.000% identity (100.000% similar) in 194 aa overlap (39-232:1-194) 10 20 30 40 50 60 fj0883 LSCSHNRLNDLGGSEGQGAGPGGAAATAAAMEDEMPKTLYVGNLSRDVTEALILQLFSQI :::::::::::::::::::::::::::::: gi|172 MEDEMPKTLYVGNLSRDVTEALILQLFSQI 10 20 30 70 80 90 100 110 120 fj0883 GPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 GPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKD 40 50 60 70 80 90 130 140 150 160 170 180 fj0883 TSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 TSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG 100 110 120 130 140 150 190 200 210 220 230 240 fj0883 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYECRCIGEEKEMWNFGEK :::::::::::::::::::::::::::::::::::::::::::: gi|172 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSS 160 170 180 190 200 210 250 fj0883 YARF gi|172 PNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVN 220 230 240 250 260 270 >>gi|111308630|gb|AAI20428.1| TIA1 cytotoxic granule-ass (384 aa) initn: 1306 init1: 1306 opt: 1306 Z-score: 1577.4 bits: 300.0 E(): 3.2e-79 Smith-Waterman score: 1306; 99.485% identity (100.000% similar) in 194 aa overlap (39-232:1-194) 10 20 30 40 50 60 fj0883 LSCSHNRLNDLGGSEGQGAGPGGAAATAAAMEDEMPKTLYVGNLSRDVTEALILQLFSQI :::::::::::::::::::::::::::::: gi|111 MEDEMPKTLYVGNLSRDVTEALILQLFSQI 10 20 30 70 80 90 100 110 120 fj0883 GPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKD :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|111 GPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKD 40 50 60 70 80 90 130 140 150 160 170 180 fj0883 TSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 TSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG 100 110 120 130 140 150 190 200 210 220 230 240 fj0883 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYECRCIGEEKEMWNFGEK :::::::::::::::::::::::::::::::::::::::::::: gi|111 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSS 160 170 180 190 200 210 250 fj0883 YARF gi|111 PSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVN 220 230 240 250 260 270 252 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sun Aug 10 09:59:36 2008 done: Sun Aug 10 10:02:21 2008 Total Scan time: 691.050 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]