# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofj10535.fasta.nr -Q fj10535.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fj10535, 458 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6824552 sequences Expectation_n fit: rho(ln(x))= 4.6922+/-0.000184; mu= 13.1976+/- 0.010 mean_var=69.4976+/-13.304, 0's: 36 Z-trim: 37 B-trim: 129 in 1/63 Lambda= 0.153847 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|45550060|gb|AAS67876.1| lysosomal-associated me ( 411) 2689 606.0 4.9e-171 gi|1195542|gb|AAB35426.1| lysosome-associated memb ( 410) 2564 578.2 1.1e-162 gi|1708854|sp|P13473.2|LAMP2_HUMAN Lysosome-associ ( 410) 2547 574.5 1.5e-161 gi|55732398|emb|CAH92900.1| hypothetical protein [ ( 410) 2519 568.3 1.1e-159 gi|1809215|gb|AAB41647.1| lysosomal membrane glyco ( 410) 2507 565.6 7e-159 gi|307110|gb|AAA60383.1| lysosomal membrane glycop ( 408) 2502 564.5 1.5e-158 gi|67970736|dbj|BAE01710.1| unnamed protein produc ( 410) 2486 560.9 1.8e-157 gi|435756|gb|AAB28483.1| lysosomal membrane glycop ( 410) 2440 550.7 2.1e-154 gi|74008245|ref|XP_851885.1| PREDICTED: similar to ( 412) 2296 518.8 8.8e-145 gi|109132122|ref|XP_001084005.1| PREDICTED: lysoso ( 480) 2283 515.9 7.3e-144 gi|74008241|ref|XP_864542.1| PREDICTED: similar to ( 411) 2173 491.5 1.5e-136 gi|74008247|ref|XP_864590.1| PREDICTED: similar to ( 411) 2157 487.9 1.7e-135 gi|194044906|ref|XP_001926547.1| PREDICTED: simila ( 411) 2132 482.4 8e-134 gi|194044904|ref|XP_001926493.1| PREDICTED: simila ( 411) 2113 478.1 1.5e-132 gi|74353978|gb|AAI02820.1| Lysosomal-associated me ( 407) 2062 466.8 3.8e-129 gi|164420738|ref|NP_001106715.1| lysosomal-associa ( 407) 2046 463.3 4.4e-128 gi|194228250|ref|XP_001493687.2| PREDICTED: simila ( 568) 2044 463.0 7.7e-128 gi|1346462|sp|P49130.1|LAMP2_CRIGR Lysosome-associ ( 410) 1792 406.9 4.2e-111 gi|38303859|gb|AAH61990.1| Lysosomal-associated me ( 411) 1665 378.7 1.3e-102 gi|126382|sp|P17046.2|LAMP2_RAT Lysosome-associate ( 411) 1649 375.2 1.5e-101 gi|149637198|ref|XP_001510101.1| PREDICTED: simila ( 454) 1644 374.1 3.5e-101 gi|205169|gb|AAA41526.1| lysosomal membrane glycop ( 393) 1620 368.7 1.3e-99 gi|149060047|gb|EDM10863.1| lysosomal membrane gly ( 368) 1611 366.7 4.8e-99 gi|1094569|prf||2106261A lysosome-associated membr ( 268) 1585 360.8 2.1e-97 gi|126342323|ref|XP_001372839.1| PREDICTED: simila ( 428) 1532 349.2 1e-93 gi|149060050|gb|EDM10866.1| lysosomal membrane gly ( 367) 1494 340.7 3.1e-91 gi|149060048|gb|EDM10864.1| lysosomal membrane gly ( 367) 1493 340.5 3.6e-91 gi|26347041|dbj|BAC37169.1| unnamed protein produc ( 416) 1145 263.3 7.1e-68 gi|76780167|gb|AAI06650.1| LOC733384 protein [Xeno ( 419) 1077 248.2 2.5e-63 gi|51950024|gb|AAH82411.1| MGC82091 protein [Xenop ( 415) 1072 247.1 5.4e-63 gi|169642731|gb|AAI60795.1| Lamp2 protein [Xenopus ( 388) 1058 244.0 4.4e-62 gi|74144843|dbj|BAE27393.1| unnamed protein produc ( 415) 1031 238.0 2.9e-60 gi|26328735|dbj|BAC28106.1| unnamed protein produc ( 415) 1028 237.3 4.7e-60 gi|74192885|dbj|BAE34951.1| unnamed protein produc ( 415) 1027 237.1 5.4e-60 gi|26339188|dbj|BAC33265.1| unnamed protein produc ( 415) 1027 237.1 5.4e-60 gi|123232922|emb|CAM17143.1| lysosomal membrane gl ( 415) 1027 237.1 5.4e-60 gi|74198316|dbj|BAE35325.1| unnamed protein produc ( 415) 1027 237.1 5.4e-60 gi|12848716|dbj|BAB28062.1| unnamed protein produc ( 415) 1026 236.9 6.4e-60 gi|126381|sp|P17047.1|LAMP2_MOUSE Lysosome-associa ( 415) 1020 235.6 1.6e-59 gi|90075530|dbj|BAE87445.1| unnamed protein produc ( 174) 995 229.7 4e-58 gi|198800|gb|AAA39429.1| lysosomal membrane glycop ( 230) 981 226.7 4.2e-57 gi|110645482|gb|AAI18743.1| Lamp2 protein [Xenopus ( 339) 891 206.8 5.7e-51 gi|149060049|gb|EDM10865.1| lysosomal membrane gly ( 188) 875 203.1 4.4e-50 gi|18204186|gb|AAH21288.1| Lysosomal-associated me ( 417) 877 203.8 5.8e-50 gi|148697070|gb|EDL29017.1| lysosomal membrane gly ( 188) 872 202.4 7e-50 gi|109121337|ref|XP_001087801.1| PREDICTED: lysoso ( 416) 873 202.9 1.1e-49 gi|126376|sp|P11279.2|LAMP1_HUMAN Lysosome-associa ( 416) 863 200.7 4.9e-49 gi|193787339|dbj|BAG52545.1| unnamed protein produ ( 395) 854 198.7 1.9e-48 gi|307132|gb|AAA59524.1| membrane glycoprotein ( 385) 850 197.8 3.5e-48 gi|114650748|ref|XP_001144542.1| PREDICTED: simila ( 375) 847 197.1 5.4e-48 >>gi|45550060|gb|AAS67876.1| lysosomal-associated membra (411 aa) initn: 2689 init1: 2689 opt: 2689 Z-score: 3225.9 bits: 606.0 E(): 4.9e-171 Smith-Waterman score: 2689; 100.000% identity (100.000% similar) in 411 aa overlap (48-458:1-411) 20 30 40 50 60 70 fj1053 LTQVQRAFSLVLQLLLYRRRRRRRRLLCGVMVCFRLFPVPGSGLVLVCLVLGAVRSYALE :::::::::::::::::::::::::::::: gi|455 MVCFRLFPVPGSGLVLVCLVLGAVRSYALE 10 20 30 80 90 100 110 120 130 fj1053 LNLTDSENATCLYAKWQMNFTVRYETTNKTYKTVTISDHGTVTYNGSICGDDQNGPKIAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|455 LNLTDSENATCLYAKWQMNFTVRYETTNKTYKTVTISDHGTVTYNGSICGDDQNGPKIAV 40 50 60 70 80 90 140 150 160 170 180 190 fj1053 QFGPGFSWIANFTKAASTYSIDSVSFSYNTGDNTTFPDAEDKGILTVDELLAIRIPLNDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|455 QFGPGFSWIANFTKAASTYSIDSVSFSYNTGDNTTFPDAEDKGILTVDELLAIRIPLNDL 100 110 120 130 140 150 200 210 220 230 240 250 fj1053 FRCNSLSTLEKNDVVQHYWDVLVQAFVQNGTVSTNEFLCDKDKTSTVAPTIHTTVPSPTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|455 FRCNSLSTLEKNDVVQHYWDVLVQAFVQNGTVSTNEFLCDKDKTSTVAPTIHTTVPSPTT 160 170 180 190 200 210 260 270 280 290 300 310 fj1053 TPTPKEKPEAGTYSVNNGNDTCLLATMGLQLNITQDKVASVININPNTTHSTGSCRSHTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|455 TPTPKEKPEAGTYSVNNGNDTCLLATMGLQLNITQDKVASVININPNTTHSTGSCRSHTA 220 230 240 250 260 270 320 330 340 350 360 370 fj1053 LLRLNSSTIKYLDFVFAVKNENRFYLKEVNISMYLVNGSVFSIANNNLSYWDAPLGSSYM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|455 LLRLNSSTIKYLDFVFAVKNENRFYLKEVNISMYLVNGSVFSIANNNLSYWDAPLGSSYM 280 290 300 310 320 330 380 390 400 410 420 430 fj1053 CNKEQTVSVSGAFQINTFDLRVQPFNVTQGKYSTAEECSADSDLNFLIPVAVGVALGFLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|455 CNKEQTVSVSGAFQINTFDLRVQPFNVTQGKYSTAEECSADSDLNFLIPVAVGVALGFLI 340 350 360 370 380 390 440 450 fj1053 IVVFISYMIGRRKSRTGYQSV ::::::::::::::::::::: gi|455 IVVFISYMIGRRKSRTGYQSV 400 410 >>gi|1195542|gb|AAB35426.1| lysosome-associated membrane (410 aa) initn: 2585 init1: 2438 opt: 2564 Z-score: 3075.9 bits: 578.2 E(): 1.1e-162 Smith-Waterman score: 2564; 95.134% identity (98.540% similar) in 411 aa overlap (48-458:1-410) 20 30 40 50 60 70 fj1053 LTQVQRAFSLVLQLLLYRRRRRRRRLLCGVMVCFRLFPVPGSGLVLVCLVLGAVRSYALE :::::::::::::::::::::::::::::: gi|119 MVCFRLFPVPGSGLVLVCLVLGAVRSYALE 10 20 30 80 90 100 110 120 130 fj1053 LNLTDSENATCLYAKWQMNFTVRYETTNKTYKTVTISDHGTVTYNGSICGDDQNGPKIAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LNLTDSENATCLYAKWQMNFTVRYETTNKTYKTVTISDHGTVTYNGSICGDDQNGPKIAV 40 50 60 70 80 90 140 150 160 170 180 190 fj1053 QFGPGFSWIANFTKAASTYSIDSVSFSYNTGDNTTFPDAEDKGILTVDELLAIRIPLNDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QFGPGFSWIANFTKAASTYSIDSVSFSYNTGDNTTFPDAEDKGILTVDELLAIRIPLNDL 100 110 120 130 140 150 200 210 220 230 240 250 fj1053 FRCNSLSTLEKNDVVQHYWDVLVQAFVQNGTVSTNEFLCDKDKTSTVAPTIHTTVPSPTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FRCNSLSTLEKNDVVQHYWDVLVQAFVQNGTVSTNEFLCDKDKTSTVAPTIHTTVPSPTT 160 170 180 190 200 210 260 270 280 290 300 310 fj1053 TPTPKEKPEAGTYSVNNGNDTCLLATMGLQLNITQDKVASVININPNTTHSTGSCRSHTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TPTPKEKPEAGTYSVNNGNDTCLLATMGLQLNITQDKVASVININPNTTHSTGSCRSHTA 220 230 240 250 260 270 320 330 340 350 360 370 fj1053 LLRLNSSTIKYLDFVFAVKNENRFYLKEVNISMYLVNGSVFSIANNNLSYWDAPLGSSYM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LLRLNSSTIKYLDFVFAVKNENRFYLKEVNISMYLVNGSVFSIANNNLSYWDAPLGSSYM 280 290 300 310 320 330 380 390 400 410 420 430 fj1053 CNKEQTVSVSGAFQINTFDLRVQPFNVTQGKYSTAEECSADSDLNFLIPVAVGVALGFLI :::::::::::::::::::::::::::::::::::.::: :.: ..:::. ::..:. :: gi|119 CNKEQTVSVSGAFQINTFDLRVQPFNVTQGKYSTAQECSLDDD-TILIPIIVGAGLSGLI 340 350 360 370 380 440 450 fj1053 IVVFISYMIGRRKSRTGYQSV ::. :.:.:::::: .:::.. gi|119 IVIVIAYVIGRRKSYAGYQTL 390 400 410 >>gi|1708854|sp|P13473.2|LAMP2_HUMAN Lysosome-associated (410 aa) initn: 2545 init1: 2441 opt: 2547 Z-score: 3055.5 bits: 574.5 E(): 1.5e-161 Smith-Waterman score: 2547; 94.377% identity (99.022% similar) in 409 aa overlap (48-456:1-408) 20 30 40 50 60 70 fj1053 LTQVQRAFSLVLQLLLYRRRRRRRRLLCGVMVCFRLFPVPGSGLVLVCLVLGAVRSYALE :::::::::::::::::::::::::::::: gi|170 MVCFRLFPVPGSGLVLVCLVLGAVRSYALE 10 20 30 80 90 100 110 120 130 fj1053 LNLTDSENATCLYAKWQMNFTVRYETTNKTYKTVTISDHGTVTYNGSICGDDQNGPKIAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 LNLTDSENATCLYAKWQMNFTVRYETTNKTYKTVTISDHGTVTYNGSICGDDQNGPKIAV 40 50 60 70 80 90 140 150 160 170 180 190 fj1053 QFGPGFSWIANFTKAASTYSIDSVSFSYNTGDNTTFPDAEDKGILTVDELLAIRIPLNDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 QFGPGFSWIANFTKAASTYSIDSVSFSYNTGDNTTFPDAEDKGILTVDELLAIRIPLNDL 100 110 120 130 140 150 200 210 220 230 240 250 fj1053 FRCNSLSTLEKNDVVQHYWDVLVQAFVQNGTVSTNEFLCDKDKTSTVAPTIHTTVPSPTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 FRCNSLSTLEKNDVVQHYWDVLVQAFVQNGTVSTNEFLCDKDKTSTVAPTIHTTVPSPTT 160 170 180 190 200 210 260 270 280 290 300 310 fj1053 TPTPKEKPEAGTYSVNNGNDTCLLATMGLQLNITQDKVASVININPNTTHSTGSCRSHTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 TPTPKEKPEAGTYSVNNGNDTCLLATMGLQLNITQDKVASVININPNTTHSTGSCRSHTA 220 230 240 250 260 270 320 330 340 350 360 370 fj1053 LLRLNSSTIKYLDFVFAVKNENRFYLKEVNISMYLVNGSVFSIANNNLSYWDAPLGSSYM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 LLRLNSSTIKYLDFVFAVKNENRFYLKEVNISMYLVNGSVFSIANNNLSYWDAPLGSSYM 280 290 300 310 320 330 380 390 400 410 420 430 fj1053 CNKEQTVSVSGAFQINTFDLRVQPFNVTQGKYSTAEECSADSDLNFLIPVAVGVALGFLI :::::::::::::::::::::::::::::::::::..::::.: :::.:.:::.::. .. gi|170 CNKEQTVSVSGAFQINTFDLRVQPFNVTQGKYSTAQDCSADDD-NFLVPIAVGAALAGVL 340 350 360 370 380 440 450 fj1053 IVVFISYMIGRRKSRTGYQSV :.:...:.:: .. ..::. gi|170 ILVLLAYFIGLKHHHAGYEQF 390 400 410 >>gi|55732398|emb|CAH92900.1| hypothetical protein [Pong (410 aa) initn: 2540 init1: 2393 opt: 2519 Z-score: 3022.0 bits: 568.3 E(): 1.1e-159 Smith-Waterman score: 2519; 92.944% identity (98.054% similar) in 411 aa overlap (48-458:1-410) 20 30 40 50 60 70 fj1053 LTQVQRAFSLVLQLLLYRRRRRRRRLLCGVMVCFRLFPVPGSGLVLVCLVLGAVRSYALE ::::::::::::::::::::::::.::::: gi|557 MVCFRLFPVPGSGLVLVCLVLGAVQSYALE 10 20 30 80 90 100 110 120 130 fj1053 LNLTDSENATCLYAKWQMNFTVRYETTNKTYKTVTISDHGTVTYNGSICGDDQNGPKIAV :::::::.::::::::::::::::::::::::::::::.::::::::.:::::::::::: gi|557 LNLTDSEKATCLYAKWQMNFTVRYETTNKTYKTVTISDRGTVTYNGSVCGDDQNGPKIAV 40 50 60 70 80 90 140 150 160 170 180 190 fj1053 QFGPGFSWIANFTKAASTYSIDSVSFSYNTGDNTTFPDAEDKGILTVDELLAIRIPLNDL :::::::::::::::::::::::.::::: ::::::::::::::::::: :::.:::::: gi|557 QFGPGFSWIANFTKAASTYSIDSISFSYNIGDNTTFPDAEDKGILTVDEPLAIKIPLNDL 100 110 120 130 140 150 200 210 220 230 240 250 fj1053 FRCNSLSTLEKNDVVQHYWDVLVQAFVQNGTVSTNEFLCDKDKTSTVAPTIHTTVPSPTT ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|557 FRCNSLSTLEKNDVVQHYWDVLVQAFVQNGTVSTNEFLCDKDKTSTVAPTVHTTVPSPTT 160 170 180 190 200 210 260 270 280 290 300 310 fj1053 TPTPKEKPEAGTYSVNNGNDTCLLATMGLQLNITQDKVASVININPNTTHSTGSCRSHTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 TPTPKEKPEAGTYSVNNGNDTCLLATMGLQLNITQDKVASVININPNTTHSTGSCRSHTA 220 230 240 250 260 270 320 330 340 350 360 370 fj1053 LLRLNSSTIKYLDFVFAVKNENRFYLKEVNISMYLVNGSVFSIANNNLSYWDAPLGSSYM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 LLRLNSSTIKYLDFVFAVKNENRFYLKEVNISMYLVNGSVFSIANNNLSYWDAPLGSSYM 280 290 300 310 320 330 380 390 400 410 420 430 fj1053 CNKEQTVSVSGAFQINTFDLRVQPFNVTQGKYSTAEECSADSDLNFLIPVAVGVALGFLI :::::::::::::::::::::::::::::::::::.::: :.: ..:::. ::..:. :: gi|557 CNKEQTVSVSGAFQINTFDLRVQPFNVTQGKYSTAQECSLDDD-TILIPIIVGAGLSGLI 340 350 360 370 380 440 450 fj1053 IVVFISYMIGRRKSRTGYQSV ::. :.:.:::::: .:::.. gi|557 IVIVIAYVIGRRKSYAGYQTL 390 400 410 >>gi|1809215|gb|AAB41647.1| lysosomal membrane glycoprot (410 aa) initn: 2505 init1: 2401 opt: 2507 Z-score: 3007.6 bits: 565.6 E(): 7e-159 Smith-Waterman score: 2507; 93.154% identity (97.800% similar) in 409 aa overlap (48-456:1-408) 20 30 40 50 60 70 fj1053 LTQVQRAFSLVLQLLLYRRRRRRRRLLCGVMVCFRLFPVPGSGLVLVCLVLGAVRSYALE :::::::::::::::::::::::::::::: gi|180 MVCFRLFPVPGSGLVLVCLVLGAVRSYALE 10 20 30 80 90 100 110 120 130 fj1053 LNLTDSENATCLYAKWQMNFTVRYETTNKTYKTVTISDHGTVTYNGSICGDDQNGPKIAV ::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::: gi|180 LNLTDSENATCLYAKWQMNFTVRYETTNKTYKTVTISVHGTVTYNGSICGDDQNGPKIAV 40 50 60 70 80 90 140 150 160 170 180 190 fj1053 QFGPGFSWIANFTKAASTYSIDSVSFSYNTGDNTTFPDAEDKGILTVDELLAIRIPLNDL :::::::::::::::::::: ::::::::::::::::::::::::::::::: ::::::: gi|180 QFGPGFSWIANFTKAASTYSNDSVSFSYNTGDNTTFPDAEDKGILTVDELLAYRIPLNDL 100 110 120 130 140 150 200 210 220 230 240 250 fj1053 FRCNSLSTLEKNDVVQHYWDVLVQAFVQNGTVSTNEFLCDKDKTSTVAPTIHTTVPSPTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|180 FRCNSLSTLEKNDVVQHYWDVLVQAFVQNGTVSTNEFLCDKDKTSTVAPTIHTTVPSPTT 160 170 180 190 200 210 260 270 280 290 300 310 fj1053 TPTPKEKPEAGTYSVNNGNDTCLLATMGLQLNITQDKVASVININPNTTHSTGSCRSHTA ::::::::: ::::::::::::: :::::::::::::::::::::::::::::::::::: gi|180 TPTPKEKPEPGTYSVNNGNDTCLRATMGLQLNITQDKVASVININPNTTHSTGSCRSHTA 220 230 240 250 260 270 320 330 340 350 360 370 fj1053 LLRLNSSTIKYLDFVFAVKNENRFYLKEVNISMYLVNGSVFSIANNNLSYWDAPLGSSYM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|180 LLRLNSSTIKYLDFVFAVKNENRFYLKEVNISMYLVNGSVFSIANNNLSYWDAPLGSSYM 280 290 300 310 320 330 380 390 400 410 420 430 fj1053 CNKEQTVSVSGAFQINTFDLRVQPFNVTQGKYSTAEECSADSDLNFLIPVAVGVALGFLI :::::::::::::::::::::::::::::::::::..::::.: :::.:.:::.::. .. gi|180 CNKEQTVSVSGAFQINTFDLRVQPFNVTQGKYSTAQDCSADDD-NFLVPIAVGAALAGVL 340 350 360 370 380 440 450 fj1053 IVVFISYMIGRRKSRTGYQSV :.:...:.:: .. ..::. gi|180 ILVLLAYFIGLKHHHAGYEQF 390 400 410 >>gi|307110|gb|AAA60383.1| lysosomal membrane glycoprote (408 aa) initn: 2500 init1: 2114 opt: 2502 Z-score: 3001.6 bits: 564.5 E(): 1.5e-158 Smith-Waterman score: 2502; 93.399% identity (98.044% similar) in 409 aa overlap (48-456:1-406) 20 30 40 50 60 70 fj1053 LTQVQRAFSLVLQLLLYRRRRRRRRLLCGVMVCFRLFPVPGSGLVLVCLVLGAVRSYALE :::::::::::::::::::::::::::::: gi|307 MVCFRLFPVPGSGLVLVCLVLGAVRSYALE 10 20 30 80 90 100 110 120 130 fj1053 LNLTDSENATCLYAKWQMNFTVRYETTNKTYKTVTISDHGTVTYNGSICGDDQNGPKIAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|307 LNLTDSENATCLYAKWQMNFTVRYETTNKTYKTVTISDHGTVTYNGSICGDDQNGPKIAV 40 50 60 70 80 90 140 150 160 170 180 190 fj1053 QFGPGFSWIANFTKAASTYSIDSVSFSYNTGDNTTFPDAEDKGILTVDELLAIRIPLNDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|307 QFGPGFSWIANFTKAASTYSIDSVSFSYNTGDNTTFPDAEDKGILTVDELLAIRIPLNDL 100 110 120 130 140 150 200 210 220 230 240 250 fj1053 FRCNSLSTLEKNDVVQHYWDVLVQAFVQNGTVSTNEFLCDKDKTSTVAPTIHTTVPSPTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|307 FRCNSLSTLEKNDVVQHYWDVLVQAFVQNGTVSTNEFLCDKDKTSTVAPTIHTTVPSPTT 160 170 180 190 200 210 260 270 280 290 300 310 fj1053 TPTPKEKPEAGTYSVNNGNDTCLLATMGLQLNITQDKVASVININPNTTHSTGSCRSHTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|307 TPTPKEKPEAGTYSVNNGNDTCLLATMGLQLNITQDKVASVININPNTTHSTGSCRSHTA 220 230 240 250 260 270 320 330 340 350 360 370 fj1053 LLRLNSSTIKYLDFVFAVKNENRFYLKEVNISMYLVNGSVFSIANNNLSYWDAPLGSSYM ::::::::::::::::::::::::::::::::::::::::::::::::::: : :::: gi|307 LLRLNSSTIKYLDFVFAVKNENRFYLKEVNISMYLVNGSVFSIANNNLSYWMPP--SSYM 280 290 300 310 320 380 390 400 410 420 430 fj1053 CNKEQTVSVSGAFQINTFDLRVQPFNVTQGKYSTAEECSADSDLNFLIPVAVGVALGFLI :::::::::::::::::::::::::::::::::::..::::.: :::.:.:::.::. .. gi|307 CNKEQTVSVSGAFQINTFDLRVQPFNVTQGKYSTAQDCSADDD-NFLVPIAVGAALAGVL 330 340 350 360 370 380 440 450 fj1053 IVVFISYMIGRRKSRTGYQSV :.:...:.:: .. ..::. gi|307 ILVLLAYFIGLKHHHAGYEQF 390 400 >>gi|67970736|dbj|BAE01710.1| unnamed protein product [M (410 aa) initn: 2484 init1: 2377 opt: 2486 Z-score: 2982.4 bits: 560.9 E(): 1.8e-157 Smith-Waterman score: 2486; 91.443% identity (98.778% similar) in 409 aa overlap (48-456:1-408) 20 30 40 50 60 70 fj1053 LTQVQRAFSLVLQLLLYRRRRRRRRLLCGVMVCFRLFPVPGSGLVLVCLVLGAVRSYALE ::::::::::::::::::::::::.::::: gi|679 MVCFRLFPVPGSGLVLVCLVLGAVQSYALE 10 20 30 80 90 100 110 120 130 fj1053 LNLTDSENATCLYAKWQMNFTVRYETTNKTYKTVTISDHGTVTYNGSICGDDQNGPKIAV :::::: .::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|679 LNLTDSGKATCLYAKWQMNFTVRYETTNKTYKTVTISDRGTVTYNGSICGDDQNGPKIAV 40 50 60 70 80 90 140 150 160 170 180 190 fj1053 QFGPGFSWIANFTKAASTYSIDSVSFSYNTGDNTTFPDAEDKGILTVDELLAIRIPLNDL ::::::::::::.::::::::::.::::::::::::::::::::.::::::::.:::::: gi|679 QFGPGFSWIANFSKAASTYSIDSISFSYNTGDNTTFPDAEDKGIITVDELLAIKIPLNDL 100 110 120 130 140 150 200 210 220 230 240 250 fj1053 FRCNSLSTLEKNDVVQHYWDVLVQAFVQNGTVSTNEFLCDKDKTSTVAPTIHTTVPSPTT ::::::::::::::::.:::::::::::::::::::::::.::::::::::::::::::: gi|679 FRCNSLSTLEKNDVVQNYWDVLVQAFVQNGTVSTNEFLCDEDKTSTVAPTIHTTVPSPTT 160 170 180 190 200 210 260 270 280 290 300 310 fj1053 TPTPKEKPEAGTYSVNNGNDTCLLATMGLQLNITQDKVASVININPNTTHSTGSCRSHTA :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|679 TPTPKEKPEAGTYSVNNGNETCLLATMGLQLNITQDKVASVININPNTTHSTGSCRSHTA 220 230 240 250 260 270 320 330 340 350 360 370 fj1053 LLRLNSSTIKYLDFVFAVKNENRFYLKEVNISMYLVNGSVFSIANNNLSYWDAPLGSSYM ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|679 LLRLNSSTIKYLDFVFAVKNENRFYLKEVNVSMYLVNGSVFSIANNNLSYWDAPLGSSYM 280 290 300 310 320 330 380 390 400 410 420 430 fj1053 CNKEQTVSVSGAFQINTFDLRVQPFNVTQGKYSTAEECSADSDLNFLIPVAVGVALGFLI :::::::::::::::::::::::::::::::::::..::::.: :::.:.:::.::. .. gi|679 CNKEQTVSVSGAFQINTFDLRVQPFNVTQGKYSTAQDCSADDD-NFLVPIAVGAALAGVL 340 350 360 370 380 440 450 fj1053 IVVFISYMIGRRKSRTGYQSV :.:...:.:: .. ..::. gi|679 ILVLLAYFIGLKRHHAGYEQF 390 400 410 >>gi|435756|gb|AAB28483.1| lysosomal membrane glycoprote (410 aa) initn: 2440 init1: 1635 opt: 2440 Z-score: 2927.2 bits: 550.7 E(): 2.1e-154 Smith-Waterman score: 2440; 92.233% identity (96.117% similar) in 412 aa overlap (48-458:1-410) 20 30 40 50 60 70 fj1053 LTQVQRAFSLVLQLLLYRRRRRRRRLLCGVMVCFRLFPV-PGSGLVLVCLVLGAVRSYAL ::::::: : :::::::::::::::: gi|435 MVCFRLFRFRSGLRLVLVCLVLGAVRSYAL 10 20 30 80 90 100 110 120 130 fj1053 ELNLTDSENATCLYAKWQMNFTVRYETTNKTYKTVTISDHGTVTYNGSICGDDQNGPKIA ::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: gi|435 ELNLTDSENATCLYAKWQMNFTVGYETTNKTYKTVTISDHGTVTYNGSICGDDQNGPKIA 40 50 60 70 80 90 140 150 160 170 180 190 fj1053 VQFGPGFSWIANFTKAASTYSIDSVSFSYNTGDNTTFPDAEDKGILTVDELLAIRIPLND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|435 VQFGPGFSWIANFTKAASTYSIDSVSFSYNTGDNTTFPDAEDKGILTVDELLAIRIPLND 100 110 120 130 140 150 200 210 220 230 240 250 fj1053 LFRCNSLSTLEKNDVVQHYWDVLVQAFVQNGTVSTNEFLCDKDKTSTVAPTIHTTVPSPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|435 LFRCNSLSTLEKNDVVQHYWDVLVQAFVQNGTVSTNEFLCDKDKTSTVAPTIHTTVPSPT 160 170 180 190 200 210 260 270 280 290 300 310 fj1053 TTPTPKEKPEAGTYSVNNGNDTCLLATMGLQLNITQDKVASVININPNTTHSTGSCRSHT :::::::::::::::::::::::::::::::::::::::::::::::::::::.. :: gi|435 TTPTPKEKPEAGTYSVNNGNDTCLLATMGLQLNITQDKVASVININPNTTHSTAAAVSH- 220 230 240 250 260 320 330 340 350 360 370 fj1053 ALLRLNSSTIKYLDFVFAVKNENRFYLKEVNISMYLVNGSVFSIANNNLSYWDAPLGSSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|435 ALLRLNSSTIKYLDFVFAVKNENRFYLKEVNISMYLVNGSVFSIANNNLSYWDAPLGSSY 270 280 290 300 310 320 380 390 400 410 420 430 fj1053 MCNKEQTVSVSGAFQINTFDLRVQPFNVTQGKYSTAEECSADSDLNFLIPVAVGVALGFL ::::::::::::::::::::::::::::::::::::.::: :.: ..:::. ::..:. : gi|435 MCNKEQTVSVSGAFQINTFDLRVQPFNVTQGKYSTAQECSLDDD-TILIPIIVGAGLSGL 330 340 350 360 370 380 440 450 fj1053 IIVVFISYMIGRRKSRTGYQSV :::. :.:.:::::: .:::.. gi|435 IIVIVIAYVIGRRKSYAGYQTL 390 400 410 >>gi|74008245|ref|XP_851885.1| PREDICTED: similar to lys (412 aa) initn: 1280 init1: 1280 opt: 2296 Z-score: 2754.4 bits: 518.8 E(): 8.8e-145 Smith-Waterman score: 2296; 84.466% identity (95.631% similar) in 412 aa overlap (48-458:1-412) 20 30 40 50 60 70 fj1053 LTQVQRAFSLVLQLLLYRRRRRRRRLLCGVMVCFRLFPVPGSGLVLVCLVLGAVRSYALE :::::: :.:::::::.::::::: ::::: gi|740 MVCFRLSPAPGSGLVLLCLVLGAVSSYALE 10 20 30 80 90 100 110 120 130 fj1053 LNLTDSENATCLYAKWQMNFTVRYETTNKTYKTVTISDHGTVTYNGSICGDDQNGPKIAV .:.::::.:::::::::::::..:.::.:..::.:::: .:.:::::.::.:::.:::.: gi|740 VNVTDSEKATCLYAKWQMNFTIQYNTTSKNFKTATISDFSTATYNGSVCGNDQNNPKIVV 40 50 60 70 80 90 140 150 160 170 180 190 fj1053 QFGPGFSWIANFTKAASTYSIDSVSFSYNTGDNTTFPDAEDKGILTVDELLAIRIPLNDL ::: :::::.:::: :.: :::.::::: .::.:::::..:::::: .:...:::::.. gi|740 QFGSGFSWIVNFTKKESAYLIDSISFSYNLSDNATFPDAKEKGILTVHDLVGFRIPLNNI 100 110 120 130 140 150 200 210 220 230 240 250 fj1053 FRCNSLSTLEKNDVVQHYWDVLVQAFVQNGTVSTNEFLCDKDKTST-VAPTIHTTVPSPT :::::::::::: :::.:::: ::::::::::::.::::.:::::: :.::: ::.:::: gi|740 FRCNSLSTLEKNGVVQYYWDVHVQAFVQNGTVSTKEFLCEKDKTSTTVVPTISTTTPSPT 160 170 180 190 200 210 260 270 280 290 300 310 fj1053 TTPTPKEKPEAGTYSVNNGNDTCLLATMGLQLNITQDKVASVININPNTTHSTGSCRSHT ::::::::::.:.:::::.: ::::::::::::::..::::::::::::: ::::. .: gi|740 TTPTPKEKPEVGSYSVNNSNGTCLLATMGLQLNITHNKVASVININPNTTDFTGSCQPQT 220 230 240 250 260 270 320 330 340 350 360 370 fj1053 ALLRLNSSTIKYLDFVFAVKNENRFYLKEVNISMYLVNGSVFSIANNNLSYWDAPLGSSY ::::::::.::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|740 ALLRLNSSNIKYLDFVFAVKNENRFYLKEVNVSMYLVNGSVFSIANNNLSYWDAPLGSSY 280 290 300 310 320 330 380 390 400 410 420 430 fj1053 MCNKEQTVSVSGAFQINTFDLRVQPFNVTQGKYSTAEECSADSDLNFLIPVAVGVALGFL :::::::::::::::::::::::::::: .:::::::::::::::::::::::::::::: gi|740 MCNKEQTVSVSGAFQINTFDLRVQPFNVMEGKYSTAEECSADSDLNFLIPVAVGVALGFL 340 350 360 370 380 390 440 450 fj1053 IIVVFISYMIGRRKSRTGYQSV :::::::::::::::::::::: gi|740 IIVVFISYMIGRRKSRTGYQSV 400 410 >>gi|109132122|ref|XP_001084005.1| PREDICTED: lysosomal- (480 aa) initn: 2267 init1: 2160 opt: 2283 Z-score: 2738.0 bits: 515.9 E(): 7.3e-144 Smith-Waterman score: 2673; 89.035% identity (95.614% similar) in 456 aa overlap (1-456:37-478) 10 20 30 fj1053 SADSWLLQGCGRWSSVLLTQVQRAFSLVLQ :::::::::::::: ::::::::::::::: gi|109 RIPTKPYVSGSLLGTLLAFVHECFAHNNTISADSWLLQGCGRWSPVLLTQVQRAFSLVLQ 10 20 30 40 50 60 40 50 60 70 80 90 fj1053 LLLYRRRRRRRRLLCGVMVCFRLFPVPGSGLVLVCLVLGAVRSYALELNLTDSENATCLY ::::.::: ::::::::::::::::::::::::::::: :: .::::: gi|109 LLLYHRRRCRRRLLCGVMVCFRLFPVPGSGLVLVCLVL-------------DSGKATCLY 70 80 90 100 110 100 110 120 130 140 150 fj1053 AKWQMNFTVRYETTNKTYKTVTISDHGTVTYNGSICGDDQNGPKIAVQFGPGFSWIANFT :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::. gi|109 AKWQMNFTVRYETTNKTYKTVTISDRGTVTYNGSICGDDQNGPKIAVQFGPGFSWIANFS 120 130 140 150 160 170 160 170 180 190 200 210 fj1053 KAASTYSIDSVSFSYNTGDNTTFPDAEDKGILTVDELLAIRIPLNDLFRCNSLSTLEKND ::::::::::.::::::::::::::::::::.::::::::.::::::::::::::::::: gi|109 KAASTYSIDSISFSYNTGDNTTFPDAEDKGIITVDELLAIKIPLNDLFRCNSLSTLEKND 180 190 200 210 220 230 220 230 240 250 260 270 fj1053 VVQHYWDVLVQAFVQNGTVSTNEFLCDKDKTSTVAPTIHTTVPSPTTTPTPKEKPEAGTY :::.:::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|109 VVQNYWDVLVQAFVQNGTVSTNEFLCDEDKTSTVAPTIHTTVPSPTTTPTPKEKPEAGTY 240 250 260 270 280 290 280 290 300 310 320 330 fj1053 SVNNGNDTCLLATMGLQLNITQDKVASVININPNTTHSTGSCRSHTALLRLNSSTIKYLD ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SVNNGNETCLLATMGLQLNITQDKVASVININPNTTHSTGSCRSHTALLRLNSSTIKYLD 300 310 320 330 340 350 340 350 360 370 380 390 fj1053 FVFAVKNENRFYLKEVNISMYLVNGSVFSIANNNLSYWDAPLGSSYMCNKEQTVSVSGAF :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|109 FVFAVKNENRFYLKEVNVSMYLVNGSVFSIANNNLSYWDAPLGSSYMCNKEQTVSVSGAF 360 370 380 390 400 410 400 410 420 430 440 450 fj1053 QINTFDLRVQPFNVTQGKYSTAEECSADSDLNFLIPVAVGVALGFLIIVVFISYMIGRRK ::::::::::::::::::::::..::::.: :::.:.:::.::. ..:.:...:.:: .. gi|109 QINTFDLRVQPFNVTQGKYSTAQDCSADDD-NFLVPIAVGAALAGVLILVLLAYFIGLKR 420 430 440 450 460 470 fj1053 SRTGYQSV ..::. gi|109 HHAGYEQF 480 458 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sun Aug 10 11:33:28 2008 done: Sun Aug 10 11:35:54 2008 Total Scan time: 851.070 Total Display time: 0.120 Function used was FASTA [version 34.26.5 April 26, 2007]