hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-12484894/chunk_1/iprscan-20080810-12484894.nocrc
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Query sequence: fj13051
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00651.21.fs BTB/POZ domain                                  81.9    2.3e-22   2
PF00651.21.ls BTB/POZ domain                                  73.4    6.6e-19   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00651.21.fs   1/2      23   130 ..     1   135 []    71.6  1.7e-19
PF00651.21.ls   1/1      23   130 ..     1   135 []    73.4  6.6e-19
PF00651.21.fs   2/2     133   162 ..   105   135 .]    10.3    0.022

Alignments of top-scoring domains:
PF00651.21.fs: domain 1 of 2, from 23 to 130: score 71.6, E = 1.7e-19
                   *->lnelrkqgelcDVtLvvgdgsgrydvgkkfkAHKavLaacSpYFkal
                      l++ +++ e  D  + ++        gk +++HKavL  + + F+++
     fj13051    23    LKKEFDSPETADLKFRID--------GKYIHVHKAVLKIRCEHFRSM 61   

                   FtgqfkesiteeessvsseieledvspedfealLefiYtgelsitqdqks
                   F + +      e+++ +  ie++ +s+ + +a+L+++Yt++++++     
     fj13051    62 FQSYW-----NEDMKEV--IEIDQFSYPVYRAFLQYLYTDTVDLP----- 99   

                   PssckseenvedlLaaAadllqipslvdaCeefliksl<-*
                         +e++  lL +A   +   +l+++C + +++ +   
     fj13051   100 ------PEDAIGLLDLA-TSYCENRLKKLCQHIIKRGI    130  

PF00651.21.ls: domain 1 of 1, from 23 to 130: score 73.4, E = 6.6e-19
                   *->lnelrkqgelcDVtLvvgdgsgrydvgkkfkAHKavLaacSpYFkal
                      l++ +++ e  D  + ++        gk +++HKavL  + + F+++
     fj13051    23    LKKEFDSPETADLKFRID--------GKYIHVHKAVLKIRCEHFRSM 61   

                   FtgqfkesiteeessvsseieledvspedfealLefiYtgelsitqdqks
                   F + +      e+++ +  ie++ +s+ + +a+L+++Yt++++++     
     fj13051    62 FQSYW-----NEDMKEV--IEIDQFSYPVYRAFLQYLYTDTVDLP----- 99   

                   PssckseenvedlLaaAadllqipslvdaCeefliksl<-*
                         +e++  lL +A   +   +l+++C + +++ +   
     fj13051   100 ------PEDAIGLLDLA-TSYCENRLKKLCQHIIKRGI    130  

PF00651.21.fs: domain 2 of 2, from 133 to 162: score 10.3, E = 0.022
                   *->envedlLaaAadllqipslvdaCeefliksl<-*
                      en+ +l++aA  +++ ++l + C +f+i++l   
     fj13051   133    ENAFSLFSAA-VRYDAEDLEEFCFKFCINHL    162  

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