hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-12484894/chunk_1/iprscan-20080810-12484894.nocrc
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Query sequence: fj13051
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00225                                                  88.2      1e-21   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00225    1/1      33   130 ..     1   114 []    88.2    1e-21

Alignments of top-scoring domains:
SM00225: domain 1 of 1, from 33 to 130: score 88.2, E = 1e-21
                   *->cDvtlvvggdlggdnaegkkfhasqHkavLaacrrdSpyFkalfes.
                       D+++ ++g         k +h+  HkavL  +   +++F+++f s 
     fj13051    33    ADLKFRIDG---------KYIHV--HKAVLKIR---CEHFRSMFQSy 65   

                   ........ieldDeallievspeaFralLnflYt.kldlpeedvenveel
                    +++ ++ ie+d       +s+++ ra+L++lYt+++dlp+e   ++ +l
     fj13051    66 wnedmkevIEIDQ------FSYPVYRAFLQYLYTdTVDLPPE---DAIGL 106  

                   LelAdfldSYGqip.lvelCeefllknl<-*
                   L+lA  +    +  +l++lC+ ++++ +   
     fj13051   107 LDLATSY----CENrLKKLCQHIIKRGI    130  

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