hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-13072023/chunk_1/iprscan-20080810-13072023.nocrc
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Query sequence: fj13059
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00630                                                 616.3     1e-180   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00630    1/1      78   509 ..     1   532 []   616.3   1e-180

Alignments of top-scoring domains:
SM00630: domain 1 of 1, from 78 to 509: score 616.3, E = 1e-180
                   *->fnhllldedsgierlyVGArNriysLslpnlsllsevvtgpvldwps
                      +n++ + + ++  +l++G r+ +y++ l+  +   e++++++l+w+s
     fj13059    78    LNIQRVLRVNR--TLFIGDRDNLYRVELEPPT-STELRYQRKLTWRS 121  

                   ceepnekclkceeCaakgkeeCssneteCdNyirvLlvdndhiadthLyv
                   ++       +++ C++kgk    + e+eC+N+++vLl++++    + L+v
     fj13059   122 NPS------DINVCRMKGK----Q-EGECRNFVKVLLLRDE----STLFV 156  

                   CGTnafgPdVtCrlinlgdlepadeseaedqiltlclyskevnlsesgrg
                   CG+naf+P  +C+ + +++l+p                   v++ +sg++
     fj13059   157 CGSNAFNP--VCANYSIDTLQP-------------------VGDNISGMA 185  

                   kCPydPlgsstsvvvdggvPgggeLYsgtsadfsgvalsysssdpiifRs
                   +CPydP+++++++++dg      +L+++t++df++       +d++i+Rs
     fj13059   186 RCPYDPKHANVALFSDG------MLFTATVTDFLA-------IDAVIYRS 222  

                   lgttqdgfefefhslrttiydskwgydlnepnFVyaFeipesgdgdfVYF
                   lg        +++ lrt ++dskw    +ep+FV+a+e+     g++VYF
     fj13059   223 LG--------DRPTLRTVKHDSKW---FKEPYFVHAVEW-----GSHVYF 256  

                   FFrEtaveainrdcssekavvsRVARvCknDvGG.qrlLqkkWtSFLKar
                   FFrE+a+e+++      k+vvsRVARvCknDvGG++r+L+k WtSFLKar
     fj13059   257 FFREIAMEFNY--LE--KVVVSRVARVCKNDVGGsPRVLEKQWTSFLKAR 302  

                   LnCsvpgkggvrefyFneLQavfllppGaLArelgiesddvlYgVFsqgq
                   LnCsvp  g+++ fyFn+LQav+  ++     +++    +v+ +VFs   
     fj13059   303 LNCSVP--GDSH-FYFNVLQAVTGVVS----LGGR----PVVLAVFS--- 338  

                   qtssrdaanpipgSAVCaFslkdInavFneGpfkcyegpnsawlpvegnk
                    t+s    n+ipgSAVCaF+l  + avF+ G+f+++++p+s w+pv++++
     fj13059   339 -TPS----NSIPGSAVCAFDLTQVAAVFE-GRFREQKSPESIWTPVPEDQ 382  

                   vPyprPGtCisntfregrndssskdlPddvlnfikdhpLmdeavpPltgr
                   vP prPG+C+  ++     +  s+ lPdd+lnf+k+hpLmdeavp+l++ 
     fj13059   383 VPRPRPGCCAAPGMQ----YNASSALPDDILNFVKTHPLMDEAVPSLGHA 428  

                   PllvktgtdyrlTsiaVdrvrgldGgkneytVlFlGTsdGrvlKvvvsrs
                   P+  +t+ +++lT++aVd+ +g++G+    tV+FlG++ G+vlK++v ++
     fj13059   429 PWILRTLMRHQLTRVAVDVGAGPWGN---QTVVFLGSEAGTVLKFLVRPN 475  

                   ssssssaglesvlleelqvfppgsepirdmvlsskk<-*
                    s +s+++  sv lee+++++p  ++ r     + +   
     fj13059   476 AS-TSGTSGLSVFLEEFETYRPD-RCGRPGGGETGQ    509  

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