hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-13580721/chunk_1/iprscan-20080810-13580721.nocrc
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Query sequence: fj13355
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF07651.6.ls ANTH domain                                    377.0   2.7e-110   1
PF07651.6.fs ANTH domain                                    375.2   9.3e-110   1
PF01417.11.fs ENTH domain                                     78.1    2.6e-21   1
PF01417.11.ls ENTH domain                                     80.0    7.1e-21   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF07651.6.fs   1/1      95   361 ..     1   301 []   375.2 9.3e-110
PF01417.11.fs   1/1      95   207 ..     1   130 [.    78.1  2.6e-21
PF07651.6.ls   1/1      95   361 ..     1   301 []   377.0 2.7e-110
PF01417.11.ls   1/1      95   217 ..     1   140 []    80.0  7.1e-21

Alignments of top-scoring domains:
PF07651.6.fs: domain 1 of 1, from 95 to 361: score 375.2, E = 9.3e-110
                   *->dsdLevAVvKATshedevPpKekhvreIlvtTssnspakvaacfwal
                      +s+  + V+KAT+he + P+K+++++ I++t++ n  +++++++ +l
     fj13355    95    GSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMN--VNIPQLADSL 139  

                   srRlpltrnwvValKaLiliHklLreGhpsvlqellrarrrissllriss
                   ++R  ++ +wvV++K+Li++H+l+ +G+++++q+l+++++ +++ +++++
     fj13355   140 FERTTNS-SWVVVFKSLITTHHLMVYGNERFIQYLASRNTLFNLSNFLDK 188  

                   RftfrddsssltwdygafiRaYakYLdeRlefhrklpvdpGtferveygt
                      ++ ++    +d+++fiR+Y++YL+e++  +r+ ++d   f +v++g 
     fj13355   189 ---SGLQG----YDMSTFIRRYSRYLNEKAVSYRQVAFD---FTKVKRG- 227  

                   stakkslvavddpnerNNYyeltmsmedlLdkipkLQklldrllkckptg
                              d+++r      tm++e+lL+++p++Q+++d+ll++ +++
     fj13355   228 ----------ADGVMR------TMNTEKLLKTVPIIQNQMDALLDFNVNS 261  

                   nalsneciiaAlillikEsfglYkainegiinLlekffedklskhdAdaa
                   n+l+n++i+aA++ll+k+ ++l++a+negiinLlek+f+  ++k+++++ 
     fj13355   262 NELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFD--MKKNQCKEG 309  

                   ldiykrfskQferLkeFyevCkslgylrsletIPkLphiPpnllealeey
                   ldiyk+f+++++r++eF++v++++g++r++  IP+L ++P++ll+ale++
     fj13355   310 LDIYKKFLTRMTRISEFLKVAEQVGIDRGD--IPDLSQAPSSLLDALEQH 357  

                   lrdp<-*
                   l+     
     fj13355   358 LASL    361  

PF01417.11.fs: domain 1 of 1, from 95 to 207: score 78.1, E = 2.6e-21
                   *->yseaeikVreATnnDpwGPsgklmaeIaeaTyneklyvefeeimsvL
                       s   ++V++AT+ + +GP++k++++++++T++   +v ++  ++ L
     fj13355    95    GSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNE--MNVNIPQLADSL 139  

                   wkRLnkddknegknWRhVYKaLtlLeYLlknGSErvvddcreniyHkfnI
                   ++R++      +++W +V+K+L++ ++L+ +G+Er+++++ + ++  fn+
     fj13355   140 FERTT------NSSWVVVFKSLITTHHLMVYGNERFIQYLASRNT-LFNL 182  

                   rtLedFqyVfiDenGkmlrfDqGinVRkKAkel<-*
                   + + d+ +     +G    +D+++ +R+++++l   
     fj13355   183 SNFLDKSG----LQG----YDMSTFIRRYSRYL    207  

PF07651.6.ls: domain 1 of 1, from 95 to 361: score 377.0, E = 2.7e-110
                   *->dsdLevAVvKATshedevPpKekhvreIlvtTssnspakvaacfwal
                      +s+  + V+KAT+he + P+K+++++ I++t++ n  +++++++ +l
     fj13355    95    GSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMN--VNIPQLADSL 139  

                   srRlpltrnwvValKaLiliHklLreGhpsvlqellrarrrissllriss
                   ++R  ++ +wvV++K+Li++H+l+ +G+++++q+l+++++ +++ +++++
     fj13355   140 FERTTNS-SWVVVFKSLITTHHLMVYGNERFIQYLASRNTLFNLSNFLDK 188  

                   RftfrddsssltwdygafiRaYakYLdeRlefhrklpvdpGtferveygt
                      ++ ++    +d+++fiR+Y++YL+e++  +r+ ++d   f +v++g 
     fj13355   189 ---SGLQG----YDMSTFIRRYSRYLNEKAVSYRQVAFD---FTKVKRG- 227  

                   stakkslvavddpnerNNYyeltmsmedlLdkipkLQklldrllkckptg
                              d+++r      tm++e+lL+++p++Q+++d+ll++ +++
     fj13355   228 ----------ADGVMR------TMNTEKLLKTVPIIQNQMDALLDFNVNS 261  

                   nalsneciiaAlillikEsfglYkainegiinLlekffedklskhdAdaa
                   n+l+n++i+aA++ll+k+ ++l++a+negiinLlek+f+  ++k+++++ 
     fj13355   262 NELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFD--MKKNQCKEG 309  

                   ldiykrfskQferLkeFyevCkslgylrsletIPkLphiPpnllealeey
                   ldiyk+f+++++r++eF++v++++g++r++  IP+L ++P++ll+ale++
     fj13355   310 LDIYKKFLTRMTRISEFLKVAEQVGIDRGD--IPDLSQAPSSLLDALEQH 357  

                   lrdp<-*
                   l+     
     fj13355   358 LASL    361  

PF01417.11.ls: domain 1 of 1, from 95 to 217: score 80.0, E = 7.1e-21
                   *->yseaeikVreATnnDpwGPsgklmaeIaeaTyneklyvefeeimsvL
                       s   ++V++AT+ + +GP++k++++++++T++   +v ++  ++ L
     fj13355    95    GSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNE--MNVNIPQLADSL 139  

                   wkRLnkddknegknWRhVYKaLtlLeYLlknGSErvvddcreniyHkfnI
                   ++R++      +++W +V+K+L++ ++L+ +G+Er+++++ + ++  fn+
     fj13355   140 FERTT------NSSWVVVFKSLITTHHLMVYGNERFIQYLASRNT-LFNL 182  

                   rtLedFqyVfiDenGkmlrfDqGinVRkKAkelleLLnDderL<-*
                   + + d+ +     +G    +D+++ +R+++++l e+   ++     
     fj13355   183 SNFLDKSG----LQG----YDMSTFIRRYSRYLNEKAVSYRQV    217  

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