hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-10105822/chunk_1/iprscan-20090618-10105822.nocrc
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Query sequence: fj13840
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00178.13.ls Ets-domain                                     205.3    1.3e-58   1
PF00178.13.fs Ets-domain                                     203.4    4.9e-58   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00178.13.fs   1/1      16    99 ..     1    89 []   203.4  4.9e-58
PF00178.13.ls   1/1      16    99 ..     1    89 []   205.3  1.3e-58

Alignments of top-scoring domains:
PF00178.13.fs: domain 1 of 1, from 16 to 99: score 203.4, E = 4.9e-58
                   *->qiqLWQFLleLLtdrqdnsdfIrWtgrdkGeFKlvSKDpeeVARLWG
                      +i+LWQFLl+LL d q+++++I+Wt+ ++GeFKl   ++eeVA+LWG
     fj13840    16    AITLWQFLLQLLLD-QKHEHLICWTS-NDGEFKLL--KAEEVAKLWG 58   

                   erKNNkpnMNYdKLSRALRYYYkknIirKvkGkRlvYkFvse<-*
                    rKN k+nMNYdKLSRALRYYY+knIi+Kv G+++vYkFvs    
     fj13840    59 LRKN-KTNMNYDKLSRALRYYYDKNIIKKVIGQKFVYKFVSF    99   

PF00178.13.ls: domain 1 of 1, from 16 to 99: score 205.3, E = 1.3e-58
                   *->qiqLWQFLleLLtdrqdnsdfIrWtgrdkGeFKlvSKDpeeVARLWG
                      +i+LWQFLl+LL d q+++++I+Wt+ ++GeFKl   ++eeVA+LWG
     fj13840    16    AITLWQFLLQLLLD-QKHEHLICWTS-NDGEFKLL--KAEEVAKLWG 58   

                   erKNNkpnMNYdKLSRALRYYYkknIirKvkGkRlvYkFvse<-*
                    rKN k+nMNYdKLSRALRYYY+knIi+Kv G+++vYkFvs    
     fj13840    59 LRKN-KTNMNYDKLSRALRYYYDKNIIKKVIGQKFVYKFVSF    99   

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