# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofj14036.fasta.nr -Q fj14036.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fj14036, 145 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6841624 sequences Expectation_n fit: rho(ln(x))= 4.9773+/-0.000179; mu= 7.2647+/- 0.010 mean_var=63.7490+/-12.469, 0's: 44 Z-trim: 56 B-trim: 0 in 0/67 Lambda= 0.160634 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62088044|dbj|BAD92469.1| palmitoylated membrane ( 145) 991 237.4 4.8e-61 gi|150421601|sp|Q13368|MPP3_HUMAN MAGUK p55 subfam ( 585) 896 215.8 6.3e-54 gi|1022813|gb|AAB36964.1| human homolog of Drosoph ( 585) 896 215.8 6.3e-54 gi|119572046|gb|EAW51661.1| membrane protein, palm ( 610) 896 215.8 6.5e-54 gi|114666924|ref|XP_523661.2| PREDICTED: palmitoyl ( 692) 890 214.5 1.9e-53 gi|109116092|ref|XP_001098555.1| PREDICTED: simila ( 725) 886 213.6 3.7e-53 gi|149723719|ref|XP_001491321.1| PREDICTED: simila ( 585) 819 198.0 1.5e-48 gi|73965596|ref|XP_548070.2| PREDICTED: similar to ( 584) 795 192.4 7e-47 gi|109489071|ref|XP_001061133.1| PREDICTED: simila ( 564) 755 183.1 4.2e-44 gi|149054348|gb|EDM06165.1| membrane protein, palm ( 585) 755 183.1 4.3e-44 gi|148702132|gb|EDL34079.1| membrane protein, palm ( 585) 751 182.2 8.2e-44 gi|37930305|gb|AAO65586.1| membrane associated gua ( 585) 751 182.2 8.2e-44 gi|126307864|ref|XP_001362112.1| PREDICTED: simila ( 582) 740 179.7 4.8e-43 gi|118102894|ref|XP_418108.2| PREDICTED: similar t ( 587) 634 155.1 1.2e-35 gi|27734421|sp|O88910|MPP3_MOUSE MAGUK p55 subfami ( 568) 631 154.4 1.9e-35 gi|73965598|ref|XP_857158.1| PREDICTED: similar to ( 586) 531 131.2 1.8e-28 gi|125812993|ref|XP_700838.2| PREDICTED: similar t ( 608) 529 130.8 2.6e-28 gi|189525845|ref|XP_001340190.2| PREDICTED: simila ( 587) 515 127.5 2.4e-27 gi|124486853|ref|NP_001074756.1| membrane protein, ( 565) 485 120.6 2.9e-25 gi|182667930|sp|Q8BVD5.2|MPP7_MOUSE MAGUK p55 subf ( 576) 485 120.6 2.9e-25 gi|148691077|gb|EDL23024.1| mCG5292, isoform CRA_d ( 576) 485 120.6 2.9e-25 gi|194227077|ref|XP_001495668.2| PREDICTED: membra ( 576) 481 119.6 5.5e-25 gi|172045949|sp|Q5U2Y3.2|MPP7_RAT MAGUK p55 subfam ( 576) 480 119.4 6.5e-25 gi|119606452|gb|EAW86046.1| membrane protein, palm ( 337) 474 117.9 1.1e-24 gi|118085629|ref|XP_418583.2| PREDICTED: similar t ( 576) 476 118.5 1.2e-24 gi|109088523|ref|XP_001105855.1| PREDICTED: simila ( 598) 476 118.5 1.3e-24 gi|114629843|ref|XP_001160943.1| PREDICTED: palmit ( 536) 474 118.0 1.6e-24 gi|114629837|ref|XP_001160987.1| PREDICTED: palmit ( 576) 474 118.0 1.7e-24 gi|23271241|gb|AAH38105.1| MPP7 protein [Homo sapi ( 576) 474 118.0 1.7e-24 gi|193787084|dbj|BAG51907.1| unnamed protein produ ( 576) 474 118.0 1.7e-24 gi|74762233|sp|Q5T2T1.1|MPP7_HUMAN MAGUK p55 subfa ( 576) 474 118.0 1.7e-24 gi|109088525|ref|XP_001105654.1| PREDICTED: simila ( 576) 474 118.0 1.7e-24 gi|189039873|sp|A6QQZ7.1|MPP7_BOVIN MAGUK p55 subf ( 576) 471 117.3 2.8e-24 gi|126341435|ref|XP_001375868.1| PREDICTED: simila ( 591) 469 116.9 3.9e-24 gi|73948926|ref|XP_544208.2| PREDICTED: similar to ( 632) 466 116.2 6.6e-24 gi|149634734|ref|XP_001507208.1| PREDICTED: simila ( 597) 465 115.9 7.4e-24 gi|172048102|sp|A8KBF6.1|MPP7_XENTR MAGUK p55 subf ( 576) 446 111.5 1.5e-22 gi|82202306|sp|Q6P0D7.1|MPP7_DANRE MAGUK p55 subfa ( 576) 440 110.1 4e-22 gi|5081459|gb|AAD39392.1|AF124435_1 p55-related MA ( 576) 440 110.1 4e-22 gi|47225125|emb|CAF98752.1| unnamed protein produc ( 532) 439 109.9 4.4e-22 gi|16041106|dbj|BAB69720.1| hypothetical protein [ ( 317) 374 94.7 1e-17 gi|55249731|gb|AAH85813.1| Mpp7 protein [Rattus no ( 591) 376 95.3 1.2e-17 gi|55958705|emb|CAI13640.1| novel protein [Homo sa ( 312) 371 94.0 1.6e-17 gi|49258164|gb|AAH74066.1| Membrane protein, palmi ( 547) 370 93.9 2.9e-17 gi|167873519|gb|EDS36902.1| membrane-associated gu ( 841) 366 93.1 7.9e-17 gi|156229839|gb|AAI52525.1| Mpp2a protein [Danio r ( 340) 361 91.7 8.5e-17 gi|74005604|ref|XP_545598.2| PREDICTED: similar to ( 769) 364 92.6 1e-16 gi|40215542|gb|AAR82754.1| RE70031p [Drosophila me ( 731) 363 92.4 1.1e-16 gi|134025831|gb|AAI36160.1| Mpp2 protein [Xenopus ( 545) 361 91.8 1.2e-16 gi|110761244|ref|XP_393395.3| PREDICTED: similar t (1033) 364 92.7 1.3e-16 >>gi|62088044|dbj|BAD92469.1| palmitoylated membrane pro (145 aa) initn: 991 init1: 991 opt: 991 Z-score: 1251.1 bits: 237.4 E(): 4.8e-61 Smith-Waterman score: 991; 100.000% identity (100.000% similar) in 145 aa overlap (1-145:1-145) 10 20 30 40 50 60 fj1403 RPFPLWWCFRFLEHGEYKENLYGTSLEAIQAVMAKNKVCLVDVEPEALKQLRTSEFKPYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RPFPLWWCFRFLEHGEYKENLYGTSLEAIQAVMAKNKVCLVDVEPEALKQLRTSEFKPYI 10 20 30 40 50 60 70 80 90 100 110 120 fj1403 IFVKPAIQEKRKTPPMSPACEDTAAPFDEQQQEMAASAAFIDRHYGHLVDAVLVKEDLQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 IFVKPAIQEKRKTPPMSPACEDTAAPFDEQQQEMAASAAFIDRHYGHLVDAVLVKEDLQG 70 80 90 100 110 120 130 140 fj1403 AYSQLKVVLEKLSKDTHWVPVSWVR ::::::::::::::::::::::::: gi|620 AYSQLKVVLEKLSKDTHWVPVSWVR 130 140 >>gi|150421601|sp|Q13368|MPP3_HUMAN MAGUK p55 subfamily (585 aa) initn: 921 init1: 896 opt: 896 Z-score: 1123.4 bits: 215.8 E(): 6.3e-54 Smith-Waterman score: 896; 99.265% identity (100.000% similar) in 136 aa overlap (10-145:450-585) 10 20 30 fj1403 RPFPLWWCFRFLEHGEYKENLYGTSLEAIQAVMAKNKVC .::::::::::::::::::::::::::::: gi|150 TTRPRKSHEKEGVEYHFVSKQAFEADLHHNKFLEHGEYKENLYGTSLEAIQAVMAKNKVC 420 430 440 450 460 470 40 50 60 70 80 90 fj1403 LVDVEPEALKQLRTSEFKPYIIFVKPAIQEKRKTPPMSPACEDTAAPFDEQQQEMAASAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|150 LVDVEPEALKQLRTSEFKPYIIFVKPAIQEKRKTPPMSPACEDTAAPFDEQQQEMAASAA 480 490 500 510 520 530 100 110 120 130 140 fj1403 FIDRHYGHLVDAVLVKEDLQGAYSQLKVVLEKLSKDTHWVPVSWVR :::::::::::::::::::::::::::::::::::::::::::::: gi|150 FIDRHYGHLVDAVLVKEDLQGAYSQLKVVLEKLSKDTHWVPVSWVR 540 550 560 570 580 >>gi|1022813|gb|AAB36964.1| human homolog of Drosophila (585 aa) initn: 921 init1: 896 opt: 896 Z-score: 1123.4 bits: 215.8 E(): 6.3e-54 Smith-Waterman score: 896; 99.265% identity (100.000% similar) in 136 aa overlap (10-145:450-585) 10 20 30 fj1403 RPFPLWWCFRFLEHGEYKENLYGTSLEAIQAVMAKNKVC .::::::::::::::::::::::::::::: gi|102 TTRPRKSHEKEGVEYHFVSKQAFEADLHHNKFLEHGEYKENLYGTSLEAIQAVMAKNKVC 420 430 440 450 460 470 40 50 60 70 80 90 fj1403 LVDVEPEALKQLRTSEFKPYIIFVKPAIQEKRKTPPMSPACEDTAAPFDEQQQEMAASAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|102 LVDVEPEALKQLRTSEFKPYIIFVKPAIQEKRKTPPMSPACEDTAAPFDEQQQEMAASAA 480 490 500 510 520 530 100 110 120 130 140 fj1403 FIDRHYGHLVDAVLVKEDLQGAYSQLKVVLEKLSKDTHWVPVSWVR :::::::::::::::::::::::::::::::::::::::::::::: gi|102 FIDRHYGHLVDAVLVKEDLQGAYSQLKVVLEKLSKDTHWVPVSWVR 540 550 560 570 580 >>gi|119572046|gb|EAW51661.1| membrane protein, palmitoy (610 aa) initn: 921 init1: 896 opt: 896 Z-score: 1123.1 bits: 215.8 E(): 6.5e-54 Smith-Waterman score: 896; 99.265% identity (100.000% similar) in 136 aa overlap (10-145:475-610) 10 20 30 fj1403 RPFPLWWCFRFLEHGEYKENLYGTSLEAIQAVMAKNKVC .::::::::::::::::::::::::::::: gi|119 TTRPRKSHEKEGVEYHFVSKQAFEADLHHNKFLEHGEYKENLYGTSLEAIQAVMAKNKVC 450 460 470 480 490 500 40 50 60 70 80 90 fj1403 LVDVEPEALKQLRTSEFKPYIIFVKPAIQEKRKTPPMSPACEDTAAPFDEQQQEMAASAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LVDVEPEALKQLRTSEFKPYIIFVKPAIQEKRKTPPMSPACEDTAAPFDEQQQEMAASAA 510 520 530 540 550 560 100 110 120 130 140 fj1403 FIDRHYGHLVDAVLVKEDLQGAYSQLKVVLEKLSKDTHWVPVSWVR :::::::::::::::::::::::::::::::::::::::::::::: gi|119 FIDRHYGHLVDAVLVKEDLQGAYSQLKVVLEKLSKDTHWVPVSWVR 570 580 590 600 610 >>gi|114666924|ref|XP_523661.2| PREDICTED: palmitoylated (692 aa) initn: 915 init1: 890 opt: 890 Z-score: 1114.8 bits: 214.5 E(): 1.9e-53 Smith-Waterman score: 890; 98.529% identity (100.000% similar) in 136 aa overlap (10-145:557-692) 10 20 30 fj1403 RPFPLWWCFRFLEHGEYKENLYGTSLEAIQAVMAKNKVC .::::::::::::::::::::::::::::: gi|114 TTRPRKSHEKEGVEYHFVSKQAFEADLHHNKFLEHGEYKENLYGTSLEAIQAVMAKNKVC 530 540 550 560 570 580 40 50 60 70 80 90 fj1403 LVDVEPEALKQLRTSEFKPYIIFVKPAIQEKRKTPPMSPACEDTAAPFDEQQQEMAASAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LVDVEPEALKQLRTSEFKPYIIFVKPAIQEKRKTPPMSPACEDTAAPFDEQQQEMAASAA 590 600 610 620 630 640 100 110 120 130 140 fj1403 FIDRHYGHLVDAVLVKEDLQGAYSQLKVVLEKLSKDTHWVPVSWVR :::.:::::::::::::::::::::::::::::::::::::::::: gi|114 FIDQHYGHLVDAVLVKEDLQGAYSQLKVVLEKLSKDTHWVPVSWVR 650 660 670 680 690 >>gi|109116092|ref|XP_001098555.1| PREDICTED: similar to (725 aa) initn: 911 init1: 886 opt: 886 Z-score: 1109.5 bits: 213.6 E(): 3.7e-53 Smith-Waterman score: 886; 97.794% identity (100.000% similar) in 136 aa overlap (10-145:590-725) 10 20 30 fj1403 RPFPLWWCFRFLEHGEYKENLYGTSLEAIQAVMAKNKVC .::::::::::.:::::::::::::::::: gi|109 TTRPRKSHEKEGVEYHFVSKQAFEADLHHNKFLEHGEYKENFYGTSLEAIQAVMAKNKVC 560 570 580 590 600 610 40 50 60 70 80 90 fj1403 LVDVEPEALKQLRTSEFKPYIIFVKPAIQEKRKTPPMSPACEDTAAPFDEQQQEMAASAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LVDVEPEALKQLRTSEFKPYIIFVKPAIQEKRKTPPMSPACEDTAAPFDEQQQEMAASAA 620 630 640 650 660 670 100 110 120 130 140 fj1403 FIDRHYGHLVDAVLVKEDLQGAYSQLKVVLEKLSKDTHWVPVSWVR :::.:::::::::::::::::::::::::::::::::::::::::: gi|109 FIDQHYGHLVDAVLVKEDLQGAYSQLKVVLEKLSKDTHWVPVSWVR 680 690 700 710 720 >>gi|149723719|ref|XP_001491321.1| PREDICTED: similar to (585 aa) initn: 844 init1: 819 opt: 819 Z-score: 1026.9 bits: 198.0 E(): 1.5e-48 Smith-Waterman score: 819; 86.029% identity (100.000% similar) in 136 aa overlap (10-145:450-585) 10 20 30 fj1403 RPFPLWWCFRFLEHGEYKENLYGTSLEAIQAVMAKNKVC :::::::::::::::::.:::::::::::: gi|149 TTRPRKSHEKEGVEYHFVSKQAFEADLHHNRFLEHGEYKENLYGTSLDAIQAVMAKNKVC 420 430 440 450 460 470 40 50 60 70 80 90 fj1403 LVDVEPEALKQLRTSEFKPYIIFVKPAIQEKRKTPPMSPACEDTAAPFDEQQQEMAASAA ::::::.::.::::::::::..:::::::::::::::::.:::::.:.::.::::.:::: gi|149 LVDVEPDALQQLRTSEFKPYVVFVKPAIQEKRKTPPMSPGCEDTASPLDEEQQEMVASAA 480 490 500 510 520 530 100 110 120 130 140 fj1403 FIDRHYGHLVDAVLVKEDLQGAYSQLKVVLEKLSKDTHWVPVSWVR ::..::::::::::::::::.:.:::.:.:::::.:.::::.:::: gi|149 FIEQHYGHLVDAVLVKEDLQSAHSQLRVLLEKLSQDSHWVPISWVR 540 550 560 570 580 >>gi|73965596|ref|XP_548070.2| PREDICTED: similar to pal (584 aa) initn: 468 init1: 443 opt: 795 Z-score: 996.9 bits: 192.4 E(): 7e-47 Smith-Waterman score: 795; 86.029% identity (99.265% similar) in 136 aa overlap (10-145:450-584) 10 20 30 fj1403 RPFPLWWCFRFLEHGEYKENLYGTSLEAIQAVMAKNKVC .::::::::::::::::.:::.:::::::: gi|739 TTRPRKSHEKEGVEYHFVSKQAFEADLHHNKFLEHGEYKENLYGTSLDAIQSVMAKNKVC 420 430 440 450 460 470 40 50 60 70 80 90 fj1403 LVDVEPEALKQLRTSEFKPYIIFVKPAIQEKRKTPPMSPACEDTAAPFDEQQQEMAASAA ::::::.::.::::::::::.:::::::::: :::::::.:::::.:.::.::::::::: gi|739 LVDVEPDALQQLRTSEFKPYVIFVKPAIQEK-KTPPMSPTCEDTATPLDEEQQEMAASAA 480 490 500 510 520 530 100 110 120 130 140 fj1403 FIDRHYGHLVDAVLVKEDLQGAYSQLKVVLEKLSKDTHWVPVSWVR :::..::::::.::::.:::.:.:::.:.::::::::::::::::: gi|739 FIDQYYGHLVDSVLVKQDLQSAHSQLRVLLEKLSKDTHWVPVSWVR 540 550 560 570 580 >>gi|109489071|ref|XP_001061133.1| PREDICTED: similar to (564 aa) initn: 780 init1: 755 opt: 755 Z-score: 947.0 bits: 183.1 E(): 4.2e-44 Smith-Waterman score: 755; 80.147% identity (96.324% similar) in 136 aa overlap (10-145:429-564) 10 20 30 fj1403 RPFPLWWCFRFLEHGEYKENLYGTSLEAIQAVMAKNKVC .::::::.:::::::::::::.:::::::: gi|109 TTRPRKSHEREGVEYHFVSKQAFEADIQHNKFLEHGEHKENLYGTSLEAIQTVMAKNKVC 400 410 420 430 440 450 40 50 60 70 80 90 fj1403 LVDVEPEALKQLRTSEFKPYIIFVKPAIQEKRKTPPMSPACEDTAAPFDEQQQEMAASAA :::::::::..::: :::::.:::::::::::::::.:: :: :.:.:::::::::::: gi|109 LVDVEPEALRHLRTPEFKPYVIFVKPAIQEKRKTPPVSPDSEDPATPLDEQQQEMAASAA 460 470 480 490 500 510 100 110 120 130 140 fj1403 FIDRHYGHLVDAVLVKEDLQGAYSQLKVVLEKLSKDTHWVPVSWVR :::.:::::.:.:::..:::.. :::..:.:.:::::.:::.:::: gi|109 FIDQHYGHLIDTVLVRQDLQSVCSQLRAVIESLSKDTYWVPISWVR 520 530 540 550 560 >>gi|149054348|gb|EDM06165.1| membrane protein, palmitoy (585 aa) initn: 780 init1: 755 opt: 755 Z-score: 946.8 bits: 183.1 E(): 4.3e-44 Smith-Waterman score: 755; 80.147% identity (96.324% similar) in 136 aa overlap (10-145:450-585) 10 20 30 fj1403 RPFPLWWCFRFLEHGEYKENLYGTSLEAIQAVMAKNKVC .::::::.:::::::::::::.:::::::: gi|149 TTRPRKSHEREGVEYHFVSKQAFEADIQHNKFLEHGEHKENLYGTSLEAIQTVMAKNKVC 420 430 440 450 460 470 40 50 60 70 80 90 fj1403 LVDVEPEALKQLRTSEFKPYIIFVKPAIQEKRKTPPMSPACEDTAAPFDEQQQEMAASAA :::::::::..::: :::::.:::::::::::::::.:: :: :.:.:::::::::::: gi|149 LVDVEPEALRHLRTPEFKPYVIFVKPAIQEKRKTPPVSPDSEDPATPLDEQQQEMAASAA 480 490 500 510 520 530 100 110 120 130 140 fj1403 FIDRHYGHLVDAVLVKEDLQGAYSQLKVVLEKLSKDTHWVPVSWVR :::.:::::.:.:::..:::.. :::..:.:.:::::.:::.:::: gi|149 FIDQHYGHLIDTVLVRQDLQSVCSQLRAVIESLSKDTYWVPISWVR 540 550 560 570 580 145 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Sun Aug 10 14:58:55 2008 done: Sun Aug 10 15:01:56 2008 Total Scan time: 560.450 Total Display time: 0.020 Function used was FASTA [version 34.26.5 April 26, 2007]