hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-15015782/chunk_1/iprscan-20080810-15015782.nocrc
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Query sequence: fj14036
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00072                                                  61.5    1.1e-13   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00072    1/1       1   133 [.     1   203 []    61.5  1.1e-13

Alignments of top-scoring domains:
SM00072: domain 1 of 1, from 1 to 133: score 61.5, E = 1.1e-13
                   *->drRpivLsGpsGvGKstlkakLlqeyPdypkfgfsVshTTRppRpgE
                              +p               +P                    
     fj14036     1    --------RP---------------FP-------------------- 4    

                   vnGPvvDYhFvsLkeefeqdiksgkflEwgeysgnlyYGTskesvrqvae
                                   +++++    flE+gey +n +YGTs+e++++v++
     fj14036     5 ----------------LWWCF---RFLEHGEYKEN-LYGTSLEAIQAVMA 34   

                   kGKhclLDidpqgvkqlkkarRkselnpiviFIapPsleeleerlrg.ae
                   k+K+cl+D++p+++kql+++    e+ p++iF++p  +e  ++ ++++a+
     fj14036    35 KNKVCLVDVEPEALKQLRTS----EFKPYIIFVKPAIQEKRKTPPMSpAC 80   

                   qRgteteeriqkrlaaaaqkeaqeyskeahlFdlvivnddledayYkeLk
                   + +   ++++q+++aa+a ++ ++y+   hl+d+v+v +dl+ ay ++Lk
     fj14036    81 EDTAAPFDEQQQEMAASAAFIDRHYG---HLVDAVLVKEDLQGAY-SQLK 126  

                   eileaeq<-*
                    +le++    
     fj14036   127 VVLEKLS    133  

//