# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofj15056.fasta.nr -Q fj15056.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fj15056, 155 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6840640 sequences Expectation_n fit: rho(ln(x))= 5.1579+/-0.000183; mu= 7.0881+/- 0.010 mean_var=75.7557+/-14.373, 0's: 44 Z-trim: 64 B-trim: 0 in 0/66 Lambda= 0.147356 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62088050|dbj|BAD92472.1| transcription factor-l ( 155) 1032 227.7 4.6e-58 gi|55732673|emb|CAH93035.1| hypothetical protein [ ( 244) 673 151.6 6.1e-35 gi|11761692|gb|AAG40145.1|AF213666_1 bHLHZip trans ( 214) 672 151.3 6.4e-35 gi|119581247|gb|EAW60843.1| MAX-like protein X, is ( 214) 672 151.3 6.4e-35 gi|114667200|ref|XP_001163510.1| PREDICTED: simila ( 268) 672 151.4 7.6e-35 gi|109115497|ref|XP_001110254.1| PREDICTED: MAX-li ( 268) 672 151.4 7.6e-35 gi|7020051|dbj|BAA90977.1| unnamed protein product ( 244) 667 150.3 1.5e-34 gi|11761694|gb|AAG40146.1|AF213667_1 bHLHZip trans ( 244) 667 150.3 1.5e-34 gi|109115495|ref|XP_001110383.1| PREDICTED: MAX-li ( 244) 667 150.3 1.5e-34 gi|6503204|gb|AAF14638.1|AF203978_1 MAX-like bHLHZ ( 244) 667 150.3 1.5e-34 gi|119581248|gb|EAW60844.1| MAX-like protein X, is ( 244) 667 150.3 1.5e-34 gi|119581246|gb|EAW60842.1| MAX-like protein X, is ( 298) 667 150.4 1.7e-34 gi|20138856|sp|Q9UH92.2|MLX_HUMAN Max-like protein ( 298) 667 150.4 1.7e-34 gi|109115493|ref|XP_001110337.1| PREDICTED: transc ( 298) 667 150.4 1.7e-34 gi|11761700|gb|AAG40149.1|AF213670_1 bHLHZip trans ( 214) 663 149.4 2.4e-34 gi|55726888|emb|CAH90203.1| hypothetical protein [ ( 244) 662 149.2 3.1e-34 gi|73965701|ref|XP_858649.1| PREDICTED: similar to ( 268) 662 149.3 3.3e-34 gi|123210119|emb|CAM24468.1| MAX-like protein X [M ( 214) 659 148.6 4.3e-34 gi|11761702|gb|AAG40150.1|AF213671_1 bHLHZip trans ( 244) 658 148.4 5.5e-34 gi|1927190|gb|AAB51367.1| transcription factor lik ( 296) 658 148.5 6.4e-34 gi|20138822|sp|O08609|MLX_MOUSE Max-like protein X ( 298) 658 148.5 6.4e-34 gi|149723772|ref|XP_001494190.1| PREDICTED: simila ( 214) 656 147.9 6.7e-34 gi|73965699|ref|XP_849377.1| PREDICTED: similar to ( 298) 657 148.2 7.5e-34 gi|146231778|gb|ABQ12964.1| transcription factor-l ( 243) 654 147.5 1e-33 gi|119917764|ref|XP_001253487.1| PREDICTED: simila ( 244) 654 147.5 1e-33 gi|74216377|dbj|BAE25128.1| unnamed protein produc ( 244) 654 147.5 1e-33 gi|85541335|gb|ABC70884.1| max-like factor protein ( 244) 654 147.5 1e-33 gi|124504308|gb|AAI28703.1| MAX-like protein X [Ra ( 298) 654 147.6 1.2e-33 gi|123210117|emb|CAM24466.1| MAX-like protein X [M ( 298) 654 147.6 1.2e-33 gi|119917762|ref|XP_001253470.1| PREDICTED: simila ( 298) 654 147.6 1.2e-33 gi|149723768|ref|XP_001494134.1| PREDICTED: simila ( 244) 651 146.9 1.6e-33 gi|149723770|ref|XP_001494161.1| PREDICTED: simila ( 298) 651 147.0 1.8e-33 gi|74267642|gb|AAI03323.1| MAX-like protein X [Bos ( 244) 649 146.5 2.1e-33 gi|21594826|gb|AAH31380.1| MAX-like protein X [Mus ( 298) 648 146.3 2.8e-33 gi|126307908|ref|XP_001363455.1| PREDICTED: simila ( 214) 646 145.8 2.9e-33 gi|126307906|ref|XP_001363372.1| PREDICTED: simila ( 244) 641 144.8 6.8e-33 gi|126307904|ref|XP_001363290.1| PREDICTED: simila ( 301) 641 144.8 8e-33 gi|53130730|emb|CAG31694.1| hypothetical protein [ ( 245) 612 138.6 4.9e-31 gi|66267384|gb|AAH95807.1| MAX-like protein X [Dan ( 247) 558 127.1 1.4e-27 gi|194382216|dbj|BAG58863.1| unnamed protein produ ( 162) 471 108.5 3.8e-22 gi|72137306|ref|XP_793306.1| PREDICTED: similar to ( 221) 463 106.9 1.5e-21 gi|156554681|ref|XP_001601355.1| PREDICTED: simila ( 246) 430 99.9 2.2e-19 gi|91077026|ref|XP_967151.1| PREDICTED: similar to ( 217) 427 99.2 3.1e-19 gi|66535613|ref|XP_395909.2| PREDICTED: similar to ( 245) 418 97.4 1.3e-18 gi|108872513|gb|EAT36738.1| bhlhzip transcription ( 233) 406 94.8 7.2e-18 gi|108872512|gb|EAT36737.1| bhlhzip transcription ( 243) 406 94.8 7.4e-18 gi|70571392|dbj|BAE06737.1| transcription factor p ( 238) 401 93.7 1.5e-17 gi|193582552|ref|XP_001947371.1| PREDICTED: simila ( 235) 400 93.5 1.7e-17 gi|156225356|gb|EDO46174.1| predicted protein [Nem ( 212) 390 91.4 7e-17 gi|157018544|gb|EAA06849.4| AGAP000682-PA [Anophel ( 244) 390 91.4 7.8e-17 >>gi|62088050|dbj|BAD92472.1| transcription factor-like (155 aa) initn: 1032 init1: 1032 opt: 1032 Z-score: 1197.7 bits: 227.7 E(): 4.6e-58 Smith-Waterman score: 1032; 100.000% identity (100.000% similar) in 155 aa overlap (1-155:1-155) 10 20 30 40 50 60 fj1505 LDPTGPQDDLSLPPSLSVDDEDSDYHQEAYKESYKDRRRRAHTQAEQKRRDAIKRGYDDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LDPTGPQDDLSLPPSLSVDDEDSDYHQEAYKESYKDRRRRAHTQAEQKRRDAIKRGYDDL 10 20 30 40 50 60 70 80 90 100 110 120 fj1505 QTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVTALKIMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 QTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVTALKIMK 70 80 90 100 110 120 130 140 150 fj1505 VPSMPPSQWPASRSCQRVSSAGSRSTVSLRPCGRL ::::::::::::::::::::::::::::::::::: gi|620 VPSMPPSQWPASRSCQRVSSAGSRSTVSLRPCGRL 130 140 150 >>gi|55732673|emb|CAH93035.1| hypothetical protein [Pong (244 aa) initn: 666 init1: 666 opt: 673 Z-score: 782.5 bits: 151.6 E(): 6.1e-35 Smith-Waterman score: 673; 89.167% identity (93.333% similar) in 120 aa overlap (2-121:43-159) 10 20 30 fj1505 LDPTGPQDDLSLPPSLSVDDEDSDYHQEAYK . :: . :.: ..::::::::::::: gi|557 VKVEYAYSDNSLDPGLFVESTRKGSVVSRANSTGSTSASSVP---NTDDEDSDYHQEAYK 20 30 40 50 60 40 50 60 70 80 90 fj1505 ESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 ESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDY 70 80 90 100 110 120 100 110 120 130 140 150 fj1505 IQFLHKEKKKQEEEVSTLRKDVTALKIMKVPSMPPSQWPASRSCQRVSSAGSRSTVSLRP :::::::::::::::::::::::::::::: gi|557 IQFLHKEKKKQEEEVSTLRKDVTALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQ 130 140 150 160 170 180 >>gi|11761692|gb|AAG40145.1|AF213666_1 bHLHZip transcrip (214 aa) initn: 672 init1: 672 opt: 672 Z-score: 782.1 bits: 151.3 E(): 6.4e-35 Smith-Waterman score: 672; 98.131% identity (99.065% similar) in 107 aa overlap (15-121:23-129) 10 20 30 40 50 fj1505 LDPTGPQDDLSLPPSLSVDDEDSDYHQEAYKESYKDRRRRAHTQAEQKRRDA ::. :::::::::::::::::::::::::::::::::: gi|117 MTEPGASPEDPWVKVEYAYSDNSLDPDDEDSDYHQEAYKESYKDRRRRAHTQAEQKRRDA 10 20 30 40 50 60 60 70 80 90 100 110 fj1505 IKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTLRKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 IKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTLRKD 70 80 90 100 110 120 120 130 140 150 fj1505 VTALKIMKVPSMPPSQWPASRSCQRVSSAGSRSTVSLRPCGRL ::::::::: gi|117 VTALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMDSLFQSFNASISVASFQE 130 140 150 160 170 180 >>gi|119581247|gb|EAW60843.1| MAX-like protein X, isofor (214 aa) initn: 672 init1: 672 opt: 672 Z-score: 782.1 bits: 151.3 E(): 6.4e-35 Smith-Waterman score: 672; 98.131% identity (99.065% similar) in 107 aa overlap (15-121:23-129) 10 20 30 40 50 fj1505 LDPTGPQDDLSLPPSLSVDDEDSDYHQEAYKESYKDRRRRAHTQAEQKRRDA ::. :::::::::::::::::::::::::::::::::: gi|119 MTEPGASPEDPWVKVEYAYSDNSLDPDDEDSDYHQEAYKESYKDRRRRAHTQAEQKRRDA 10 20 30 40 50 60 60 70 80 90 100 110 fj1505 IKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTLRKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTLRKD 70 80 90 100 110 120 120 130 140 150 fj1505 VTALKIMKVPSMPPSQWPASRSCQRVSSAGSRSTVSLRPCGRL ::::::::: gi|119 VTALKIMKVNYEQIVKAHRDNPHEGEDQVSDQVKFNVFQGIMDSLFQSFNASISVASFQE 130 140 150 160 170 180 >>gi|114667200|ref|XP_001163510.1| PREDICTED: similar to (268 aa) initn: 672 init1: 672 opt: 672 Z-score: 780.8 bits: 151.4 E(): 7.6e-35 Smith-Waterman score: 672; 98.131% identity (99.065% similar) in 107 aa overlap (15-121:77-183) 10 20 30 40 fj1505 LDPTGPQDDLSLPPSLSVDDEDSDYHQEAYKESYKDRRRRAHTQ ::. :::::::::::::::::::::::::: gi|114 KSPTLSVPRGCREDSSHPACAKVEYAYSDNSLDPDDEDSDYHQEAYKESYKDRRRRAHTQ 50 60 70 80 90 100 50 60 70 80 90 100 fj1505 AEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEE 110 120 130 140 150 160 110 120 130 140 150 fj1505 EVSTLRKDVTALKIMKVPSMPPSQWPASRSCQRVSSAGSRSTVSLRPCGRL ::::::::::::::::: gi|114 EVSTLRKDVTALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMDSLFQSFNAS 170 180 190 200 210 220 >>gi|109115497|ref|XP_001110254.1| PREDICTED: MAX-like p (268 aa) initn: 672 init1: 672 opt: 672 Z-score: 780.8 bits: 151.4 E(): 7.6e-35 Smith-Waterman score: 672; 98.131% identity (99.065% similar) in 107 aa overlap (15-121:77-183) 10 20 30 40 fj1505 LDPTGPQDDLSLPPSLSVDDEDSDYHQEAYKESYKDRRRRAHTQ ::. :::::::::::::::::::::::::: gi|109 KSPMLSGPRGCREDSSHPACAKVEYAYSDNSLDPDDEDSDYHQEAYKESYKDRRRRAHTQ 50 60 70 80 90 100 50 60 70 80 90 100 fj1505 AEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEE 110 120 130 140 150 160 110 120 130 140 150 fj1505 EVSTLRKDVTALKIMKVPSMPPSQWPASRSCQRVSSAGSRSTVSLRPCGRL ::::::::::::::::: gi|109 EVSTLRKDVTALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMDSLFQSFNAS 170 180 190 200 210 220 >>gi|7020051|dbj|BAA90977.1| unnamed protein product [Ho (244 aa) initn: 666 init1: 666 opt: 667 Z-score: 775.6 bits: 150.3 E(): 1.5e-34 Smith-Waterman score: 667; 90.598% identity (94.017% similar) in 117 aa overlap (5-121:46-159) 10 20 30 fj1505 LDPTGPQDDLSLPPSLSVDDEDSDYHQEAYKESY : . :.: ..:::::::::::::::: gi|702 EYAYSDNSLDPGLFVESTRKGSVVSRANSIGSTSASSVP---NTDDEDSDYHQEAYKESY 20 30 40 50 60 70 40 50 60 70 80 90 fj1505 KDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|702 KDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQF 80 90 100 110 120 130 100 110 120 130 140 150 fj1505 LHKEKKKQEEEVSTLRKDVTALKIMKVPSMPPSQWPASRSCQRVSSAGSRSTVSLRPCGR ::::::::::::::::::::::::::: gi|702 LHKEKKKQEEEVSTLRKDVTALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIM 140 150 160 170 180 190 >>gi|11761694|gb|AAG40146.1|AF213667_1 bHLHZip transcrip (244 aa) initn: 666 init1: 666 opt: 667 Z-score: 775.6 bits: 150.3 E(): 1.5e-34 Smith-Waterman score: 667; 90.598% identity (94.017% similar) in 117 aa overlap (5-121:46-159) 10 20 30 fj1505 LDPTGPQDDLSLPPSLSVDDEDSDYHQEAYKESY : . :.: ..:::::::::::::::: gi|117 EYAYSDNSLDPGLFVESTRKGSVVSRANSIGSTSASSVP---NTDDEDSDYHQEAYKESY 20 30 40 50 60 70 40 50 60 70 80 90 fj1505 KDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 KDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQF 80 90 100 110 120 130 100 110 120 130 140 150 fj1505 LHKEKKKQEEEVSTLRKDVTALKIMKVPSMPPSQWPASRSCQRVSSAGSRSTVSLRPCGR ::::::::::::::::::::::::::: gi|117 LHKEKKKQEEEVSTLRKDVTALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIM 140 150 160 170 180 190 >>gi|109115495|ref|XP_001110383.1| PREDICTED: MAX-like p (244 aa) initn: 666 init1: 666 opt: 667 Z-score: 775.6 bits: 150.3 E(): 1.5e-34 Smith-Waterman score: 667; 90.598% identity (94.017% similar) in 117 aa overlap (5-121:46-159) 10 20 30 fj1505 LDPTGPQDDLSLPPSLSVDDEDSDYHQEAYKESY : . :.: ..:::::::::::::::: gi|109 EYAYSDNSLDPGLFVESTRKGNVVSRANSIGSTSASSVP---NTDDEDSDYHQEAYKESY 20 30 40 50 60 70 40 50 60 70 80 90 fj1505 KDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQF 80 90 100 110 120 130 100 110 120 130 140 150 fj1505 LHKEKKKQEEEVSTLRKDVTALKIMKVPSMPPSQWPASRSCQRVSSAGSRSTVSLRPCGR ::::::::::::::::::::::::::: gi|109 LHKEKKKQEEEVSTLRKDVTALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIM 140 150 160 170 180 190 >>gi|6503204|gb|AAF14638.1|AF203978_1 MAX-like bHLHZIP p (244 aa) initn: 666 init1: 666 opt: 667 Z-score: 775.6 bits: 150.3 E(): 1.5e-34 Smith-Waterman score: 667; 90.598% identity (94.017% similar) in 117 aa overlap (5-121:46-159) 10 20 30 fj1505 LDPTGPQDDLSLPPSLSVDDEDSDYHQEAYKESY : . :.: ..:::::::::::::::: gi|650 EYAYSDNSLDPGLFVESTRKGSVVSRANSIGSTSASSVP---NTDDEDSDYHQEAYKESY 20 30 40 50 60 70 40 50 60 70 80 90 fj1505 KDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|650 KDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQF 80 90 100 110 120 130 100 110 120 130 140 150 fj1505 LHKEKKKQEEEVSTLRKDVTALKIMKVPSMPPSQWPASRSCQRVSSAGSRSTVSLRPCGR ::::::::::::::::::::::::::: gi|650 LHKEKKKQEEEVSTLRKDVTALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIM 140 150 160 170 180 190 155 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Sun Aug 10 15:44:09 2008 done: Sun Aug 10 15:47:09 2008 Total Scan time: 571.290 Total Display time: 0.020 Function used was FASTA [version 34.26.5 April 26, 2007]