# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofj15089.fasta.nr -Q fj15089.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fj15089, 921 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6838562 sequences Expectation_n fit: rho(ln(x))= 5.5280+/-0.000187; mu= 12.3102+/- 0.010 mean_var=80.0417+/-15.687, 0's: 27 Z-trim: 63 B-trim: 354 in 2/66 Lambda= 0.143356 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62087430|dbj|BAD92162.1| protocadherin alpha 4 ( 921) 6033 1257.9 0 gi|13878424|sp|Q9UN74.1|PCDA4_HUMAN Protocadherin ( 947) 5754 1200.2 0 gi|119582417|gb|EAW62013.1| hCG1982192, isoform CR ( 947) 5725 1194.2 0 gi|62510900|sp|Q5DRE8.1|PCDA4_PANTR Protocadherin ( 947) 5703 1189.7 0 gi|74149732|dbj|BAE43859.1| Protocadherin alpha [M ( 947) 5546 1157.2 0 gi|119582402|gb|EAW61998.1| hCG1982192, isoform CR ( 798) 5124 1069.9 0 gi|74143413|dbj|BAE28788.1| unnamed protein produc ( 919) 4970 1038.1 0 gi|81908469|sp|O88689.1|PCDA4_MOUSE Protocadherin ( 947) 4970 1038.1 0 gi|109078951|ref|XP_001088407.1| PREDICTED: simila ( 798) 4939 1031.6 0 gi|81911821|sp|Q767I8.1|PCDA4_RAT Protocadherin al ( 947) 4902 1024.0 0 gi|62087428|dbj|BAD92161.1| protocadherin alpha 13 ( 921) 4816 1006.2 0 gi|13878429|sp|Q9Y5H8.1|PCDA3_HUMAN Protocadherin ( 950) 4796 1002.1 0 gi|128485564|ref|NP_001076055.1| protocadherin alp ( 950) 4791 1001.1 0 gi|62510901|sp|Q5DRE9.1|PCDA3_PANTR Protocadherin ( 950) 4785 999.8 0 gi|109078949|ref|XP_001088201.1| PREDICTED: protoc ( 950) 4782 999.2 0 gi|62510895|sp|Q5DRE3.1|PCDA9_PANTR Protocadherin ( 950) 4777 998.2 0 gi|119582396|gb|EAW61992.1| hCG1982192, isoform CR ( 950) 4772 997.1 0 gi|74149742|dbj|BAE43864.1| Protocadherin alpha [M ( 950) 4769 996.5 0 gi|119582398|gb|EAW61994.1| hCG1982192, isoform CR ( 950) 4765 995.7 0 gi|13878426|sp|Q9Y5H5.1|PCDA9_HUMAN Protocadherin ( 950) 4761 994.9 0 gi|74149730|dbj|BAE43858.1| Protocadherin alpha [M ( 952) 4745 991.5 0 gi|114602223|ref|XP_001142452.1| PREDICTED: simila ( 903) 4736 989.7 0 gi|62510902|sp|Q5DRF0.1|PCDA2_PANTR Protocadherin ( 948) 4683 978.7 0 gi|13878430|sp|Q9Y5H9.1|PCDA2_HUMAN Protocadherin ( 948) 4681 978.3 0 gi|119582397|gb|EAW61993.1| hCG1982192, isoform CR ( 948) 4680 978.1 0 gi|13878431|sp|Q9Y5I0.1|PCDAD_HUMAN Protocadherin ( 950) 4663 974.6 0 gi|62510903|sp|Q5DRF1.1|PCDAD_PANTR Protocadherin ( 950) 4651 972.1 0 gi|74149726|dbj|BAE43856.1| Protocadherin alpha [M ( 950) 4619 965.5 0 gi|51895871|gb|AAH82326.1| Pcdha1 protein [Mus mus ( 902) 4616 964.8 0 gi|74149748|dbj|BAE43867.1| Protocadherin alpha [M ( 949) 4614 964.4 0 gi|13878423|sp|Q9UN73.1|PCDA6_HUMAN Protocadherin ( 950) 4596 960.7 0 gi|119582416|gb|EAW62012.1| hCG1982192, isoform CR ( 959) 4596 960.7 0 gi|119582395|gb|EAW61991.1| hCG1982192, isoform CR ( 950) 4590 959.5 0 gi|13878434|sp|Q9Y5I3.1|PCDA1_HUMAN Protocadherin ( 950) 4589 959.3 0 gi|62510898|sp|Q5DRE6.1|PCDA6_PANTR Protocadherin ( 950) 4589 959.3 0 gi|128485459|ref|NP_001076060.1| protocadherin alp ( 959) 4589 959.3 0 gi|62510905|sp|Q5DRF3.1|PCDAB_PANTR Protocadherin ( 949) 4588 959.1 0 gi|128485445|ref|NP_001076057.1| protocadherin alp ( 949) 4586 958.7 0 gi|119582394|gb|EAW61990.1| hCG1982192, isoform CR ( 950) 4585 958.5 0 gi|62510896|sp|Q5DRE4.1|PCDA8_PANTR Protocadherin ( 950) 4578 957.0 0 gi|74149728|dbj|BAE43857.1| Protocadherin alpha [M ( 948) 4576 956.6 0 gi|154757543|gb|AAI51665.1| PCDHA13 protein [Bos t ( 950) 4574 956.2 0 gi|13878427|sp|Q9Y5H6.1|PCDA8_HUMAN Protocadherin ( 950) 4573 956.0 0 gi|62510907|sp|Q5DRF5.1|PCDA1_PANTR Protocadherin ( 950) 4558 952.9 0 gi|40645538|dbj|BAD06376.1| cadherin-related neuro ( 947) 4549 951.0 0 gi|13878432|sp|Q9Y5I1.1|PCDAB_HUMAN Protocadherin ( 949) 4547 950.6 0 gi|74149744|dbj|BAE43865.1| Protocadherin alpha [M ( 949) 4542 949.6 0 gi|13876252|gb|AAK26046.1| protocadherin alpha 10 ( 946) 4539 948.9 0 gi|13876270|gb|AAK26055.1| protocadherin alpha 8 [ ( 946) 4528 946.7 0 gi|13878433|sp|Q9Y5I2.1|PCDAA_HUMAN Protocadherin ( 948) 4506 942.1 0 >>gi|62087430|dbj|BAD92162.1| protocadherin alpha 4 isof (921 aa) initn: 6033 init1: 6033 opt: 6033 Z-score: 6737.4 bits: 1257.9 E(): 0 Smith-Waterman score: 6033; 100.000% identity (100.000% similar) in 921 aa overlap (1-921:1-921) 10 20 30 40 50 60 fj1508 KISLDFEKRYLIRTKYCALKMEFSWGSGQESRRLLLLLLLLAAWEAGNGQLHYSVSEEAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 KISLDFEKRYLIRTKYCALKMEFSWGSGQESRRLLLLLLLLAAWEAGNGQLHYSVSEEAK 10 20 30 40 50 60 70 80 90 100 110 120 fj1508 HGTFVGRIAQDLGLELAELVPRLFRVASKGRGGLLEVNLQNGILFVNSRIDREELCRRSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 HGTFVGRIAQDLGLELAELVPRLFRVASKGRGGLLEVNLQNGILFVNSRIDREELCRRSA 70 80 90 100 110 120 130 140 150 160 170 180 fj1508 ECSIHLEVIVDRPLQVFHVDVEVRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ECSIHLEVIVDRPLQVFHVDVEVRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDA 130 140 150 160 170 180 190 200 210 220 230 240 fj1508 DIGENALLTYRLSPNEYFSLEKPPDDELVKGLGLILRKSLDREEAPEIFLVLTATDGGKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DIGENALLTYRLSPNEYFSLEKPPDDELVKGLGLILRKSLDREEAPEIFLVLTATDGGKP 190 200 210 220 230 240 250 260 270 280 290 300 fj1508 ELTGTVQLLITVLDANDNAPAFDRTIYKVRLLENVPNGTLVIKLNASDLDEGLNGDIVYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ELTGTVQLLITVLDANDNAPAFDRTIYKVRLLENVPNGTLVIKLNASDLDEGLNGDIVYS 250 260 270 280 290 300 310 320 330 340 350 360 fj1508 FSNDISPNVKSKFHIDPITGQIIVKGYIDFEESKSYEIIVEGIDKGQLPLSGHCRVIVEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 FSNDISPNVKSKFHIDPITGQIIVKGYIDFEESKSYEIIVEGIDKGQLPLSGHCRVIVEV 310 320 330 340 350 360 370 380 390 400 410 420 fj1508 EDNNDNVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVNGLVTCSLTSHVPFKLVST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EDNNDNVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVNGLVTCSLTSHVPFKLVST 370 380 390 400 410 420 430 440 450 460 470 480 fj1508 FKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 FKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEY 430 440 450 460 470 480 490 500 510 520 530 540 fj1508 TVFVKENNPPGCHIFTVSAWDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TVFVKENNPPGCHIFTVSAWDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYAL 490 500 510 520 530 540 550 560 570 580 590 600 fj1508 QPLDHEELELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPALLAPRAGGTGGAVSEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 QPLDHEELELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPALLAPRAGGTGGAVSEL 550 560 570 580 590 600 610 620 630 640 650 660 fj1508 VPWSVGVGHVVAKVRAVDADSGYNAWLSYELQPGTGGARIPFRVGLYTGEISTTRALDET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VPWSVGVGHVVAKVRAVDADSGYNAWLSYELQPGTGGARIPFRVGLYTGEISTTRALDET 610 620 630 640 650 660 670 680 690 700 710 720 fj1508 DAPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRALVGAVGPDAALVDVNVYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DAPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRALVGAVGPDAALVDVNVYL 670 680 690 700 710 720 730 740 750 760 770 780 fj1508 IIAICAVSSLLVLTLLLYTALRCSALPTEGACAPGKPTLVCSSAVGSWSYSQQRRPRVCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 IIAICAVSSLLVLTLLLYTALRCSALPTEGACAPGKPTLVCSSAVGSWSYSQQRRPRVCS 730 740 750 760 770 780 790 800 810 820 830 840 fj1508 GEGPPKTDLMAFSPSLPDSRDREDQLQTTEESFAKPRQPNPDWRYSASLRAGMHSSVHLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GEGPPKTDLMAFSPSLPDSRDREDQLQTTEESFAKPRQPNPDWRYSASLRAGMHSSVHLE 790 800 810 820 830 840 850 860 870 880 890 900 fj1508 EAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPEP 850 860 870 880 890 900 910 920 fj1508 KKQTQVSFLLRRKGEASQPRQ ::::::::::::::::::::: gi|620 KKQTQVSFLLRRKGEASQPRQ 910 920 >>gi|13878424|sp|Q9UN74.1|PCDA4_HUMAN Protocadherin alph (947 aa) initn: 5754 init1: 5754 opt: 5754 Z-score: 6425.4 bits: 1200.2 E(): 0 Smith-Waterman score: 5754; 100.000% identity (100.000% similar) in 878 aa overlap (21-898:1-878) 10 20 30 40 50 60 fj1508 KISLDFEKRYLIRTKYCALKMEFSWGSGQESRRLLLLLLLLAAWEAGNGQLHYSVSEEAK :::::::::::::::::::::::::::::::::::::::: gi|138 MEFSWGSGQESRRLLLLLLLLAAWEAGNGQLHYSVSEEAK 10 20 30 40 70 80 90 100 110 120 fj1508 HGTFVGRIAQDLGLELAELVPRLFRVASKGRGGLLEVNLQNGILFVNSRIDREELCRRSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 HGTFVGRIAQDLGLELAELVPRLFRVASKGRGGLLEVNLQNGILFVNSRIDREELCRRSA 50 60 70 80 90 100 130 140 150 160 170 180 fj1508 ECSIHLEVIVDRPLQVFHVDVEVRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 ECSIHLEVIVDRPLQVFHVDVEVRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDA 110 120 130 140 150 160 190 200 210 220 230 240 fj1508 DIGENALLTYRLSPNEYFSLEKPPDDELVKGLGLILRKSLDREEAPEIFLVLTATDGGKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 DIGENALLTYRLSPNEYFSLEKPPDDELVKGLGLILRKSLDREEAPEIFLVLTATDGGKP 170 180 190 200 210 220 250 260 270 280 290 300 fj1508 ELTGTVQLLITVLDANDNAPAFDRTIYKVRLLENVPNGTLVIKLNASDLDEGLNGDIVYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 ELTGTVQLLITVLDANDNAPAFDRTIYKVRLLENVPNGTLVIKLNASDLDEGLNGDIVYS 230 240 250 260 270 280 310 320 330 340 350 360 fj1508 FSNDISPNVKSKFHIDPITGQIIVKGYIDFEESKSYEIIVEGIDKGQLPLSGHCRVIVEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 FSNDISPNVKSKFHIDPITGQIIVKGYIDFEESKSYEIIVEGIDKGQLPLSGHCRVIVEV 290 300 310 320 330 340 370 380 390 400 410 420 fj1508 EDNNDNVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVNGLVTCSLTSHVPFKLVST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 EDNNDNVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVNGLVTCSLTSHVPFKLVST 350 360 370 380 390 400 430 440 450 460 470 480 fj1508 FKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 FKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEY 410 420 430 440 450 460 490 500 510 520 530 540 fj1508 TVFVKENNPPGCHIFTVSAWDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 TVFVKENNPPGCHIFTVSAWDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYAL 470 480 490 500 510 520 550 560 570 580 590 600 fj1508 QPLDHEELELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPALLAPRAGGTGGAVSEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 QPLDHEELELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPALLAPRAGGTGGAVSEL 530 540 550 560 570 580 610 620 630 640 650 660 fj1508 VPWSVGVGHVVAKVRAVDADSGYNAWLSYELQPGTGGARIPFRVGLYTGEISTTRALDET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 VPWSVGVGHVVAKVRAVDADSGYNAWLSYELQPGTGGARIPFRVGLYTGEISTTRALDET 590 600 610 620 630 640 670 680 690 700 710 720 fj1508 DAPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRALVGAVGPDAALVDVNVYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 DAPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRALVGAVGPDAALVDVNVYL 650 660 670 680 690 700 730 740 750 760 770 780 fj1508 IIAICAVSSLLVLTLLLYTALRCSALPTEGACAPGKPTLVCSSAVGSWSYSQQRRPRVCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 IIAICAVSSLLVLTLLLYTALRCSALPTEGACAPGKPTLVCSSAVGSWSYSQQRRPRVCS 710 720 730 740 750 760 790 800 810 820 830 840 fj1508 GEGPPKTDLMAFSPSLPDSRDREDQLQTTEESFAKPRQPNPDWRYSASLRAGMHSSVHLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 GEGPPKTDLMAFSPSLPDSRDREDQLQTTEESFAKPRQPNPDWRYSASLRAGMHSSVHLE 770 780 790 800 810 820 850 860 870 880 890 900 fj1508 EAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 EAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGE 830 840 850 860 870 880 910 920 fj1508 KKQTQVSFLLRRKGEASQPRQ gi|138 LPDKFIIPGSPAIISIRQEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNS 890 900 910 920 930 940 >>gi|119582417|gb|EAW62013.1| hCG1982192, isoform CRA_ab (947 aa) initn: 5725 init1: 5725 opt: 5725 Z-score: 6393.0 bits: 1194.2 E(): 0 Smith-Waterman score: 5725; 99.658% identity (99.772% similar) in 878 aa overlap (21-898:1-878) 10 20 30 40 50 60 fj1508 KISLDFEKRYLIRTKYCALKMEFSWGSGQESRRLLLLLLLLAAWEAGNGQLHYSVSEEAK :::::::::::::::::::::::::::::::::::::::: gi|119 MEFSWGSGQESRRLLLLLLLLAAWEAGNGQLHYSVSEEAK 10 20 30 40 70 80 90 100 110 120 fj1508 HGTFVGRIAQDLGLELAELVPRLFRVASKGRGGLLEVNLQNGILFVNSRIDREELCRRSA ::::::::::::::::::::::::::::: . :::::::::::::::::::::::::::: gi|119 HGTFVGRIAQDLGLELAELVPRLFRVASKRHRGLLEVNLQNGILFVNSRIDREELCRRSA 50 60 70 80 90 100 130 140 150 160 170 180 fj1508 ECSIHLEVIVDRPLQVFHVDVEVRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ECSIHLEVIVDRPLQVFHVDVEVRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDA 110 120 130 140 150 160 190 200 210 220 230 240 fj1508 DIGENALLTYRLSPNEYFSLEKPPDDELVKGLGLILRKSLDREEAPEIFLVLTATDGGKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DIGENALLTYRLSPNEYFSLEKPPDDELVKGLGLILRKSLDREEAPEIFLVLTATDGGKP 170 180 190 200 210 220 250 260 270 280 290 300 fj1508 ELTGTVQLLITVLDANDNAPAFDRTIYKVRLLENVPNGTLVIKLNASDLDEGLNGDIVYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ELTGTVQLLITVLDANDNAPAFDRTIYKVRLLENVPNGTLVIKLNASDLDEGLNGDIVYS 230 240 250 260 270 280 310 320 330 340 350 360 fj1508 FSNDISPNVKSKFHIDPITGQIIVKGYIDFEESKSYEIIVEGIDKGQLPLSGHCRVIVEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FSNDISPNVKSKFHIDPITGQIIVKGYIDFEESKSYEIIVEGIDKGQLPLSGHCRVIVEV 290 300 310 320 330 340 370 380 390 400 410 420 fj1508 EDNNDNVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVNGLVTCSLTSHVPFKLVST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EDNNDNVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVNGLVTCSLTSHVPFKLVST 350 360 370 380 390 400 430 440 450 460 470 480 fj1508 FKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEY 410 420 430 440 450 460 490 500 510 520 530 540 fj1508 TVFVKENNPPGCHIFTVSAWDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TVFVKENNPPGCHIFTVSAWDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYAL 470 480 490 500 510 520 550 560 570 580 590 600 fj1508 QPLDHEELELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPALLAPRAGGTGGAVSEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QPLDHEELELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPALLAPRAGGTGGAVSEL 530 540 550 560 570 580 610 620 630 640 650 660 fj1508 VPWSVGVGHVVAKVRAVDADSGYNAWLSYELQPGTGGARIPFRVGLYTGEISTTRALDET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VPWSVGVGHVVAKVRAVDADSGYNAWLSYELQPGTGGARIPFRVGLYTGEISTTRALDET 590 600 610 620 630 640 670 680 690 700 710 720 fj1508 DAPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRALVGAVGPDAALVDVNVYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DAPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRALVGAVGPDAALVDVNVYL 650 660 670 680 690 700 730 740 750 760 770 780 fj1508 IIAICAVSSLLVLTLLLYTALRCSALPTEGACAPGKPTLVCSSAVGSWSYSQQRRPRVCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IIAICAVSSLLVLTLLLYTALRCSALPTEGACAPGKPTLVCSSAVGSWSYSQQRRPRVCS 710 720 730 740 750 760 790 800 810 820 830 840 fj1508 GEGPPKTDLMAFSPSLPDSRDREDQLQTTEESFAKPRQPNPDWRYSASLRAGMHSSVHLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GEGPPKTDLMAFSPSLPDSRDREDQLQTTEESFAKPRQPNPDWRYSASLRAGMHSSVHLE 770 780 790 800 810 820 850 860 870 880 890 900 fj1508 EAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGE 830 840 850 860 870 880 910 920 fj1508 KKQTQVSFLLRRKGEASQPRQ gi|119 LPDKFIIPGSPAIISIRQEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNS 890 900 910 920 930 940 >>gi|62510900|sp|Q5DRE8.1|PCDA4_PANTR Protocadherin alph (947 aa) initn: 5703 init1: 5703 opt: 5703 Z-score: 6368.4 bits: 1189.7 E(): 0 Smith-Waterman score: 5703; 99.203% identity (99.544% similar) in 878 aa overlap (21-898:1-878) 10 20 30 40 50 60 fj1508 KISLDFEKRYLIRTKYCALKMEFSWGSGQESRRLLLLLLLLAAWEAGNGQLHYSVSEEAK :::::::::::::::::::::.:::::::::::::::::: gi|625 MEFSWGSGQESRRLLLLLLLLSAWEAGNGQLHYSVSEEAK 10 20 30 40 70 80 90 100 110 120 fj1508 HGTFVGRIAQDLGLELAELVPRLFRVASKGRGGLLEVNLQNGILFVNSRIDREELCRRSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 HGTFVGRIAQDLGLELAELVPRLFRVASKGRGGLLEVNLQNGILFVNSRIDREELCRRSA 50 60 70 80 90 100 130 140 150 160 170 180 fj1508 ECSIHLEVIVDRPLQVFHVDVEVRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 ECSIHLEVIVDRPLQVFHVDVEVRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDA 110 120 130 140 150 160 190 200 210 220 230 240 fj1508 DIGENALLTYRLSPNEYFSLEKPPDDELVKGLGLILRKSLDREEAPEIFLVLTATDGGKP ::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: gi|625 DIGENALLTYRLSPNEYFSLEKPSDDELVKGLGLILRKSLDREEAPEIFLVLTATDGGKP 170 180 190 200 210 220 250 260 270 280 290 300 fj1508 ELTGTVQLLITVLDANDNAPAFDRTIYKVRLLENVPNGTLVIKLNASDLDEGLNGDIVYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|625 ELTGTVQLLITVLDANDNAPAFDRTIYKVRLLENVPNGTLVIKLNASDLDEGLNGDIIYS 230 240 250 260 270 280 310 320 330 340 350 360 fj1508 FSNDISPNVKSKFHIDPITGQIIVKGYIDFEESKSYEIIVEGIDKGQLPLSGHCRVIVEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 FSNDISPNVKSKFHIDPITGQIIVKGYIDFEESKSYEIIVEGIDKGQLPLSGHCRVIVEV 290 300 310 320 330 340 370 380 390 400 410 420 fj1508 EDNNDNVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVNGLVTCSLTSHVPFKLVST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 EDNNDNVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVNGLVTCSLTSHVPFKLVST 350 360 370 380 390 400 430 440 450 460 470 480 fj1508 FKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 FKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEY 410 420 430 440 450 460 490 500 510 520 530 540 fj1508 TVFVKENNPPGCHIFTVSAWDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 TVFVKENNPPGCHIFTVSAWDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYAL 470 480 490 500 510 520 550 560 570 580 590 600 fj1508 QPLDHEELELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPALLAPRAGGTGGAVSEL ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|625 QPLDHEELELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPALLAHRAGGTGGAVSEL 530 540 550 560 570 580 610 620 630 640 650 660 fj1508 VPWSVGVGHVVAKVRAVDADSGYNAWLSYELQPGTGGARIPFRVGLYTGEISTTRALDET ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 VPWSVGVDHVVAKVRAVDADSGYNAWLSYELQPGTGGARIPFRVGLYTGEISTTRALDET 590 600 610 620 630 640 670 680 690 700 710 720 fj1508 DAPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRALVGAVGPDAALVDVNVYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 DAPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRALVGAVGPDAALVDVNVYL 650 660 670 680 690 700 730 740 750 760 770 780 fj1508 IIAICAVSSLLVLTLLLYTALRCSALPTEGACAPGKPTLVCSSAVGSWSYSQQRRPRVCS ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: gi|625 IIAICAVSSLLVLTLLLYTALRCSAPPTEGACAPGKPTLVCSSAVGSWSYSQQRRPRVCS 710 720 730 740 750 760 790 800 810 820 830 840 fj1508 GEGPPKTDLMAFSPSLPDSRDREDQLQTTEESFAKPRQPNPDWRYSASLRAGMHSSVHLE ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|625 GEGPPKTDLMAFSPSLPDSRDREDELQTTEESFAKPRQPNPDWRYSASLRAGMHSSVHLE 770 780 790 800 810 820 850 860 870 880 890 900 fj1508 EAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 EAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGE 830 840 850 860 870 880 910 920 fj1508 KKQTQVSFLLRRKGEASQPRQ gi|625 LPDKFIIPGSPAIISIRQEPANSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNS 890 900 910 920 930 940 >>gi|74149732|dbj|BAE43859.1| Protocadherin alpha [Macac (947 aa) initn: 5546 init1: 5546 opt: 5546 Z-score: 6192.9 bits: 1157.2 E(): 0 Smith-Waterman score: 5546; 96.469% identity (98.405% similar) in 878 aa overlap (21-898:1-878) 10 20 30 40 50 60 fj1508 KISLDFEKRYLIRTKYCALKMEFSWGSGQESRRLLLLLLLLAAWEAGNGQLHYSVSEEAK ::::::::::::::::::::::.::::::::::::::::: gi|741 MEFSWGSGQESRRLLLLLLLLATWEAGNGQLHYSVSEEAK 10 20 30 40 70 80 90 100 110 120 fj1508 HGTFVGRIAQDLGLELAELVPRLFRVASKGRGGLLEVNLQNGILFVNSRIDREELCRRSA :::::::::::::::::::::::::::::.:: ::::::::::::::::::::::: .. gi|741 HGTFVGRIAQDLGLELAELVPRLFRVASKSRGDLLEVNLQNGILFVNSRIDREELCGWNS 50 60 70 80 90 100 130 140 150 160 170 180 fj1508 ECSIHLEVIVDRPLQVFHVDVEVRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDA ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ECSIHLEVIVDGPLQVFHVDVEVRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDA 110 120 130 140 150 160 190 200 210 220 230 240 fj1508 DIGENALLTYRLSPNEYFSLEKPPDDELVKGLGLILRKSLDREEAPEIFLVLTATDGGKP ::::::::::::::::::::::: :::::::::::: ::::::::::::::::::::::: gi|741 DIGENALLTYRLSPNEYFSLEKPSDDELVKGLGLILWKSLDREEAPEIFLVLTATDGGKP 170 180 190 200 210 220 250 260 270 280 290 300 fj1508 ELTGTVQLLITVLDANDNAPAFDRTIYKVRLLENVPNGTLVIKLNASDLDEGLNGDIVYS :::::.:::::::::::::::::::.::::: :::::::::::::::::::::::::::: gi|741 ELTGTIQLLITVLDANDNAPAFDRTLYKVRLPENVPNGTLVIKLNASDLDEGLNGDIVYS 230 240 250 260 270 280 310 320 330 340 350 360 fj1508 FSNDISPNVKSKFHIDPITGQIIVKGYIDFEESKSYEIIVEGIDKGQLPLSGHCRVIVEV ::::.::::::::::::::::::::::::::::::::::::::: ::::::::::::::: gi|741 FSNDVSPNVKSKFHIDPITGQIIVKGYIDFEESKSYEIIVEGIDMGQLPLSGHCRVIVEV 290 300 310 320 330 340 370 380 390 400 410 420 fj1508 EDNNDNVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVNGLVTCSLTSHVPFKLVST :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 EDNNDHVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVNGLVTCSLTSHVPFKLVST 350 360 370 380 390 400 430 440 450 460 470 480 fj1508 FKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 FKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEY 410 420 430 440 450 460 490 500 510 520 530 540 fj1508 TVFVKENNPPGCHIFTVSAWDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYAL ::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: gi|741 TVFVKENNPPGCHIFTVSARDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYAL 470 480 490 500 510 520 550 560 570 580 590 600 fj1508 QPLDHEELELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPALLAPRAGGTGGAVSEL :::::::::::::::.::::::: :::::::::::::::::::::::::::: ::.:.:: gi|741 QPLDHEELELLQFQVSARDAGVPSLGSNVTLQVFVLDENDNAPALLAPRAGGIGGSVNEL 530 540 550 560 570 580 610 620 630 640 650 660 fj1508 VPWSVGVGHVVAKVRAVDADSGYNAWLSYELQPGTGGARIPFRVGLYTGEISTTRALDET ::::::.:::::::::::::::::::::::::::::: :::::::::::::::::.:::. gi|741 VPWSVGAGHVVAKVRAVDADSGYNAWLSYELQPGTGGMRIPFRVGLYTGEISTTRVLDEA 590 600 610 620 630 640 670 680 690 700 710 720 fj1508 DAPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRALVGAVGPDAALVDVNVYL :::::::::::::::.::::::::::::::::::::::::::: :::::..::::::::: gi|741 DAPRHRLLVLVKDHGKPALTATATVLVSLVESGQAPKASSRALSGAVGPEVALVDVNVYL 650 660 670 680 690 700 730 740 750 760 770 780 fj1508 IIAICAVSSLLVLTLLLYTALRCSALPTEGACAPGKPTLVCSSAVGSWSYSQQRRPRVCS ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: gi|741 IIAICAVSSLLVLTLLLYTALRCSAPPTEGACAPGKPTLVCSSAVGSWSYSQQRRPRVCS 710 720 730 740 750 760 790 800 810 820 830 840 fj1508 GEGPPKTDLMAFSPSLPDSRDREDQLQTTEESFAKPRQPNPDWRYSASLRAGMHSSVHLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 GEGPPKTDLMAFSPSLPDSRDREDQLQTTEESFAKPRQPNPDWRYSASLRAGMHSSVHLE 770 780 790 800 810 820 850 860 870 880 890 900 fj1508 EAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 EAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGE 830 840 850 860 870 880 910 920 fj1508 KKQTQVSFLLRRKGEASQPRQ gi|741 LPDKFIIPGSPAIISIRQEPTNNQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNS 890 900 910 920 930 940 >>gi|119582402|gb|EAW61998.1| hCG1982192, isoform CRA_m (798 aa) initn: 5124 init1: 5124 opt: 5124 Z-score: 5722.3 bits: 1069.9 E(): 0 Smith-Waterman score: 5124; 99.623% identity (99.748% similar) in 795 aa overlap (21-815:1-795) 10 20 30 40 50 60 fj1508 KISLDFEKRYLIRTKYCALKMEFSWGSGQESRRLLLLLLLLAAWEAGNGQLHYSVSEEAK :::::::::::::::::::::::::::::::::::::::: gi|119 MEFSWGSGQESRRLLLLLLLLAAWEAGNGQLHYSVSEEAK 10 20 30 40 70 80 90 100 110 120 fj1508 HGTFVGRIAQDLGLELAELVPRLFRVASKGRGGLLEVNLQNGILFVNSRIDREELCRRSA ::::::::::::::::::::::::::::: . :::::::::::::::::::::::::::: gi|119 HGTFVGRIAQDLGLELAELVPRLFRVASKRHRGLLEVNLQNGILFVNSRIDREELCRRSA 50 60 70 80 90 100 130 140 150 160 170 180 fj1508 ECSIHLEVIVDRPLQVFHVDVEVRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ECSIHLEVIVDRPLQVFHVDVEVRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDA 110 120 130 140 150 160 190 200 210 220 230 240 fj1508 DIGENALLTYRLSPNEYFSLEKPPDDELVKGLGLILRKSLDREEAPEIFLVLTATDGGKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DIGENALLTYRLSPNEYFSLEKPPDDELVKGLGLILRKSLDREEAPEIFLVLTATDGGKP 170 180 190 200 210 220 250 260 270 280 290 300 fj1508 ELTGTVQLLITVLDANDNAPAFDRTIYKVRLLENVPNGTLVIKLNASDLDEGLNGDIVYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ELTGTVQLLITVLDANDNAPAFDRTIYKVRLLENVPNGTLVIKLNASDLDEGLNGDIVYS 230 240 250 260 270 280 310 320 330 340 350 360 fj1508 FSNDISPNVKSKFHIDPITGQIIVKGYIDFEESKSYEIIVEGIDKGQLPLSGHCRVIVEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FSNDISPNVKSKFHIDPITGQIIVKGYIDFEESKSYEIIVEGIDKGQLPLSGHCRVIVEV 290 300 310 320 330 340 370 380 390 400 410 420 fj1508 EDNNDNVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVNGLVTCSLTSHVPFKLVST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EDNNDNVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVNGLVTCSLTSHVPFKLVST 350 360 370 380 390 400 430 440 450 460 470 480 fj1508 FKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEY 410 420 430 440 450 460 490 500 510 520 530 540 fj1508 TVFVKENNPPGCHIFTVSAWDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TVFVKENNPPGCHIFTVSAWDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYAL 470 480 490 500 510 520 550 560 570 580 590 600 fj1508 QPLDHEELELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPALLAPRAGGTGGAVSEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QPLDHEELELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPALLAPRAGGTGGAVSEL 530 540 550 560 570 580 610 620 630 640 650 660 fj1508 VPWSVGVGHVVAKVRAVDADSGYNAWLSYELQPGTGGARIPFRVGLYTGEISTTRALDET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VPWSVGVGHVVAKVRAVDADSGYNAWLSYELQPGTGGARIPFRVGLYTGEISTTRALDET 590 600 610 620 630 640 670 680 690 700 710 720 fj1508 DAPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRALVGAVGPDAALVDVNVYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DAPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRALVGAVGPDAALVDVNVYL 650 660 670 680 690 700 730 740 750 760 770 780 fj1508 IIAICAVSSLLVLTLLLYTALRCSALPTEGACAPGKPTLVCSSAVGSWSYSQQRRPRVCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IIAICAVSSLLVLTLLLYTALRCSALPTEGACAPGKPTLVCSSAVGSWSYSQQRRPRVCS 710 720 730 740 750 760 790 800 810 820 830 840 fj1508 GEGPPKTDLMAFSPSLPDSRDREDQLQTTEESFAKPRQPNPDWRYSASLRAGMHSSVHLE ::::::::::::::::::::::::::::::::::: gi|119 GEGPPKTDLMAFSPSLPDSRDREDQLQTTEESFAKVSV 770 780 790 850 860 870 880 890 900 fj1508 EAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPEP >>gi|74143413|dbj|BAE28788.1| unnamed protein product [M (919 aa) initn: 4970 init1: 4970 opt: 4970 Z-score: 5549.3 bits: 1038.1 E(): 0 Smith-Waterman score: 4970; 85.535% identity (94.875% similar) in 878 aa overlap (21-898:1-878) 10 20 30 40 50 60 fj1508 KISLDFEKRYLIRTKYCALKMEFSWGSGQESRRLLLLLLLLAAWEAGNGQLHYSVSEEAK :::::::::::.:::: .:::: :::::.:.:::. :::: gi|741 MEFSWGSGQESQRLLLSFLLLAIWEAGNSQIHYSIPEEAK 10 20 30 40 70 80 90 100 110 120 fj1508 HGTFVGRIAQDLGLELAELVPRLFRVASKGRGGLLEVNLQNGILFVNSRIDREELCRRSA ::::::::::::::::.:::::::::::: :: ::::::::::::::::::::::: ::: gi|741 HGTFVGRIAQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSA 50 60 70 80 90 100 130 140 150 160 170 180 fj1508 ECSIHLEVIVDRPLQVFHVDVEVRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDA :::::::::::::::::::.::::::::::: ::.::::: ::::::::. ::::::::: gi|741 ECSIHLEVIVDRPLQVFHVEVEVRDINDNPPRFPTTQKNLFIAESRPLDTWFPLEGASDA 110 120 130 140 150 160 190 200 210 220 230 240 fj1508 DIGENALLTYRLSPNEYFSLEKPPDDELVKGLGLILRKSLDREEAPEIFLVLTATDGGKP ::: ::.::::::::.::::::: .:: ::::::.:::::::::.:::.::::.:::::: gi|741 DIGINAVLTYRLSPNDYFSLEKPSNDERVKGLGLVLRKSLDREETPEIILVLTVTDGGKP 170 180 190 200 210 220 250 260 270 280 290 300 fj1508 ELTGTVQLLITVLDANDNAPAFDRTIYKVRLLENVPNGTLVIKLNASDLDEGLNGDIVYS ::::.:::::::::::::::.:::..: :.: :::::::::.:.::::::::.::::.:: gi|741 ELTGSVQLLITVLDANDNAPVFDRSLYTVKLPENVPNGTLVVKVNASDLDEGVNGDIMYS 230 240 250 260 270 280 310 320 330 340 350 360 fj1508 FSNDISPNVKSKFHIDPITGQIIVKGYIDFEESKSYEIIVEGIDKGQLPLSGHCRVIVEV ::.::::::: ::::::..:.::::::::::: :::::..::::::::::::::.:::.: gi|741 FSTDISPNVKYKFHIDPVSGEIIVKGYIDFEECKSYEILIEGIDKGQLPLSGHCKVIVQV 290 300 310 320 330 340 370 380 390 400 410 420 fj1508 EDNNDNVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVNGLVTCSLTSHVPFKLVST :: :::::.::::::::::::..:.:::::::::::.: :::: :::::::::::::::: gi|741 EDINDNVPELEFKSLSLPIRENSPVGTVIALISVSDRDTGVNGQVTCSLTSHVPFKLVST 350 360 370 380 390 400 430 440 450 460 470 480 fj1508 FKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEY ::::::::::::::::... :..::::::::::::::::::::::::::::::.:::::: gi|741 FKNYYSLVLDSALDRETTADYKVVVTARDGGSPSLWATASVSVEVADVNDNAPVFAQPEY 410 420 430 440 450 460 490 500 510 520 530 540 fj1508 TVFVKENNPPGCHIFTVSAWDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYAL ::::::::::: ::::::: :::::::::::::::::::::: ::::::::::::::.:: gi|741 TVFVKENNPPGAHIFTVSAMDADAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFAL 470 480 490 500 510 520 550 560 570 580 590 600 fj1508 QPLDHEELELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPALLAPRAGGTGGAVSEL :::::::::::.:::.::::::: :::::::::::::::::::.:: :.:: .:: ::.: gi|741 QPLDHEELELLRFQVSARDAGVPALGSNVTLQVFVLDENDNAPTLLEPEAGVSGGIVSRL 530 540 550 560 570 580 610 620 630 640 650 660 fj1508 VPWSVGVGHVVAKVRAVDADSGYNAWLSYELQPGTGGARIPFRVGLYTGEISTTRALDET : :::.::::::::::::::::::::::::: . :..: :::::::::::::: :::. gi|741 VSRSVGAGHVVAKVRAVDADSGYNAWLSYELQSSEGNSRSLFRVGLYTGEISTTRILDEA 590 600 610 620 630 640 670 680 690 700 710 720 fj1508 DAPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRALVGAVGPDAALVDVNVYL :.::.::::::::::.::. .::::::::::.: .::: ::. .... .:.:::::::: gi|741 DSPRQRLLVLVKDHGDPAMIVTATVLVSLVENGPVPKAPSRVSTSVTHSEASLVDVNVYL 650 660 670 680 690 700 730 740 750 760 770 780 fj1508 IIAICAVSSLLVLTLLLYTALRCSALPTEGACAPGKPTLVCSSAVGSWSYSQQRRPRVCS ::::::::::::::::::::::::..:.:..:.: ::..:::::::::::::::: :::: gi|741 IIAICAVSSLLVLTLLLYTALRCSTVPSESVCGPPKPVMVCSSAVGSWSYSQQRRQRVCS 710 720 730 740 750 760 790 800 810 820 830 840 fj1508 GEGPPKTDLMAFSPSLPDSRDREDQLQTTEESFAKPRQPNPDWRYSASLRAGMHSSVHLE :: ::::::::::::: ::::::::::..:.: .:::::::::::::::::::::::::: gi|741 GEYPPKTDLMAFSPSLSDSRDREDQLQSAEDSSGKPRQPNPDWRYSASLRAGMHSSVHLE 770 780 790 800 810 820 850 860 870 880 890 900 fj1508 EAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 EAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGE 830 840 850 860 870 880 910 920 fj1508 KKQTQVSFLLRRKGEASQPRQ gi|741 LPDKFIIPGSPAIISIRQEPANNQIDKSDFITFGKKEET 890 900 910 >>gi|81908469|sp|O88689.1|PCDA4_MOUSE Protocadherin alph (947 aa) initn: 4970 init1: 4970 opt: 4970 Z-score: 5549.1 bits: 1038.1 E(): 0 Smith-Waterman score: 4970; 85.535% identity (94.875% similar) in 878 aa overlap (21-898:1-878) 10 20 30 40 50 60 fj1508 KISLDFEKRYLIRTKYCALKMEFSWGSGQESRRLLLLLLLLAAWEAGNGQLHYSVSEEAK :::::::::::.:::: .:::: :::::.:.:::. :::: gi|819 MEFSWGSGQESQRLLLSFLLLAIWEAGNSQIHYSIPEEAK 10 20 30 40 70 80 90 100 110 120 fj1508 HGTFVGRIAQDLGLELAELVPRLFRVASKGRGGLLEVNLQNGILFVNSRIDREELCRRSA ::::::::::::::::.:::::::::::: :: ::::::::::::::::::::::: ::: gi|819 HGTFVGRIAQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSA 50 60 70 80 90 100 130 140 150 160 170 180 fj1508 ECSIHLEVIVDRPLQVFHVDVEVRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDA :::::::::::::::::::.::::::::::: ::.::::: ::::::::. ::::::::: gi|819 ECSIHLEVIVDRPLQVFHVEVEVRDINDNPPRFPTTQKNLFIAESRPLDTWFPLEGASDA 110 120 130 140 150 160 190 200 210 220 230 240 fj1508 DIGENALLTYRLSPNEYFSLEKPPDDELVKGLGLILRKSLDREEAPEIFLVLTATDGGKP ::: ::.::::::::.::::::: .:: ::::::.:::::::::.:::.::::.:::::: gi|819 DIGINAVLTYRLSPNDYFSLEKPSNDERVKGLGLVLRKSLDREETPEIILVLTVTDGGKP 170 180 190 200 210 220 250 260 270 280 290 300 fj1508 ELTGTVQLLITVLDANDNAPAFDRTIYKVRLLENVPNGTLVIKLNASDLDEGLNGDIVYS ::::.:::::::::::::::.:::..: :.: :::::::::.:.::::::::.::::.:: gi|819 ELTGSVQLLITVLDANDNAPVFDRSLYTVKLPENVPNGTLVVKVNASDLDEGVNGDIMYS 230 240 250 260 270 280 310 320 330 340 350 360 fj1508 FSNDISPNVKSKFHIDPITGQIIVKGYIDFEESKSYEIIVEGIDKGQLPLSGHCRVIVEV ::.::::::: ::::::..:.::::::::::: :::::..::::::::::::::.:::.: gi|819 FSTDISPNVKYKFHIDPVSGEIIVKGYIDFEECKSYEILIEGIDKGQLPLSGHCKVIVQV 290 300 310 320 330 340 370 380 390 400 410 420 fj1508 EDNNDNVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVNGLVTCSLTSHVPFKLVST :: :::::.::::::::::::..:.:::::::::::.: :::: :::::::::::::::: gi|819 EDINDNVPELEFKSLSLPIRENSPVGTVIALISVSDRDTGVNGQVTCSLTSHVPFKLVST 350 360 370 380 390 400 430 440 450 460 470 480 fj1508 FKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEY ::::::::::::::::... :..::::::::::::::::::::::::::::::.:::::: gi|819 FKNYYSLVLDSALDRETTADYKVVVTARDGGSPSLWATASVSVEVADVNDNAPVFAQPEY 410 420 430 440 450 460 490 500 510 520 530 540 fj1508 TVFVKENNPPGCHIFTVSAWDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYAL ::::::::::: ::::::: :::::::::::::::::::::: ::::::::::::::.:: gi|819 TVFVKENNPPGAHIFTVSAMDADAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFAL 470 480 490 500 510 520 550 560 570 580 590 600 fj1508 QPLDHEELELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPALLAPRAGGTGGAVSEL :::::::::::.:::.::::::: :::::::::::::::::::.:: :.:: .:: ::.: gi|819 QPLDHEELELLRFQVSARDAGVPALGSNVTLQVFVLDENDNAPTLLEPEAGVSGGIVSRL 530 540 550 560 570 580 610 620 630 640 650 660 fj1508 VPWSVGVGHVVAKVRAVDADSGYNAWLSYELQPGTGGARIPFRVGLYTGEISTTRALDET : :::.::::::::::::::::::::::::: . :..: :::::::::::::: :::. gi|819 VSRSVGAGHVVAKVRAVDADSGYNAWLSYELQSSEGNSRSLFRVGLYTGEISTTRILDEA 590 600 610 620 630 640 670 680 690 700 710 720 fj1508 DAPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRALVGAVGPDAALVDVNVYL :.::.::::::::::.::. .::::::::::.: .::: ::. .... .:.:::::::: gi|819 DSPRQRLLVLVKDHGDPAMIVTATVLVSLVENGPVPKAPSRVSTSVTHSEASLVDVNVYL 650 660 670 680 690 700 730 740 750 760 770 780 fj1508 IIAICAVSSLLVLTLLLYTALRCSALPTEGACAPGKPTLVCSSAVGSWSYSQQRRPRVCS ::::::::::::::::::::::::..:.:..:.: ::..:::::::::::::::: :::: gi|819 IIAICAVSSLLVLTLLLYTALRCSTVPSESVCGPPKPVMVCSSAVGSWSYSQQRRQRVCS 710 720 730 740 750 760 790 800 810 820 830 840 fj1508 GEGPPKTDLMAFSPSLPDSRDREDQLQTTEESFAKPRQPNPDWRYSASLRAGMHSSVHLE :: ::::::::::::: ::::::::::..:.: .:::::::::::::::::::::::::: gi|819 GEYPPKTDLMAFSPSLSDSRDREDQLQSAEDSSGKPRQPNPDWRYSASLRAGMHSSVHLE 770 780 790 800 810 820 850 860 870 880 890 900 fj1508 EAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 EAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGE 830 840 850 860 870 880 910 920 fj1508 KKQTQVSFLLRRKGEASQPRQ gi|819 LPDKFIIPGSPAIISIRQEPANNQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNS 890 900 910 920 930 940 >>gi|109078951|ref|XP_001088407.1| PREDICTED: similar to (798 aa) initn: 4939 init1: 4939 opt: 4939 Z-score: 5515.5 bits: 1031.6 E(): 0 Smith-Waterman score: 4939; 95.975% identity (98.113% similar) in 795 aa overlap (21-815:1-795) 10 20 30 40 50 60 fj1508 KISLDFEKRYLIRTKYCALKMEFSWGSGQESRRLLLLLLLLAAWEAGNGQLHYSVSEEAK ::::::::::::::::::::::.::::::::::::::::: gi|109 MEFSWGSGQESRRLLLLLLLLATWEAGNGQLHYSVSEEAK 10 20 30 40 70 80 90 100 110 120 fj1508 HGTFVGRIAQDLGLELAELVPRLFRVASKGRGGLLEVNLQNGILFVNSRIDREELCRRSA :::::::::::::::::::::::::::::.:: ::::::::::::::::::::::: .. gi|109 HGTFVGRIAQDLGLELAELVPRLFRVASKSRGDLLEVNLQNGILFVNSRIDREELCGWNS 50 60 70 80 90 100 130 140 150 160 170 180 fj1508 ECSIHLEVIVDRPLQVFHVDVEVRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDA ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ECSIHLEVIVDGPLQVFHVDVEVRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDA 110 120 130 140 150 160 190 200 210 220 230 240 fj1508 DIGENALLTYRLSPNEYFSLEKPPDDELVKGLGLILRKSLDREEAPEIFLVLTATDGGKP ::::::::::::::::::::::: :::::::::::: ::::::::::::::::::::::: gi|109 DIGENALLTYRLSPNEYFSLEKPSDDELVKGLGLILWKSLDREEAPEIFLVLTATDGGKP 170 180 190 200 210 220 250 260 270 280 290 300 fj1508 ELTGTVQLLITVLDANDNAPAFDRTIYKVRLLENVPNGTLVIKLNASDLDEGLNGDIVYS :::::.:::::::::::::::::::.::::: :::::::::::::::::::::::::::: gi|109 ELTGTIQLLITVLDANDNAPAFDRTLYKVRLPENVPNGTLVIKLNASDLDEGLNGDIVYS 230 240 250 260 270 280 310 320 330 340 350 360 fj1508 FSNDISPNVKSKFHIDPITGQIIVKGYIDFEESKSYEIIVEGIDKGQLPLSGHCRVIVEV ::::.::::::::::::::::::::::::::::::::::::::: ::::::::::::::: gi|109 FSNDVSPNVKSKFHIDPITGQIIVKGYIDFEESKSYEIIVEGIDMGQLPLSGHCRVIVEV 290 300 310 320 330 340 370 380 390 400 410 420 fj1508 EDNNDNVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVNGLVTCSLTSHVPFKLVST :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EDNNDHVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVNGLVTCSLTSHVPFKLVST 350 360 370 380 390 400 430 440 450 460 470 480 fj1508 FKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEY 410 420 430 440 450 460 490 500 510 520 530 540 fj1508 TVFVKENNPPGCHIFTVSAWDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYAL ::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: gi|109 TVFVKENNPPGCHIFTVSARDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYAL 470 480 490 500 510 520 550 560 570 580 590 600 fj1508 QPLDHEELELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPALLAPRAGGTGGAVSEL :::::::::::::::.::::::: :::::::::::::::::::::::::::: ::.:.:: gi|109 QPLDHEELELLQFQVSARDAGVPSLGSNVTLQVFVLDENDNAPALLAPRAGGIGGSVNEL 530 540 550 560 570 580 610 620 630 640 650 660 fj1508 VPWSVGVGHVVAKVRAVDADSGYNAWLSYELQPGTGGARIPFRVGLYTGEISTTRALDET ::::::.:::::::::::::::::::::::::::::: :::::::::::::::::.:::. gi|109 VPWSVGAGHVVAKVRAVDADSGYNAWLSYELQPGTGGMRIPFRVGLYTGEISTTRVLDEA 590 600 610 620 630 640 670 680 690 700 710 720 fj1508 DAPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRALVGAVGPDAALVDVNVYL :::::::::::::::.:::::::::::::::::: :::::::: :::::..::::::::: gi|109 DAPRHRLLVLVKDHGKPALTATATVLVSLVESGQEPKASSRALSGAVGPEVALVDVNVYL 650 660 670 680 690 700 730 740 750 760 770 780 fj1508 IIAICAVSSLLVLTLLLYTALRCSALPTEGACAPGKPTLVCSSAVGSWSYSQQRRPRVCS ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: gi|109 IIAICAVSSLLVLTLLLYTALRCSAPPTEGACAPGKPTLVCSSAVGSWSYSQQRRPRVCS 710 720 730 740 750 760 790 800 810 820 830 840 fj1508 GEGPPKTDLMAFSPSLPDSRDREDQLQTTEESFAKPRQPNPDWRYSASLRAGMHSSVHLE ::::::::::::::::::::::::::::::::::: gi|109 GEGPPKTDLMAFSPSLPDSRDREDQLQTTEESFAKVSV 770 780 790 850 860 870 880 890 900 fj1508 EAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPEP >>gi|81911821|sp|Q767I8.1|PCDA4_RAT Protocadherin alpha- (947 aa) initn: 4902 init1: 4902 opt: 4902 Z-score: 5473.1 bits: 1024.0 E(): 0 Smith-Waterman score: 4902; 84.396% identity (93.964% similar) in 878 aa overlap (21-898:1-878) 10 20 30 40 50 60 fj1508 KISLDFEKRYLIRTKYCALKMEFSWGSGQESRRLLLLLLLLAAWEAGNGQLHYSVSEEAK :::::::::::.:::: .:.:: :: ::.:::::. :::: gi|819 MEFSWGSGQESQRLLLSFLFLAIWEPGNSQLHYSIPEEAK 10 20 30 40 70 80 90 100 110 120 fj1508 HGTFVGRIAQDLGLELAELVPRLFRVASKGRGGLLEVNLQNGILFVNSRIDREELCRRSA ::::::::::::::::::::::::::::: :: ::::::::::::::::::::::: ::: gi|819 HGTFVGRIAQDLGLELAELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSA 50 60 70 80 90 100 130 140 150 160 170 180 fj1508 ECSIHLEVIVDRPLQVFHVDVEVRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDA :::::::::::::::::::.:::::::::::.::.::::: ::::::::. ::::::::. gi|819 ECSIHLEVIVDRPLQVFHVEVEVRDINDNPPTFPTTQKNLFIAESRPLDTWFPLEGASDS 110 120 130 140 150 160 190 200 210 220 230 240 fj1508 DIGENALLTYRLSPNEYFSLEKPPDDELVKGLGLILRKSLDREEAPEIFLVLTATDGGKP ::: ::.::::::::.::::::: ..: ::::::::::::::::.::.:::::.:::::: gi|819 DIGINAVLTYRLSPNDYFSLEKPTNSERVKGLGLILRKSLDREETPELFLVLTVTDGGKP 170 180 190 200 210 220 250 260 270 280 290 300 fj1508 ELTGTVQLLITVLDANDNAPAFDRTIYKVRLLENVPNGTLVIKLNASDLDEGLNGDIVYS ::::.:::::::::::::.:.:::..: :.: :::::::::.:.:::::::: ::...:: gi|819 ELTGSVQLLITVLDANDNSPVFDRSLYTVKLPENVPNGTLVVKVNASDLDEGANGEVMYS 230 240 250 260 270 280 310 320 330 340 350 360 fj1508 FSNDISPNVKSKFHIDPITGQIIVKGYIDFEESKSYEIIVEGIDKGQLPLSGHCRVIVEV ::.:::::::.::::::.::.: ::::::::: ::::..::::::::::::::.:::.: gi|819 FSTDISPNVKNKFHIDPVTGEIAVKGYIDFEECTSYEILIEGIDKGQLPLSGHCKVIVQV 290 300 310 320 330 340 370 380 390 400 410 420 fj1508 EDNNDNVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVNGLVTCSLTSHVPFKLVST :: :::.:.::::::::::::.::.::::::::: : : :::: :::::: .:::::::: gi|819 EDINDNAPELEFKSLSLPIRENAPVGTVIALISVFDPDTGVNGQVTCSLTPQVPFKLVST 350 360 370 380 390 400 430 440 450 460 470 480 fj1508 FKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEY ::::::::::::::::... :..:: ::::: :::::::::::::::::::::::::::: gi|819 FKNYYSLVLDSALDRETTADYKVVVIARDGGLPSLWATASVSVEVADVNDNAPAFAQPEY 410 420 430 440 450 460 490 500 510 520 530 540 fj1508 TVFVKENNPPGCHIFTVSAWDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYAL ::::::::::: ::::::: :::.:::::::::::::::::: ::::::::::::::.:: gi|819 TVFVKENNPPGAHIFTVSAVDADSQENALVSYSLVERRVGERLLSSYVSVHAESGKVFAL 470 480 490 500 510 520 550 560 570 580 590 600 fj1508 QPLDHEELELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPALLAPRAGGTGGAVSEL :::::::::::::::.::::::: :::::::::::::::::::.:: :.:: .:: ::.: gi|819 QPLDHEELELLQFQVSARDAGVPALGSNVTLQVFVLDENDNAPTLLEPEAGISGGIVSRL 530 540 550 560 570 580 610 620 630 640 650 660 fj1508 VPWSVGVGHVVAKVRAVDADSGYNAWLSYELQPGTGGARIPFRVGLYTGEISTTRALDET : :::.::::::::::::::::::::::::: . :..: ::::::::::::::.:::. gi|819 VSRSVGAGHVVAKVRAVDADSGYNAWLSYELQSSEGNSRSLFRVGLYTGEISTTRSLDEA 590 600 610 620 630 640 670 680 690 700 710 720 fj1508 DAPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRALVGAVGPDAALVDVNVYL :.::.::::::::::.::. .::::::::::.: ::: ::. . ... .:.:::::::: gi|819 DSPRQRLLVLVKDHGDPAMMVTATVLVSLVENGPLPKAPSRVSTRVTNAEASLVDVNVYL 650 660 670 680 690 700 730 740 750 760 770 780 fj1508 IIAICAVSSLLVLTLLLYTALRCSALPTEGACAPGKPTLVCSSAVGSWSYSQQRRPRVCS ::::::::::::::::::.:::::..:.:..:.: ::..:::::::::::::::: :::: gi|819 IIAICAVSSLLVLTLLLYSALRCSTVPSESVCGPPKPVMVCSSAVGSWSYSQQRRQRVCS 710 720 730 740 750 760 790 800 810 820 830 840 fj1508 GEGPPKTDLMAFSPSLPDSRDREDQLQTTEESFAKPRQPNPDWRYSASLRAGMHSSVHLE :: ::::::::::::: ::::::::::.::.: .:::::::::::::::::::::::::: gi|819 GEYPPKTDLMAFSPSLSDSRDREDQLQSTEDSSGKPRQPNPDWRYSASLRAGMHSSVHLE 770 780 790 800 810 820 850 860 870 880 890 900 fj1508 EAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPEP ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|819 EAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQPGPGE 830 840 850 860 870 880 910 920 fj1508 KKQTQVSFLLRRKGEASQPRQ gi|819 LPDKFIIPGSPAIISIRQESANNQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNS 890 900 910 920 930 940 921 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Sun Aug 10 15:50:39 2008 done: Sun Aug 10 15:52:42 2008 Total Scan time: 1053.020 Total Display time: 0.500 Function used was FASTA [version 34.26.5 April 26, 2007]