hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-16045756/chunk_1/iprscan-20080810-16045756.nocrc
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Query sequence: fj15240
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00069.15.ls Protein kinase domain                       246.6    4.8e-71   1
PF00069.15.fs Protein kinase domain                       244.7    1.8e-70   1
PF07714.7.fs Protein tyrosine kinase                     129.6    1.6e-37   2
PF07714.7.ls Protein tyrosine kinase                     128.2    2.2e-35   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF00069.15.fs   1/1      78   352 ..     1   287 []   244.7  1.8e-70
PF07714.7.fs   1/2      78   297 ..     1   227 [.   119.8  1.2e-34
PF00069.15.ls   1/1      78   352 ..     1   287 []   246.6  4.8e-71
PF07714.7.ls   1/1      78   352 ..     1   272 []   128.2  2.2e-35

Alignments of top-scoring domains:
PF00069.15.fs: domain 1 of 1, from 78 to 352: score 244.7, E = 1.8e-70
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                      yel e++GsG+ ++V  a+     ++VA+K+i+++k   ++d+ +  
     fj15240    78    YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK- 123  

                   lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdyls.
                     Eiq +  ++HpNIv ++ +f  kd+l+lV+ ++ gG    +  d++++
     fj15240   124 --EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG----SVLDIIKh 167  

                   .e...trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILl
                    + ++ +++g+l  +e ++  i++++l+gleYLH+ng iHRD+K  NILl
     fj15240   168 iVakgEHKSGVL--DESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL 215  

                   dnngvvdaflKiaDFGlAkkls....t.sss.lttfvGTpwYmAPEvllg
                    ++g v     iaDFG++++l ++++++++   +tfvGTp +mAPEv   
     fj15240   216 GEDGSV----QIADFGVSAFLAtggdItRNKvRKTFVGTPCWMAPEVMEQ 261  

                   gngygtkvDvWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpple
                    +gy+ k+D+WS+G++ +el+tG  P+         +++++ ++l+ +  
     fj15240   262 VRGYDFKADIWSFGITAIELATGAAPYHKY-----PPMKVLMLTLQND-- 304  

                   fdspewdsisrse.fr.r.l.pnlseeakdLikkcLnkDPskRltaeeil
                          ++s+++++++++  ++  +++++ i+ cL+kDP+kR+ta+e+l
     fj15240   305 -------PPSLETgVQdKeMlKKYGKSFRKMISLCLQKDPEKRPTAAELL 347  

                   qHPwf<-*
                    H++f   
     fj15240   348 RHKFF    352  

PF07714.7.fs: domain 1 of 2, from 78 to 297: score 119.8, E = 1.2e-34
                   *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.keigaseeei
                       +l++++G+Ga  +V  +++      ++ kVA+K ++ e ++  +  
     fj15240    78    YELQEVIGSGATAVVQAAYCA----PKKEKVAIKRInLE-KCQTS-- 117  

                   eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd
                    ++++l+E++ M++  +HpNiV+++   +  ++     l++V+ +  gG+
     fj15240   118 -MDELLKEIQAMSQC-HHPNIVSYYTSFVV-KDE----LWLVMKLLSGGS 160  

                   LldfLrkhr.....egrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAA
                    ld  ++   ++++  + L+ +++  + +++ +G+eYL+ ++ +HRD+ A
     fj15240   161 VLDIIKHIVakgehKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKA 210  

                   RNcLVsenlvVKIsDFGLaRdi.ynddyY.vrkkgggklPvkWmAPEslk
                    N+L++e++ V I+DFG +  + +  d  + ++++       WmAPE++ 
     fj15240   211 GNILLGEDGSVQIADFGVSAFLaTGGDITrNKVRKTFVGTPCWMAPEVME 260  

                   ygk.FtskSDVWSFGVlLWEiftlGeqPFYpgmsneevl<-*
                     +++  k D+WSFG++  E+ t G+ P Y   ++  vl   
     fj15240   261 QVRgYDFKADIWSFGITAIELAT-GAAP-YHKYPPMKVL    297  

PF00069.15.ls: domain 1 of 1, from 78 to 352: score 246.6, E = 4.8e-71
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                      yel e++GsG+ ++V  a+     ++VA+K+i+++k   ++d+ +  
     fj15240    78    YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK- 123  

                   lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdyls.
                     Eiq +  ++HpNIv ++ +f  kd+l+lV+ ++ gG    +  d++++
     fj15240   124 --EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG----SVLDIIKh 167  

                   .e...trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILl
                    + ++ +++g+l  +e ++  i++++l+gleYLH+ng iHRD+K  NILl
     fj15240   168 iVakgEHKSGVL--DESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL 215  

                   dnngvvdaflKiaDFGlAkkls....t.sss.lttfvGTpwYmAPEvllg
                    ++g v     iaDFG++++l ++++++++   +tfvGTp +mAPEv   
     fj15240   216 GEDGSV----QIADFGVSAFLAtggdItRNKvRKTFVGTPCWMAPEVMEQ 261  

                   gngygtkvDvWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpple
                    +gy+ k+D+WS+G++ +el+tG  P+         +++++ ++l+ +  
     fj15240   262 VRGYDFKADIWSFGITAIELATGAAPYHKY-----PPMKVLMLTLQND-- 304  

                   fdspewdsisrse.fr.r.l.pnlseeakdLikkcLnkDPskRltaeeil
                          ++s+++++++++  ++  +++++ i+ cL+kDP+kR+ta+e+l
     fj15240   305 -------PPSLETgVQdKeMlKKYGKSFRKMISLCLQKDPEKRPTAAELL 347  

                   qHPwf<-*
                    H++f   
     fj15240   348 RHKFF    352  

PF07714.7.ls: domain 1 of 1, from 78 to 352: score 128.2, E = 2.2e-35
                   *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.keigaseeei
                       +l++++G+Ga  +V  +++      ++ kVA+K ++ e ++  +  
     fj15240    78    YELQEVIGSGATAVVQAAYCA----PKKEKVAIKRInLE-KCQTS-- 117  

                   eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd
                    ++++l+E++ M++  +HpNiV+++   +  ++     l++V+ +  gG+
     fj15240   118 -MDELLKEIQAMSQC-HHPNIVSYYTSFVV-KDE----LWLVMKLLSGGS 160  

                   LldfLrkhr.....egrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAA
                    ld  ++   ++++  + L+ +++  + +++ +G+eYL+ ++ +HRD+ A
     fj15240   161 VLDIIKHIVakgehKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKA 210  

                   RNcLVsenlvVKIsDFGLaRdi.ynddyY.vrkkgggklPvkWmAPEslk
                    N+L++e++ V I+DFG +  + +  d  + ++++       WmAPE++ 
     fj15240   211 GNILLGEDGSVQIADFGVSAFLaTGGDITrNKVRKTFVGTPCWMAPEVME 260  

                   ygk.FtskSDVWSFGVlLWEiftlGeqPFYpgmsnee............v
                     +++  k D+WSFG++  E+ t G+ P Y   ++      + +++++++
     fj15240   261 QVRgYDFKADIWSFGITAIELAT-GAAP-YHKYPPMKvlmltlqndppsL 308  

                   lellyedGyRLprPenCPdelYdlMlqCWaedPedRPtFsel..veeL<-
                      + +d + L++     +   +++ +C ++dPe+RPt +el ++ ++  
     fj15240   309 ETGV-QDKEMLKKY---GKSFRKMISLCLQKDPEKRPTAAELlrHKFF   352  

                   *
                    
     fj15240     -   -    

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