hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-17183839/chunk_1/iprscan-20080810-17183839.nocrc
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Query sequence: fj15863
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00454                                                  56.0    4.8e-12   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00454    1/1     644   709 ..     1    67 []    56.0  4.8e-12

Alignments of top-scoring domains:
SM00454: domain 1 of 1, from 644 to 709: score 56.0, E = 4.8e-12
                   *->vs.wspesVaeWLesigleqYadnFrkngidgeelllltseedLkel
                      v++  + +++e Le++ l++Y ++F+k++id+e ll +t  +dLke+
     fj15863   644    VEnEEVLTLQETLEALSLSEYFSTFEKEKIDMESLLMCT-VDDLKEM 689  

                   GitllGhRkkIlsaiqklkeq<-*
                   Gi +lG+RkkI++ ++   +    
     fj15863   690 GI-PLGPRKKIANFVEHKAAK    709  

//