hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-17255871/chunk_1/iprscan-20080810-17255871.nocrc
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Query sequence: fj15904
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00241.10.fs Cofilin/tropomyosin-type actin-binding pr    57.3    8.3e-16   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF00241.10.fs   1/1      22    77 ..     1    63 [.    57.3  8.3e-16

Alignments of top-scoring domains:
PF00241.10.fs: domain 1 of 1, from 22 to 77: score 57.3, E = 8.3e-16
                   *->delktsfnelkkrkkkkhryiifkIdknkteIvveevGkkastgasy
                      ++l+++++++++rk++++++ii+kIdk+k+ +v++e+     +g+s+
     fj15904    22    EDLVEKLRKFRFRKETNNAAIIMKIDKDKRLVVLDEE----LEGISP 64   

                   deFveelpqlderecr<-*
                   de+++elp   er++r   
     fj15904    65 DELKDELP---ERQPR    77   

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