# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofj16937.fasta.nr -Q fj16937.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fj16937, 311 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6834167 sequences Expectation_n fit: rho(ln(x))= 5.3885+/-0.000191; mu= 8.9334+/- 0.011 mean_var=85.0431+/-16.005, 0's: 41 Z-trim: 75 B-trim: 7 in 2/63 Lambda= 0.139077 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62088066|dbj|BAD92480.1| tripartite motif-conta ( 311) 2208 452.4 4.3e-125 gi|119574090|gb|EAW53705.1| tripartite motif-conta ( 353) 1924 395.5 6.7e-108 gi|119574088|gb|EAW53703.1| tripartite motif-conta ( 272) 1918 394.2 1.3e-107 gi|47606198|sp|Q96A61|TRI52_HUMAN Tripartite motif ( 297) 1918 394.2 1.3e-107 gi|114604985|ref|XP_001158522.1| PREDICTED: simila ( 271) 1797 369.9 2.6e-100 gi|114604983|ref|XP_001158458.1| PREDICTED: simila ( 349) 1798 370.2 2.7e-100 gi|114603980|ref|XP_001158289.1| PREDICTED: simila ( 271) 1787 367.9 1e-99 gi|114603976|ref|XP_001158131.1| PREDICTED: simila ( 283) 1782 366.9 2.1e-99 gi|114603978|ref|XP_001158187.1| PREDICTED: tripar ( 293) 1782 366.9 2.2e-99 gi|111306972|gb|AAI19924.1| Tripartite motif-conta ( 288) 1464 303.1 3.5e-80 gi|114604435|ref|XP_001166788.1| PREDICTED: simila ( 186) 1251 260.2 1.8e-67 gi|126309389|ref|XP_001372311.1| PREDICTED: simila ( 627) 1249 260.3 6e-67 gi|73970297|ref|XP_548790.2| PREDICTED: similar to ( 629) 1222 254.8 2.6e-65 gi|62656005|ref|XP_220357.3| PREDICTED: similar to ( 628) 1214 253.2 7.9e-65 gi|76622765|ref|XP_870480.1| PREDICTED: similar to ( 629) 1213 253.0 9e-65 gi|56800242|emb|CAI35108.1| tripartite motif-conta ( 630) 1213 253.0 9e-65 gi|109080183|ref|XP_001104049.1| PREDICTED: simila ( 517) 1209 252.2 1.4e-64 gi|109080185|ref|XP_001104219.1| PREDICTED: simila ( 544) 1209 252.2 1.4e-64 gi|194219468|ref|XP_001495283.2| PREDICTED: simila ( 514) 1196 249.5 8.3e-64 gi|149726010|ref|XP_001495265.1| PREDICTED: simila ( 631) 1196 249.6 9.6e-64 gi|119574096|gb|EAW53711.1| tripartite motif-conta ( 311) 1184 247.0 3e-63 gi|119574099|gb|EAW53714.1| tripartite motif-conta ( 381) 1184 247.0 3.5e-63 gi|119574098|gb|EAW53713.1| tripartite motif-conta ( 494) 1184 247.1 4.3e-63 gi|41016419|dbj|BAD07473.1| hypothetical protein [ ( 518) 1184 247.1 4.4e-63 gi|119574097|gb|EAW53712.1| tripartite motif-conta ( 518) 1184 247.1 4.4e-63 gi|119574092|gb|EAW53707.1| tripartite motif-conta ( 349) 1181 246.4 5e-63 gi|116242826|sp|Q8WV44|TRI41_HUMAN Tripartite moti ( 630) 1184 247.2 5.1e-63 gi|41016417|dbj|BAD07472.1| hypothetical protein [ ( 630) 1184 247.2 5.1e-63 gi|114603953|ref|XP_001156953.1| PREDICTED: hypoth ( 395) 1176 245.4 1.1e-62 gi|114603951|ref|XP_001157049.1| PREDICTED: hypoth ( 517) 1176 245.5 1.3e-62 gi|114603949|ref|XP_001157098.1| PREDICTED: hypoth ( 629) 1176 245.6 1.6e-62 gi|73970311|ref|XP_548791.2| PREDICTED: similar to (1147) 1141 238.8 3.2e-60 gi|13436338|gb|AAH04956.1|AAH04956 Unknown (protei ( 361) 1083 226.7 4.2e-57 gi|18676452|dbj|BAB84878.1| FLJ00123 protein [Homo ( 255) 883 186.5 3.9e-45 gi|16416394|dbj|BAB70617.1| hypothetical protein [ ( 439) 811 172.2 1.3e-40 gi|48257198|gb|AAH18765.2| TRIM41 protein [Homo sa ( 552) 811 172.3 1.6e-40 gi|123983410|gb|ABM83446.1| tripartite motif-conta ( 545) 783 166.7 7.6e-39 gi|52545735|emb|CAH56279.1| hypothetical protein [ ( 403) 665 142.9 8.1e-32 gi|56800244|emb|CAI35110.1| tripartite motif-conta ( 156) 632 136.0 3.9e-30 gi|119574095|gb|EAW53710.1| tripartite motif-conta ( 257) 621 133.9 2.6e-29 gi|169730360|gb|ACA64761.1| tripartite motif prote ( 627) 546 119.2 1.7e-24 gi|149604318|ref|XP_001520701.1| PREDICTED: simila ( 170) 533 116.1 4e-24 gi|119224649|gb|AAI27196.1| TRIM41 protein [Homo s ( 110) 438 96.9 1.6e-18 gi|56800243|emb|CAI35109.1| tripartite motif-conta ( 161) 401 89.6 3.6e-16 gi|149052381|gb|EDM04198.1| rCG34522 [Rattus norve ( 177) 401 89.7 3.9e-16 gi|149442891|ref|XP_001521069.1| PREDICTED: simila ( 139) 383 86.0 4e-15 gi|149050164|gb|EDM02488.1| rCG36979 [Rattus norve ( 235) 370 83.5 3.6e-14 gi|26325476|dbj|BAC26492.1| unnamed protein produc ( 233) 357 80.9 2.2e-13 gi|148668196|gb|EDL00526.1| mCG1042451 [Mus muscul ( 273) 357 81.0 2.4e-13 gi|109080181|ref|XP_001103961.1| PREDICTED: tripar ( 502) 337 77.2 6.2e-12 >>gi|62088066|dbj|BAD92480.1| tripartite motif-containin (311 aa) initn: 2208 init1: 2208 opt: 2208 Z-score: 2401.1 bits: 452.4 E(): 4.3e-125 Smith-Waterman score: 2208; 100.000% identity (100.000% similar) in 311 aa overlap (1-311:1-311) 10 20 30 40 50 60 fj1693 FGGRPAGASPLLSSKLTYLHLPAGIKMAGYATTPSPMQTLQEEAVCAICLDYFKDPVSIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 FGGRPAGASPLLSSKLTYLHLPAGIKMAGYATTPSPMQTLQEEAVCAICLDYFKDPVSIS 10 20 30 40 50 60 70 80 90 100 110 120 fj1693 CGHNFCRGCVTQLWSKEDEEDQNEEEDEWEEEEDEEAVGAMDGWDGSIREVLYRGNADEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 CGHNFCRGCVTQLWSKEDEEDQNEEEDEWEEEEDEEAVGAMDGWDGSIREVLYRGNADEE 70 80 90 100 110 120 130 140 150 160 170 180 fj1693 LFQDQDDDELWLGDSGITNWDNVDYMWDEEEEEEEDQDYYLGGLRPDLRIDVYREEEILE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LFQDQDDDELWLGDSGITNWDNVDYMWDEEEEEEEDQDYYLGGLRPDLRIDVYREEEILE 130 140 150 160 170 180 190 200 210 220 230 240 fj1693 AYDEDEDEELYPDIHPPPSLPLPGQFTCPQCRKSFTRRSFRPNLQLANMVQIIRQMCPTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AYDEDEDEELYPDIHPPPSLPLPGQFTCPQCRKSFTRRSFRPNLQLANMVQIIRQMCPTP 190 200 210 220 230 240 250 260 270 280 290 300 fj1693 YRGNRSNDQGMCFKHQEALKLFCEVDKEAICVVCRESRSHKQHSVLPLEEVVQEYQVREM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 YRGNRSNDQGMCFKHQEALKLFCEVDKEAICVVCRESRSHKQHSVLPLEEVVQEYQVREM 250 260 270 280 290 300 310 fj1693 RECGGMKGVER ::::::::::: gi|620 RECGGMKGVER 310 >>gi|119574090|gb|EAW53705.1| tripartite motif-containin (353 aa) initn: 1976 init1: 1052 opt: 1924 Z-score: 2092.4 bits: 395.5 E(): 6.7e-108 Smith-Waterman score: 1924; 99.267% identity (99.634% similar) in 273 aa overlap (27-298:1-273) 10 20 30 40 50 60 fj1693 FGGRPAGASPLLSSKLTYLHLPAGIKMAGYATTPSPMQTLQEEAVCAICLDYFKDPVSIS :::::::::::::::::::::::::::::::::: gi|119 MAGYATTPSPMQTLQEEAVCAICLDYFKDPVSIS 10 20 30 70 80 90 100 110 120 fj1693 CGHNFCRGCVTQLWSKEDEEDQNEEEDEWEEEEDEEAVGAMDGWDGSIREVLYRGNADEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 CGHNFCRGCVTQLWSKEDEEDQNEEEDEWEEEEDEEAVGAMDGWDGSIREVLYRGNADEE 40 50 60 70 80 90 130 140 150 160 170 fj1693 LFQDQDDDELWLGDSGITNWDNVDYMWDEEEEEEE-DQDYYLGGLRPDLRIDVYREEEIL ::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: gi|119 LFQDQDDDELWLGDSGITNWDNVDYMWDEEEEEEEEDQDYYLGGLRPDLRIDVYREEEIL 100 110 120 130 140 150 180 190 200 210 220 230 fj1693 EAYDEDEDEELYPDIHPPPSLPLPGQFTCPQCRKSFTRRSFRPNLQLANMVQIIRQMCPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EAYDEDEDEELYPDIHPPPSLPLPGQFTCPQCRKSFTRRSFRPNLQLANMVQIIRQMCPT 160 170 180 190 200 210 240 250 260 270 280 290 fj1693 PYRGNRSNDQGMCFKHQEALKLFCEVDKEAICVVCRESRSHKQHSVLPLEEVVQEYQVRE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|119 PYRGNRSNDQGMCFKHQEALKLFCEVDKEAICVVCRESRSHKQHSVLPLEEVVQEYQVQL 220 230 240 250 260 270 300 310 fj1693 MRECGGMKGVER gi|119 FTAVSQVRLFKLVPLLLWLYPGSHLQIGYTSEINSHCTMTLALSLPIHLSTLQLHLPFSF 280 290 300 310 320 330 >>gi|119574088|gb|EAW53703.1| tripartite motif-containin (272 aa) initn: 1046 init1: 1046 opt: 1918 Z-score: 2087.4 bits: 394.2 E(): 1.3e-107 Smith-Waterman score: 1918; 99.631% identity (99.631% similar) in 271 aa overlap (27-296:1-271) 10 20 30 40 50 60 fj1693 FGGRPAGASPLLSSKLTYLHLPAGIKMAGYATTPSPMQTLQEEAVCAICLDYFKDPVSIS :::::::::::::::::::::::::::::::::: gi|119 MAGYATTPSPMQTLQEEAVCAICLDYFKDPVSIS 10 20 30 70 80 90 100 110 120 fj1693 CGHNFCRGCVTQLWSKEDEEDQNEEEDEWEEEEDEEAVGAMDGWDGSIREVLYRGNADEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 CGHNFCRGCVTQLWSKEDEEDQNEEEDEWEEEEDEEAVGAMDGWDGSIREVLYRGNADEE 40 50 60 70 80 90 130 140 150 160 170 fj1693 LFQDQDDDELWLGDSGITNWDNVDYMWDEEEEEEE-DQDYYLGGLRPDLRIDVYREEEIL ::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: gi|119 LFQDQDDDELWLGDSGITNWDNVDYMWDEEEEEEEEDQDYYLGGLRPDLRIDVYREEEIL 100 110 120 130 140 150 180 190 200 210 220 230 fj1693 EAYDEDEDEELYPDIHPPPSLPLPGQFTCPQCRKSFTRRSFRPNLQLANMVQIIRQMCPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EAYDEDEDEELYPDIHPPPSLPLPGQFTCPQCRKSFTRRSFRPNLQLANMVQIIRQMCPT 160 170 180 190 200 210 240 250 260 270 280 290 fj1693 PYRGNRSNDQGMCFKHQEALKLFCEVDKEAICVVCRESRSHKQHSVLPLEEVVQEYQVRE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PYRGNRSNDQGMCFKHQEALKLFCEVDKEAICVVCRESRSHKQHSVLPLEEVVQEYQA 220 230 240 250 260 270 300 310 fj1693 MRECGGMKGVER >>gi|47606198|sp|Q96A61|TRI52_HUMAN Tripartite motif-con (297 aa) initn: 1046 init1: 1046 opt: 1918 Z-score: 2086.9 bits: 394.2 E(): 1.3e-107 Smith-Waterman score: 1918; 99.631% identity (99.631% similar) in 271 aa overlap (27-296:1-271) 10 20 30 40 50 60 fj1693 FGGRPAGASPLLSSKLTYLHLPAGIKMAGYATTPSPMQTLQEEAVCAICLDYFKDPVSIS :::::::::::::::::::::::::::::::::: gi|476 MAGYATTPSPMQTLQEEAVCAICLDYFKDPVSIS 10 20 30 70 80 90 100 110 120 fj1693 CGHNFCRGCVTQLWSKEDEEDQNEEEDEWEEEEDEEAVGAMDGWDGSIREVLYRGNADEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 CGHNFCRGCVTQLWSKEDEEDQNEEEDEWEEEEDEEAVGAMDGWDGSIREVLYRGNADEE 40 50 60 70 80 90 130 140 150 160 170 fj1693 LFQDQDDDELWLGDSGITNWDNVDYMWDEEEEEEE-DQDYYLGGLRPDLRIDVYREEEIL ::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: gi|476 LFQDQDDDELWLGDSGITNWDNVDYMWDEEEEEEEEDQDYYLGGLRPDLRIDVYREEEIL 100 110 120 130 140 150 180 190 200 210 220 230 fj1693 EAYDEDEDEELYPDIHPPPSLPLPGQFTCPQCRKSFTRRSFRPNLQLANMVQIIRQMCPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 EAYDEDEDEELYPDIHPPPSLPLPGQFTCPQCRKSFTRRSFRPNLQLANMVQIIRQMCPT 160 170 180 190 200 210 240 250 260 270 280 290 fj1693 PYRGNRSNDQGMCFKHQEALKLFCEVDKEAICVVCRESRSHKQHSVLPLEEVVQEYQVRE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 PYRGNRSNDQGMCFKHQEALKLFCEVDKEAICVVCRESRSHKQHSVLPLEEVVQEYQEIK 220 230 240 250 260 270 300 310 fj1693 MRECGGMKGVER gi|476 LETTLVGILQIEQESIHSKAYNQ 280 290 >>gi|114604985|ref|XP_001158522.1| PREDICTED: similar to (271 aa) initn: 1273 init1: 883 opt: 1797 Z-score: 1956.2 bits: 369.9 E(): 2.6e-100 Smith-Waterman score: 1797; 93.773% identity (96.337% similar) in 273 aa overlap (27-297:1-268) 10 20 30 40 50 60 fj1693 FGGRPAGASPLLSSKLTYLHLPAGIKMAGYATTPSPMQTLQEEAVCAICLDYFKDPVSIS ::::::::::.::::::::::.:::::::::::: gi|114 MAGYATTPSPVQTLQEEAVCALCLDYFKDPVSIS 10 20 30 70 80 90 100 110 fj1693 CGHNFCRGCVTQLWSKEDEEDQNEEEDEWEEEE-DEEAVGAMDGWDGSIREVLYRGNADE ::::::::::.:::.:::: ::::::::: :::::::.:::::::::: ::::::: gi|114 CGHNFCRGCVSQLWGKEDE-----EEDEWEEEEEDEEAVGAVDGWDGSIREVSYRGNADE 40 50 60 70 80 120 130 140 150 160 170 fj1693 ELFQDQDDDELWLGDSGITNWDNVDYMWDEEEEEEEDQDYYLGGLRPDLRIDVYREEE-I ::::::::::::::::: ::::::::.:::::::::::: :::::::::::::::::: : gi|114 ELFQDQDDDELWLGDSGRTNWDNVDYIWDEEEEEEEDQDCYLGGLRPDLRIDVYREEEEI 90 100 110 120 130 140 180 190 200 210 220 230 fj1693 LEAYDEDEDEELYPDIHPPPSLPLPGQFTCPQCRKSFTRRSFRPNLQLANMVQIIRQMCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LEAYDEDEDEELYPDIHPPPSLPLPGQFTCPQCRKSFTRRSFRPNLQLANMVQIIRQMCP 150 160 170 180 190 200 240 250 260 270 280 290 fj1693 TPYRGNRSNDQGMCFKHQEALKLFCEVDKEAICVVCRESRSHKQHSVLPLEEVVQEYQVR :::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|114 TPYRGNRSNDQGMCFKHQEALKLFCEVDKEAICVVCRQSRSHKQHSVLPLEEVVQEYQVL 210 220 230 240 250 260 300 310 fj1693 EMRECGGMKGVER gi|114 SC 270 >>gi|114604983|ref|XP_001158458.1| PREDICTED: similar to (349 aa) initn: 1472 init1: 884 opt: 1798 Z-score: 1955.8 bits: 370.2 E(): 2.7e-100 Smith-Waterman score: 1798; 93.431% identity (96.350% similar) in 274 aa overlap (27-298:1-269) 10 20 30 40 50 60 fj1693 FGGRPAGASPLLSSKLTYLHLPAGIKMAGYATTPSPMQTLQEEAVCAICLDYFKDPVSIS ::::::::::.::::::::::.:::::::::::: gi|114 MAGYATTPSPVQTLQEEAVCALCLDYFKDPVSIS 10 20 30 70 80 90 100 110 fj1693 CGHNFCRGCVTQLWSKEDEEDQNEEEDEWEEEE-DEEAVGAMDGWDGSIREVLYRGNADE ::::::::::.:::.::::: :::::::: :::::::.:::::::::: ::::::: gi|114 CGHNFCRGCVSQLWGKEDEE-----EDEWEEEEEDEEAVGAVDGWDGSIREVSYRGNADE 40 50 60 70 80 120 130 140 150 160 170 fj1693 ELFQDQDDDELWLGDSGITNWDNVDYMWDEEEEEEEDQDYYLGGLRPDLRIDVYREEE-I ::::::::::::::::: ::::::::.:::::::::::: :::::::::::::::::: : gi|114 ELFQDQDDDELWLGDSGRTNWDNVDYIWDEEEEEEEDQDCYLGGLRPDLRIDVYREEEEI 90 100 110 120 130 140 180 190 200 210 220 230 fj1693 LEAYDEDEDEELYPDIHPPPSLPLPGQFTCPQCRKSFTRRSFRPNLQLANMVQIIRQMCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LEAYDEDEDEELYPDIHPPPSLPLPGQFTCPQCRKSFTRRSFRPNLQLANMVQIIRQMCP 150 160 170 180 190 200 240 250 260 270 280 290 fj1693 TPYRGNRSNDQGMCFKHQEALKLFCEVDKEAICVVCRESRSHKQHSVLPLEEVVQEYQVR :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::. gi|114 TPYRGNRSNDQGMCFKHQEALKLFCEVDKEAICVVCRQSRSHKQHSVLPLEEVVQEYQVQ 210 220 230 240 250 260 300 310 fj1693 EMRECGGMKGVER gi|114 LFTAVSQVRLFKLVPLLLWLYPGSHLQIGYTSEINSHCTMTLALSLPIHLSTLQLHLPFS 270 280 290 300 310 320 >>gi|114603980|ref|XP_001158289.1| PREDICTED: similar to (271 aa) initn: 1258 init1: 862 opt: 1787 Z-score: 1945.4 bits: 367.9 E(): 1e-99 Smith-Waterman score: 1787; 94.139% identity (95.238% similar) in 273 aa overlap (27-297:1-268) 10 20 30 40 50 60 fj1693 FGGRPAGASPLLSSKLTYLHLPAGIKMAGYATTPSPMQTLQEEAVCAICLDYFKDPVSIS ::::::::::.::::::::::::::::::::::: gi|114 MAGYATTPSPVQTLQEEAVCAICLDYFKDPVSIS 10 20 30 70 80 90 100 110 fj1693 CGHNFCRGCVTQLWSKEDEEDQNEEEDEWEEEE-DEEAVGAMDGWDGSIREVLYRGNADE ::::::::::::::.:::: ::::::::: :::::::.:::::::::: ::::::: gi|114 CGHNFCRGCVTQLWGKEDE-----EEDEWEEEEEDEEAVGAVDGWDGSIREVSYRGNADE 40 50 60 70 80 120 130 140 150 160 170 fj1693 ELFQDQDDDELWLGDSGITNWDNVDYMWDEEEEEEEDQDYYLGGLRPDLRIDVYREEE-I ::::::::::::::::: ::::::::::::::::::::: :::::::::::::::::: gi|114 ELFQDQDDDELWLGDSGRTNWDNVDYMWDEEEEEEEDQDCYLGGLRPDLRIDVYREEEET 90 100 110 120 130 140 180 190 200 210 220 230 fj1693 LEAYDEDEDEELYPDIHPPPSLPLPGQFTCPQCRKSFTRRSFRPNLQLANMVQIIRQMCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LEAYDEDEDEELYPDIHPPPSLPLPGQFTCPQCRKSFTRRSFRPNLQLANMVQIIRQMCP 150 160 170 180 190 200 240 250 260 270 280 290 fj1693 TPYRGNRSNDQGMCFKHQEALKLFCEVDKEAICVVCRESRSHKQHSVLPLEEVVQEYQVR :::: ::::::: :::::::::::::::::::::::::::::::::::::::::::::: gi|114 TPYRENRSNDQGTCFKHQEALKLFCEVDKEAICVVCRESRSHKQHSVLPLEEVVQEYQVL 210 220 230 240 250 260 300 310 fj1693 EMRECGGMKGVER gi|114 SC 270 >>gi|114603976|ref|XP_001158131.1| PREDICTED: similar to (283 aa) initn: 1253 init1: 857 opt: 1782 Z-score: 1939.7 bits: 366.9 E(): 2.1e-99 Smith-Waterman score: 1782; 94.118% identity (95.221% similar) in 272 aa overlap (27-296:1-267) 10 20 30 40 50 60 fj1693 FGGRPAGASPLLSSKLTYLHLPAGIKMAGYATTPSPMQTLQEEAVCAICLDYFKDPVSIS ::::::::::.::::::::::::::::::::::: gi|114 MAGYATTPSPVQTLQEEAVCAICLDYFKDPVSIS 10 20 30 70 80 90 100 110 fj1693 CGHNFCRGCVTQLWSKEDEEDQNEEEDEWEEEE-DEEAVGAMDGWDGSIREVLYRGNADE ::::::::::::::.:::: ::::::::: :::::::.:::::::::: ::::::: gi|114 CGHNFCRGCVTQLWGKEDE-----EEDEWEEEEEDEEAVGAVDGWDGSIREVSYRGNADE 40 50 60 70 80 120 130 140 150 160 170 fj1693 ELFQDQDDDELWLGDSGITNWDNVDYMWDEEEEEEEDQDYYLGGLRPDLRIDVYREEE-I ::::::::::::::::: ::::::::::::::::::::: :::::::::::::::::: gi|114 ELFQDQDDDELWLGDSGRTNWDNVDYMWDEEEEEEEDQDCYLGGLRPDLRIDVYREEEET 90 100 110 120 130 140 180 190 200 210 220 230 fj1693 LEAYDEDEDEELYPDIHPPPSLPLPGQFTCPQCRKSFTRRSFRPNLQLANMVQIIRQMCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LEAYDEDEDEELYPDIHPPPSLPLPGQFTCPQCRKSFTRRSFRPNLQLANMVQIIRQMCP 150 160 170 180 190 200 240 250 260 270 280 290 fj1693 TPYRGNRSNDQGMCFKHQEALKLFCEVDKEAICVVCRESRSHKQHSVLPLEEVVQEYQVR :::: ::::::: ::::::::::::::::::::::::::::::::::::::::::::: gi|114 TPYRENRSNDQGTCFKHQEALKLFCEVDKEAICVVCRESRSHKQHSVLPLEEVVQEYQKI 210 220 230 240 250 260 300 310 fj1693 EMRECGGMKGVER gi|114 GSTSSVELSESVGQ 270 280 >>gi|114603978|ref|XP_001158187.1| PREDICTED: tripartite (293 aa) initn: 1253 init1: 857 opt: 1782 Z-score: 1939.5 bits: 366.9 E(): 2.2e-99 Smith-Waterman score: 1782; 94.118% identity (95.221% similar) in 272 aa overlap (27-296:1-267) 10 20 30 40 50 60 fj1693 FGGRPAGASPLLSSKLTYLHLPAGIKMAGYATTPSPMQTLQEEAVCAICLDYFKDPVSIS ::::::::::.::::::::::::::::::::::: gi|114 MAGYATTPSPVQTLQEEAVCAICLDYFKDPVSIS 10 20 30 70 80 90 100 110 fj1693 CGHNFCRGCVTQLWSKEDEEDQNEEEDEWEEEE-DEEAVGAMDGWDGSIREVLYRGNADE ::::::::::::::.:::: ::::::::: :::::::.:::::::::: ::::::: gi|114 CGHNFCRGCVTQLWGKEDE-----EEDEWEEEEEDEEAVGAVDGWDGSIREVSYRGNADE 40 50 60 70 80 120 130 140 150 160 170 fj1693 ELFQDQDDDELWLGDSGITNWDNVDYMWDEEEEEEEDQDYYLGGLRPDLRIDVYREEE-I ::::::::::::::::: ::::::::::::::::::::: :::::::::::::::::: gi|114 ELFQDQDDDELWLGDSGRTNWDNVDYMWDEEEEEEEDQDCYLGGLRPDLRIDVYREEEET 90 100 110 120 130 140 180 190 200 210 220 230 fj1693 LEAYDEDEDEELYPDIHPPPSLPLPGQFTCPQCRKSFTRRSFRPNLQLANMVQIIRQMCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LEAYDEDEDEELYPDIHPPPSLPLPGQFTCPQCRKSFTRRSFRPNLQLANMVQIIRQMCP 150 160 170 180 190 200 240 250 260 270 280 290 fj1693 TPYRGNRSNDQGMCFKHQEALKLFCEVDKEAICVVCRESRSHKQHSVLPLEEVVQEYQVR :::: ::::::: ::::::::::::::::::::::::::::::::::::::::::::: gi|114 TPYRENRSNDQGTCFKHQEALKLFCEVDKEAICVVCRESRSHKQHSVLPLEEVVQEYQEI 210 220 230 240 250 260 300 310 fj1693 EMRECGGMKGVER gi|114 KLETTLVGILQIEQESIHSKAYNQ 270 280 290 >>gi|111306972|gb|AAI19924.1| Tripartite motif-containin (288 aa) initn: 1238 init1: 748 opt: 1464 Z-score: 1594.8 bits: 303.1 E(): 3.5e-80 Smith-Waterman score: 1464; 76.512% identity (88.968% similar) in 281 aa overlap (27-302:1-272) 10 20 30 40 50 60 fj1693 FGGRPAGASPLLSSKLTYLHLPAGIKMAGYATTPSPMQTLQEEAVCAICLDYFKDPVSIS ::: ::::.:.::::::::::::::::::::::. gi|111 MAGSATTPNPLQTLQEEAVCAICLDYFKDPVSIG 10 20 30 70 80 90 100 110 fj1693 CGHNFCRGCVTQLWSKED-EEDQNEEEDEWEEEED-EEAVGAMDGWDGSIREVLYRGNAD ::::::::::::::.::: :.:..::::::::.:: ::::::. :: .:::::::.:::: gi|111 CGHNFCRGCVTQLWGKEDNEQDREEEEDEWEEDEDDEEAVGAIGGWGNSIREVLYQGNAD 40 50 60 70 80 90 120 130 140 150 160 170 fj1693 EELFQDQDDDELWLGDSGITNWDNVDYMWDEEEEEEEDQDYYLGGLRPDLRIDVY-REEE :::::::.::: :.::.:: :..::.::.:: : .::::::: ::::.:: .::: gi|111 EELFQDQEDDEPWVGDGGIR--DSMDYVWDQEE----DTNYYLGGLRHDLRINVYLQEEE 100 110 120 130 140 180 190 200 210 220 230 fj1693 ILEAYDEDEDEELYPDIH--PPPSLPLPGQFTCPQCRKSFTRRSFRPNLQLANMVQIIRQ ::: :::: ::::::: : :::. : : ::::::::::: ::::::::::::::::::: gi|111 ILEEYDED-DEELYPDTHLAPPPA-P-PRQFTCPQCRKSFKRRSFRPNLQLANMVQIIRQ 150 160 170 180 190 200 240 250 260 270 280 290 fj1693 MCPTPYRGNRSNDQGMCFKHQEALKLFCEVDKEAICVVCRESRSHKQHSVLPLEEVVQEY ::::: : .: ::: .: ::::::::.::::::::::.::::::::::::.::.:.:.:: gi|111 MCPTPNRESRVNDQDICSKHQEALKLYCEVDKEAICVICRESRSHKQHSVVPLDEAVHEY 210 220 230 240 250 260 300 310 fj1693 QVREMRECGGMKGVER . ..:.. gi|111 KEKKMEKLVKPCIPSAAITLRGN 270 280 311 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Sun Aug 10 18:08:15 2008 done: Sun Aug 10 18:10:54 2008 Total Scan time: 745.300 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]