# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofj17066.fasta.nr -Q fj17066.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fj17066, 413 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6830980 sequences Expectation_n fit: rho(ln(x))= 5.8423+/-0.000197; mu= 8.2625+/- 0.011 mean_var=107.7385+/-20.795, 0's: 44 Z-trim: 99 B-trim: 453 in 1/66 Lambda= 0.123563 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|27438053|gb|AAF76328.2|AF266479_1 rectachrome 1 ( 389) 2586 471.4 1.3e-130 gi|78099843|sp|Q9HC52|CBX8_HUMAN Chromobox protein ( 389) 2577 469.8 4.1e-130 gi|149723269|ref|XP_001490422.1| PREDICTED: simila ( 387) 2420 441.8 1.1e-121 gi|114670833|ref|XP_523736.2| PREDICTED: chromobox ( 378) 1451 269.1 1.1e-69 gi|73964898|ref|XP_850749.1| PREDICTED: similar to ( 379) 1441 267.3 3.6e-69 gi|112362126|gb|AAI20327.1| Chromobox homolog 8 (P ( 377) 1433 265.9 9.8e-69 gi|149054956|gb|EDM06773.1| chromobox homolog 8 (D ( 303) 1342 249.6 6.4e-64 gi|71051842|gb|AAH99206.1| Chromobox homolog 8 (Dr ( 366) 1342 249.6 7.3e-64 gi|18203390|sp|Q9QXV1.1|CBX8_MOUSE Chromobox prote ( 362) 1325 246.6 5.9e-63 gi|109118876|ref|XP_001109073.1| PREDICTED: simila ( 247) 1306 243.1 4.7e-62 gi|26342294|dbj|BAC34809.1| unnamed protein produc ( 193) 1170 218.7 7.8e-55 gi|62721113|gb|AAX94039.1| chromobox-like protein ( 244) 918 173.9 3.1e-41 gi|113197998|gb|AAI21700.1| Chromobox homolog 8 [X ( 362) 751 144.3 3.8e-32 gi|56540970|gb|AAH87529.1| LOC496172 protein [Xeno ( 361) 748 143.8 5.4e-32 gi|118099845|ref|XP_001231757.1| PREDICTED: simila ( 231) 724 139.3 7.6e-31 gi|46329609|gb|AAH68898.1| MGC83092 protein [Xenop ( 360) 721 138.9 1.5e-30 gi|47213785|emb|CAF92674.1| unnamed protein produc ( 353) 676 130.9 3.9e-28 gi|47218031|emb|CAG11436.1| unnamed protein produc ( 278) 668 129.4 8.8e-28 gi|37681749|gb|AAQ97752.1| chromobox homolog 8 [Da ( 342) 662 128.4 2.2e-27 gi|27374197|gb|AAN87353.1| polycomb 3 [Danio rerio ( 342) 662 128.4 2.2e-27 gi|116487870|gb|AAI25905.1| Chromobox homolog 8 (P ( 342) 661 128.2 2.4e-27 gi|63100857|gb|AAH95631.1| Zgc:111978 [Danio rerio ( 361) 653 126.8 6.8e-27 gi|158254099|gb|AAI54356.1| Zgc:111978 [Danio reri ( 361) 652 126.6 7.7e-27 gi|109094223|ref|XP_001096415.1| PREDICTED: chromo ( 679) 634 123.7 1.1e-25 gi|149444627|ref|XP_001517206.1| PREDICTED: simila ( 350) 625 121.8 2.1e-25 gi|109094227|ref|XP_001096637.1| PREDICTED: chromo ( 409) 624 121.7 2.7e-25 gi|15082394|gb|AAH12111.1| Chromobox homolog 6 [Ho ( 412) 621 121.2 3.9e-25 gi|37625078|gb|AAQ95736.1| neuronal pentraxin with ( 672) 619 121.0 7.1e-25 gi|17433289|sp|O95503|CBX6_HUMAN Chromobox protein ( 412) 613 119.7 1e-24 gi|89269920|emb|CAJ81884.1| chromobox homolog 6 [X ( 361) 555 109.3 1.2e-21 gi|126717382|gb|AAI33331.1| CBX6 protein [Bos taur ( 414) 543 107.3 6e-21 gi|52354633|gb|AAH82876.1| LOC494770 protein [Xeno ( 362) 535 105.8 1.5e-20 gi|12836026|dbj|BAB23467.1| unnamed protein produc ( 414) 535 105.8 1.6e-20 gi|48429261|sp|Q9DBY5|CBX6_MOUSE Chromobox protein ( 414) 535 105.8 1.6e-20 gi|73969073|ref|XP_538370.2| PREDICTED: similar to ( 415) 534 105.7 1.8e-20 gi|109094225|ref|XP_001096528.1| PREDICTED: chromo ( 419) 534 105.7 1.8e-20 gi|149065905|gb|EDM15778.1| rCG59919 [Rattus norve ( 414) 533 105.5 2.1e-20 gi|73969071|ref|XP_849882.1| PREDICTED: similar to ( 687) 534 105.9 2.6e-20 gi|168985103|emb|CAQ08065.1| chromobox homolog 6 [ ( 394) 529 104.7 3.3e-20 gi|74222082|dbj|BAE26859.1| unnamed protein produc ( 396) 529 104.8 3.3e-20 gi|148672682|gb|EDL04629.1| mCG11530, isoform CRA_ ( 405) 529 104.8 3.3e-20 gi|73969075|ref|XP_860095.1| PREDICTED: similar to ( 471) 525 104.1 6.1e-20 gi|157170006|gb|AAI52774.1| Neuronal pentraxin wit ( 469) 523 103.7 7.8e-20 gi|37693850|gb|AAQ98933.1| neuronal pentraxin 1.4 ( 469) 523 103.7 7.8e-20 gi|56540882|gb|AAH87122.1| Chromobox homolog 6 [Ra ( 396) 520 103.1 1e-19 gi|189516991|ref|XP_684076.3| PREDICTED: similar t ( 504) 512 101.8 3.2e-19 gi|194226845|ref|XP_001501782.2| PREDICTED: simila ( 686) 505 100.7 9.5e-19 gi|193787736|dbj|BAG52939.1| unnamed protein produ ( 130) 493 97.9 1.3e-18 gi|113374168|ref|NP_001013378.2| neuronal pentraxi ( 372) 499 99.4 1.3e-18 gi|37693848|gb|AAQ98932.1| neuronal pentraxin 1.1 ( 372) 499 99.4 1.3e-18 >>gi|27438053|gb|AAF76328.2|AF266479_1 rectachrome 1 [Ho (389 aa) initn: 2586 init1: 2586 opt: 2586 Z-score: 2499.9 bits: 471.4 E(): 1.3e-130 Smith-Waterman score: 2586; 100.000% identity (100.000% similar) in 389 aa overlap (25-413:1-389) 10 20 30 40 50 60 fj1706 LWSVVRCCCFSAPGSGQGGKRRVNMELSAVGERVFAAEALLKRRIRKGRMEYLVKWKGWS :::::::::::::::::::::::::::::::::::: gi|274 MELSAVGERVFAAEALLKRRIRKGRMEYLVKWKGWS 10 20 30 70 80 90 100 110 120 fj1706 QKYSTWEPEENILDARLLAAFEEREREMELYGPKKRGPKPKTFLLKAQAKAKAKTYEFRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|274 QKYSTWEPEENILDARLLAAFEEREREMELYGPKKRGPKPKTFLLKAQAKAKAKTYEFRS 40 50 60 70 80 90 130 140 150 160 170 180 fj1706 DSARGIRIPYPGRSPQDLASTSRAREGLRNMGLSPPASSTSTSSTCRAEAPRDRDRDRDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|274 DSARGIRIPYPGRSPQDLASTSRAREGLRNMGLSPPASSTSTSSTCRAEAPRDRDRDRDR 100 110 120 130 140 150 190 200 210 220 230 240 fj1706 DRERDRERERERERERERERERERGTSRVDDKPSSPGDSSKKRGPKPRKELPDPSQRPLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|274 DRERDRERERERERERERERERERGTSRVDDKPSSPGDSSKKRGPKPRKELPDPSQRPLG 160 170 180 190 200 210 250 260 270 280 290 300 fj1706 EPSAGLGEYLKGRKLDDTPSGAGKFPAGHSVIQLARRQDSDLVQCGVTSPSSAEATGKLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|274 EPSAGLGEYLKGRKLDDTPSGAGKFPAGHSVIQLARRQDSDLVQCGVTSPSSAEATGKLA 220 230 240 250 260 270 310 320 330 340 350 360 fj1706 VDTFPARVIKHRAAFLEAKGQGALDPNGTRVRHGSGPPSSVGGLYRDMGAQGGRPSLIAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|274 VDTFPARVIKHRAAFLEAKGQGALDPNGTRVRHGSGPPSSVGGLYRDMGAQGGRPSLIAR 280 290 300 310 320 330 370 380 390 400 410 fj1706 IPVARILGDPEEESWSPSLTNLEKVVVTDVTSNFLTVTIKESNTDQGFFKEKR ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|274 IPVARILGDPEEESWSPSLTNLEKVVVTDVTSNFLTVTIKESNTDQGFFKEKR 340 350 360 370 380 >>gi|78099843|sp|Q9HC52|CBX8_HUMAN Chromobox protein hom (389 aa) initn: 2577 init1: 2577 opt: 2577 Z-score: 2491.2 bits: 469.8 E(): 4.1e-130 Smith-Waterman score: 2577; 99.743% identity (99.743% similar) in 389 aa overlap (25-413:1-389) 10 20 30 40 50 60 fj1706 LWSVVRCCCFSAPGSGQGGKRRVNMELSAVGERVFAAEALLKRRIRKGRMEYLVKWKGWS :::::::::::::::::::::::::::::::::::: gi|780 MELSAVGERVFAAEALLKRRIRKGRMEYLVKWKGWS 10 20 30 70 80 90 100 110 120 fj1706 QKYSTWEPEENILDARLLAAFEEREREMELYGPKKRGPKPKTFLLKAQAKAKAKTYEFRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|780 QKYSTWEPEENILDARLLAAFEEREREMELYGPKKRGPKPKTFLLKAQAKAKAKTYEFRS 40 50 60 70 80 90 130 140 150 160 170 180 fj1706 DSARGIRIPYPGRSPQDLASTSRAREGLRNMGLSPPASSTSTSSTCRAEAPRDRDRDRDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|780 DSARGIRIPYPGRSPQDLASTSRAREGLRNMGLSPPASSTSTSSTCRAEAPRDRDRDRDR 100 110 120 130 140 150 190 200 210 220 230 240 fj1706 DRERDRERERERERERERERERERGTSRVDDKPSSPGDSSKKRGPKPRKELPDPSQRPLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|780 DRERDRERERERERERERERERERGTSRVDDKPSSPGDSSKKRGPKPRKELPDPSQRPLG 160 170 180 190 200 210 250 260 270 280 290 300 fj1706 EPSAGLGEYLKGRKLDDTPSGAGKFPAGHSVIQLARRQDSDLVQCGVTSPSSAEATGKLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|780 EPSAGLGEYLKGRKLDDTPSGAGKFPAGHSVIQLARRQDSDLVQCGVTSPSSAEATGKLA 220 230 240 250 260 270 310 320 330 340 350 360 fj1706 VDTFPARVIKHRAAFLEAKGQGALDPNGTRVRHGSGPPSSVGGLYRDMGAQGGRPSLIAR :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: gi|780 VDTFPARVIKHRAAFLEAKGQGALDPNGTRVRHGSGPPSSGGGLYRDMGAQGGRPSLIAR 280 290 300 310 320 330 370 380 390 400 410 fj1706 IPVARILGDPEEESWSPSLTNLEKVVVTDVTSNFLTVTIKESNTDQGFFKEKR ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|780 IPVARILGDPEEESWSPSLTNLEKVVVTDVTSNFLTVTIKESNTDQGFFKEKR 340 350 360 370 380 >>gi|149723269|ref|XP_001490422.1| PREDICTED: similar to (387 aa) initn: 1515 init1: 1515 opt: 2420 Z-score: 2340.0 bits: 441.8 E(): 1.1e-121 Smith-Waterman score: 2420; 93.830% identity (97.686% similar) in 389 aa overlap (25-413:1-387) 10 20 30 40 50 60 fj1706 LWSVVRCCCFSAPGSGQGGKRRVNMELSAVGERVFAAEALLKRRIRKGRMEYLVKWKGWS :::::::::::::::::::::::::::::::::::: gi|149 MELSAVGERVFAAEALLKRRIRKGRMEYLVKWKGWS 10 20 30 70 80 90 100 110 120 fj1706 QKYSTWEPEENILDARLLAAFEEREREMELYGPKKRGPKPKTFLLKAQAKAKAKTYEFRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QKYSTWEPEENILDARLLAAFEEREREMELYGPKKRGPKPKTFLLKAQAKAKAKTYEFRS 40 50 60 70 80 90 130 140 150 160 170 180 fj1706 DSARGIRIPYPGRSPQDLASTSRAREGLRNMGLSPPASSTSTSSTCRAEAPRDRDRDRDR ::::::::::::::::::::::::::::::::::::.::.:::::::.: :::::::::: gi|149 DSARGIRIPYPGRSPQDLASTSRAREGLRNMGLSPPGSSSSTSSTCRVEPPRDRDRDRDR 100 110 120 130 140 150 190 200 210 220 230 240 fj1706 DRERDRERERERERERERERERERGTSRVDDKPSSPGDSSKKRGPKPRKELPDPSQRPLG ::.:::::::::::::::::.: :..:.:::::::::::::::::::::: :::::::: gi|149 DRDRDRERERERERERERERDR--GVGRADDKPSSPGDSSKKRGPKPRKELLDPSQRPLG 160 170 180 190 200 210 250 260 270 280 290 300 fj1706 EPSAGLGEYLKGRKLDDTPSGAGKFPAGHSVIQLARRQDSDLVQCGVTSPSSAEATGKLA : : ::..::::::::::::::::::::::::::::::::::.::::.::: :::::::: gi|149 EASDGLSDYLKGRKLDDTPSGAGKFPAGHSVIQLARRQDSDLAQCGVASPSPAEATGKLA 220 230 240 250 260 270 310 320 330 340 350 360 fj1706 VDTFPARVIKHRAAFLEAKGQGALDPNGTRVRHGSGPPSSVGGLYRDMGAQGGRPSLIAR :::::::::::::::::::::.::::.: ::::::: :.::::::::::::::::::::: gi|149 VDTFPARVIKHRAAFLEAKGQSALDPGGPRVRHGSGTPGSVGGLYRDMGAQGGRPSLIAR 280 290 300 310 320 330 370 380 390 400 410 fj1706 IPVARILGDPEEESWSPSLTNLEKVVVTDVTSNFLTVTIKESNTDQGFFKEKR ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IPVARILGDPEEESWSPSLTNLEKVVVTDVTSNFLTVTIKESNTDQGFFKEKR 340 350 360 370 380 >>gi|114670833|ref|XP_523736.2| PREDICTED: chromobox hom (378 aa) initn: 1166 init1: 1166 opt: 1451 Z-score: 1406.6 bits: 269.1 E(): 1.1e-69 Smith-Waterman score: 1451; 66.043% identity (77.807% similar) in 374 aa overlap (25-382:1-366) 10 20 30 40 50 60 fj1706 LWSVVRCCCFSAPGSGQGGKRRVNMELSAVGERVFAAEALLKRRIRKGRMEYLVKWKGWS :::::::::::::::::::::::::::::::::::: gi|114 MELSAVGERVFAAEALLKRRIRKGRMEYLVKWKGWS 10 20 30 70 80 90 100 110 120 fj1706 QKYSTWEPEENILDARLLAAFEEREREMELYGPKKRGPKPKTFLLKAQAKAKAKTYEFRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QKYSTWEPEENILDARLLAAFEEREREMELYGPKKRGPKPKTFLLKAQAKAKAKTYEFRS 40 50 60 70 80 90 130 140 150 160 170 180 fj1706 DSARGIRIPYPGRSPQDLASTSRAREGLRNMGLSPPASSTSTSSTCRAEAPRDRDRDRDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DSARGIRIPYPGRSPQDLASTSRAREGLRNMGLSPPASSTSTSSTCRAEAPRDRDRDRDR 100 110 120 130 140 150 190 200 210 220 230 240 fj1706 DRERDRERERERERERERERERERGTSRVDDKPSSPGDSSKKRGPKPRKELPDPSQRPLG :: ::::.:::::::::::::::::::::::::::::::::::::::::: :::::::. gi|114 DR--DRERDRERERERERERERERGTSRVDDKPSSPGDSSKKRGPKPRKELKDPSQRPLA 160 170 180 190 200 210 250 260 270 280 290 300 fj1706 EPSAGLGEYLKGRKLDDTPSGAGKFPAGHSVIQLARRQDSDLVQCGVTSPSSAEATGKLA .:. : : . : . :: ...:. . :: . ..: . .. : ... gi|114 NPAPGRG--IPG---GEDPSLFSQYPSRPPAPILAPIAGALFLQRPFPNWGTHLAGIEVG 220 230 240 250 260 310 320 330 340 350 fj1706 V--------DTFPARVIKHRAAFLEAKGQGALDPNGTRVRHGSGPPSSVGGLYRDMGAQG : .. :.. . :. .:. : : . . :.: :: : ::. . .. gi|114 VGGRWGRLSSARPGESVALRTYWLHFFGPRAESGDPGRMRLRSGVLLSSGGILQR-ATPP 270 280 290 300 310 320 360 370 380 390 400 fj1706 GRPSLIARIPVARILGD------PE--EESWSPSLTNLEKVVVTDVTSNFLTVTIKESNT :: :... : : .:. :. .:. ::. :: gi|114 GRRRLVSEAPGPRRVGQSLPVPAPRSCRETHSPDPPNLASAPLNAQPRAY 330 340 350 360 370 410 fj1706 DQGFFKEKR >>gi|73964898|ref|XP_850749.1| PREDICTED: similar to Chr (379 aa) initn: 1417 init1: 1417 opt: 1441 Z-score: 1396.9 bits: 267.3 E(): 3.6e-69 Smith-Waterman score: 2336; 91.003% identity (95.373% similar) in 389 aa overlap (25-413:1-379) 10 20 30 40 50 60 fj1706 LWSVVRCCCFSAPGSGQGGKRRVNMELSAVGERVFAAEALLKRRIRKGRMEYLVKWKGWS :::::::::::::::::::::::::::::::::::: gi|739 MELSAVGERVFAAEALLKRRIRKGRMEYLVKWKGWS 10 20 30 70 80 90 100 110 120 fj1706 QKYSTWEPEENILDARLLAAFEEREREMELYGPKKRGPKPKTFLLKAQAKAKAKTYEFRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QKYSTWEPEENILDARLLAAFEEREREMELYGPKKRGPKPKTFLLKAQAKAKAKTYEFRS 40 50 60 70 80 90 130 140 150 160 170 180 fj1706 DSARGIRIPYPGRSPQDLASTSRAREGLRNMGLSPPASSTSTSSTCRAEAPRDRDRDRDR :::::::::::::::::::::::::.::::::::::.::.:::::::.: :::::: gi|739 DSARGIRIPYPGRSPQDLASTSRARDGLRNMGLSPPGSSSSTSSTCRVEPPRDRDR---- 100 110 120 130 140 150 190 200 210 220 230 240 fj1706 DRERDRERERERERERERERERERGTSRVDDKPSSPGDSSKKRGPKPRKELPDPSQRPLG ::::::::::::.::::::.::.:::::::::::::::::::::: :::::::: gi|739 ------ERERERERERERQRERERGASRTDDKPSSPGDSSKKRGPKPRKELLDPSQRPLG 160 170 180 190 200 250 260 270 280 290 300 fj1706 EPSAGLGEYLKGRKLDDTPSGAGKFPAGHSVIQLARRQDSDLVQCGVTSPSSAEATGKLA : : :::.::::::.:..: ::::::::::::::::::::::.::::.::: :::::::: gi|739 EASDGLGDYLKGRKVDEAPPGAGKFPAGHSVIQLARRQDSDLAQCGVASPSPAEATGKLA 210 220 230 240 250 260 310 320 330 340 350 360 fj1706 VDTFPARVIKHRAAFLEAKGQGALDPNGTRVRHGSGPPSSVGGLYRDMGAQGGRPSLIAR :::::::::::::.::::.:::::::.: ::::::: :.::::::::::::::::::::: gi|739 VDTFPARVIKHRATFLEARGQGALDPGGPRVRHGSGTPGSVGGLYRDMGAQGGRPSLIAR 270 280 290 300 310 320 370 380 390 400 410 fj1706 IPVARILGDPEEESWSPSLTNLEKVVVTDVTSNFLTVTIKESNTDQGFFKEKR ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 IPVARILGDPEEESWSPSLTNLEKVVVTDVTSNFLTVTIKESNTDQGFFKEKR 330 340 350 360 370 >>gi|112362126|gb|AAI20327.1| Chromobox homolog 8 (Pc cl (377 aa) initn: 1433 init1: 1433 opt: 1433 Z-score: 1389.2 bits: 265.9 E(): 9.8e-69 Smith-Waterman score: 2333; 91.517% identity (94.859% similar) in 389 aa overlap (25-413:1-377) 10 20 30 40 50 60 fj1706 LWSVVRCCCFSAPGSGQGGKRRVNMELSAVGERVFAAEALLKRRIRKGRMEYLVKWKGWS :::::::::::::::::::::::::::::::::::: gi|112 MELSAVGERVFAAEALLKRRIRKGRMEYLVKWKGWS 10 20 30 70 80 90 100 110 120 fj1706 QKYSTWEPEENILDARLLAAFEEREREMELYGPKKRGPKPKTFLLKAQAKAKAKTYEFRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 QKYSTWEPEENILDARLLAAFEEREREMELYGPKKRGPKPKTFLLKAQAKAKAKTYEFRS 40 50 60 70 80 90 130 140 150 160 170 180 fj1706 DSARGIRIPYPGRSPQDLASTSRAREGLRNMGLSPPASSTSTSSTCRAEAPRDRDRDRDR ::::::::::::::::.::::::.::::::::::::.::.:::::::.: :::.::::: gi|112 DSARGIRIPYPGRSPQELASTSRSREGLRNMGLSPPGSSSSTSSTCRVEPSRDRERDRDR 100 110 120 130 140 150 190 200 210 220 230 240 fj1706 DRERDRERERERERERERERERERGTSRVDDKPSSPGDSSKKRGPKPRKELPDPSQRPLG ::::::::::::::::.:::::::::::::::::::::: :::::::: gi|112 ------------ERERERERERERGTSRADDKPSSPGDSSKKRGPKPRKELLDPSQRPLG 160 170 180 190 200 250 260 270 280 290 300 fj1706 EPSAGLGEYLKGRKLDDTPSGAGKFPAGHSVIQLARRQDSDLVQCGVTSPSSAEATGKLA ::: :::.:::::::::: :::::::::::::::::::::::.::::.::: :::::::: gi|112 EPSDGLGDYLKGRKLDDTASGAGKFPAGHSVIQLARRQDSDLAQCGVASPSPAEATGKLA 210 220 230 240 250 260 310 320 330 340 350 360 fj1706 VDTFPARVIKHRAAFLEAKGQGALDPNGTRVRHGSGPPSSVGGLYRDMGAQGGRPSLIAR ::::::::::::::::::::::.:::.: ::::::: :.::::::::::::::::::::: gi|112 VDTFPARVIKHRAAFLEAKGQGTLDPGGPRVRHGSGTPGSVGGLYRDMGAQGGRPSLIAR 270 280 290 300 310 320 370 380 390 400 410 fj1706 IPVARILGDPEEESWSPSLTNLEKVVVTDVTSNFLTVTIKESNTDQGFFKEKR ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 IPVARILGDPEEESWSPSLTNLEKVVVTDVTSNFLTVTIKESNTDQGFFKEKR 330 340 350 360 370 >>gi|149054956|gb|EDM06773.1| chromobox homolog 8 (Droso (303 aa) initn: 1791 init1: 1338 opt: 1342 Z-score: 1302.8 bits: 249.6 E(): 6.4e-64 Smith-Waterman score: 1799; 86.196% identity (90.184% similar) in 326 aa overlap (88-413:1-303) 60 70 80 90 100 110 fj1706 GWSQKYSTWEPEENILDARLLAAFEEREREMELYGPKKRGPKPKTFLLKAQAKAKAKTYE :::::::::::::::::::::::::::::: gi|149 MELYGPKKRGPKPKTFLLKAQAKAKAKTYE 10 20 30 120 130 140 150 160 170 fj1706 FRSDSARGIRIPYPGRSPQDLASTSRAREGLRNMGLSPPASSTSTSSTCRAEAPRDRDRD :::::.::::::::::::::::::::::::::: :: ::.::::: :::. ::::::: gi|149 FRSDSTRGIRIPYPGRSPQDLASTSRAREGLRNTGLPPPGSSTST---CRADPPRDRDRD 40 50 60 70 80 180 190 200 210 220 230 fj1706 RDRDRERDRERERERERERERERERERGTSRVDDKPSSPGDSSKKRGPKPRKELPDPSQR ::: ::.:::::::.:::::::::::::::::::: ::::: gi|149 RDR--------------------ERDRGTSRVDEKPSSPGDSSKKRGPKPRKELLDPSQR 90 100 110 120 240 250 260 270 280 290 fj1706 PLGEPSAGLGEYLKGRKLDDTPSGAGKFPAGHSVIQLARRQDSDLVQCGVTSPSSAEATG :::::: ::::::::::::.:::: ::: :::::::::::::::::: ::::::::::.: gi|149 PLGEPSDGLGEYLKGRKLDETPSGIGKFSAGHSVIQLARRQDSDLVQYGVTSPSSAEASG 130 140 150 160 170 180 300 310 320 330 340 350 fj1706 KLAVDTFPARVIKHRAAFLEAKGQGALDPNGTRVRHGSGPPSSVGGLYRDMGAQGGRPSL :::.:::::::::::::.:::::::::::.::::::.:: :.:::.:::::::::::::: gi|149 KLAADTFPARVIKHRAALLEAKGQGALDPGGTRVRHSSGTPGSVGSLYRDMGAQGGRPSL 190 200 210 220 230 240 360 370 380 390 400 410 fj1706 IARIPVARILGDPEEESWSPSLTNLEKVVVTDVTSNFLTVTIKESNTDQGFFKEKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IARIPVARILGDPEEESWSPSLTNLEKVVVTDVTSNFLTVTIKESNTDQGFFKEKR 250 260 270 280 290 300 >>gi|71051842|gb|AAH99206.1| Chromobox homolog 8 (Drosop (366 aa) initn: 2205 init1: 1338 opt: 1342 Z-score: 1301.7 bits: 249.6 E(): 7.3e-64 Smith-Waterman score: 2213; 88.432% identity (91.774% similar) in 389 aa overlap (25-413:1-366) 10 20 30 40 50 60 fj1706 LWSVVRCCCFSAPGSGQGGKRRVNMELSAVGERVFAAEALLKRRIRKGRMEYLVKWKGWS :::::::::::::::::::::::::::::::::::: gi|710 MELSAVGERVFAAEALLKRRIRKGRMEYLVKWKGWS 10 20 30 70 80 90 100 110 120 fj1706 QKYSTWEPEENILDARLLAAFEEREREMELYGPKKRGPKPKTFLLKAQAKAKAKTYEFRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|710 QKYSTWEPEENILDARLLAAFEEREREMELYGPKKRGPKPKTFLLKAQAKAKAKTYEFRS 40 50 60 70 80 90 130 140 150 160 170 180 fj1706 DSARGIRIPYPGRSPQDLASTSRAREGLRNMGLSPPASSTSTSSTCRAEAPRDRDRDRDR ::.::::::::::::::::::::::::::: :: ::.::: :::::. :::::::::: gi|710 DSTRGIRIPYPGRSPQDLASTSRAREGLRNTGLPPPGSST---STCRADPPRDRDRDRDR 100 110 120 130 140 150 190 200 210 220 230 240 fj1706 DRERDRERERERERERERERERERGTSRVDDKPSSPGDSSKKRGPKPRKELPDPSQRPLG ::.:::::::.:::::::::::::::::::: :::::::: gi|710 --------------------ERDRGTSRVDEKPSSPGDSSKKRGPKPRKELLDPSQRPLG 160 170 180 190 250 260 270 280 290 300 fj1706 EPSAGLGEYLKGRKLDDTPSGAGKFPAGHSVIQLARRQDSDLVQCGVTSPSSAEATGKLA ::: ::::::::::::.:::: ::: :::::::::::::::::: ::::::::::.:::: gi|710 EPSDGLGEYLKGRKLDETPSGIGKFSAGHSVIQLARRQDSDLVQYGVTSPSSAEASGKLA 200 210 220 230 240 250 310 320 330 340 350 360 fj1706 VDTFPARVIKHRAAFLEAKGQGALDPNGTRVRHGSGPPSSVGGLYRDMGAQGGRPSLIAR .:::::::::::::.:::::::::::.::::::.:: :.:::.::::::::::::::::: gi|710 ADTFPARVIKHRAALLEAKGQGALDPGGTRVRHSSGTPGSVGSLYRDMGAQGGRPSLIAR 260 270 280 290 300 310 370 380 390 400 410 fj1706 IPVARILGDPEEESWSPSLTNLEKVVVTDVTSNFLTVTIKESNTDQGFFKEKR ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|710 IPVARILGDPEEESWSPSLTNLEKVVVTDVTSNFLTVTIKESNTDQGFFKEKR 320 330 340 350 360 >>gi|18203390|sp|Q9QXV1.1|CBX8_MOUSE Chromobox protein h (362 aa) initn: 2192 init1: 1325 opt: 1325 Z-score: 1285.4 bits: 246.6 E(): 5.9e-63 Smith-Waterman score: 2182; 87.661% identity (91.003% similar) in 389 aa overlap (25-413:1-362) 10 20 30 40 50 60 fj1706 LWSVVRCCCFSAPGSGQGGKRRVNMELSAVGERVFAAEALLKRRIRKGRMEYLVKWKGWS :::::::::::::::::::::::::::::::::::: gi|182 MELSAVGERVFAAEALLKRRIRKGRMEYLVKWKGWS 10 20 30 70 80 90 100 110 120 fj1706 QKYSTWEPEENILDARLLAAFEEREREMELYGPKKRGPKPKTFLLKAQAKAKAKTYEFRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 QKYSTWEPEENILDARLLAAFEEREREMELYGPKKRGPKPKTFLLKAQAKAKAKTYEFRS 40 50 60 70 80 90 130 140 150 160 170 180 fj1706 DSARGIRIPYPGRSPQDLASTSRAREGLRNMGLSPPASSTSTSSTCRAEAPRDRDRDRDR ::.::::::::::::::::::::::::::: :: ::.::: :::::. ::::::.::: gi|182 DSTRGIRIPYPGRSPQDLASTSRAREGLRNTGLPPPGSST---STCRADPPRDRDRERDR 100 110 120 130 140 150 190 200 210 220 230 240 fj1706 DRERDRERERERERERERERERERGTSRVDDKPSSPGDSSKKRGPKPRKELPDPSQRPLG :::::::::::::::::::::::::: :::::::: gi|182 ------------------------GTSRVDDKPSSPGDSSKKRGPKPRKEPLDPSQRPLG 160 170 180 250 260 270 280 290 300 fj1706 EPSAGLGEYLKGRKLDDTPSGAGKFPAGHSVIQLARRQDSDLVQCGVTSPSSAEATGKLA ::::::::::::::::.: ::.:::::::::::::::::::::: ::::::::::..::: gi|182 EPSAGLGEYLKGRKLDETSSGTGKFPAGHSVIQLARRQDSDLVQYGVTSPSSAEASSKLA 190 200 210 220 230 240 310 320 330 340 350 360 fj1706 VDTFPARVIKHRAAFLEAKGQGALDPNGTRVRHGSGPPSSVGGLYRDMGAQGGRPSLIAR ::::::::::::::::::::::::::.:.::::.:: :.:::.::::::::::::::::: gi|182 VDTFPARVIKHRAAFLEAKGQGALDPGGARVRHSSGTPASVGSLYRDMGAQGGRPSLIAR 250 260 270 280 290 300 370 380 390 400 410 fj1706 IPVARILGDPEEESWSPSLTNLEKVVVTDVTSNFLTVTIKESNTDQGFFKEKR ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 IPVARILGDPEEESWSPSLTNLEKVVVTDVTSNFLTVTIKESNTDQGFFKEKR 310 320 330 340 350 360 >>gi|109118876|ref|XP_001109073.1| PREDICTED: similar to (247 aa) initn: 1149 init1: 1149 opt: 1306 Z-score: 1269.3 bits: 243.1 E(): 4.7e-62 Smith-Waterman score: 1306; 85.417% identity (89.167% similar) in 240 aa overlap (25-262:1-236) 10 20 30 40 50 60 fj1706 LWSVVRCCCFSAPGSGQGGKRRVNMELSAVGERVFAAEALLKRRIRKGRMEYLVKWKGWS :::::::::::::::::::::::::::::::::::: gi|109 MELSAVGERVFAAEALLKRRIRKGRMEYLVKWKGWS 10 20 30 70 80 90 100 110 120 fj1706 QKYSTWEPEENILDARLLAAFEEREREMELYGPKKRGPKPKTFLLKAQAKAKAKTYEFRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QKYSTWEPEENILDARLLAAFEEREREMELYGPKKRGPKPKTFLLKAQAKAKAKTYEFRS 40 50 60 70 80 90 130 140 150 160 170 180 fj1706 DSARGIRIPYPGRSPQDLASTSRAREGLRNMGLSPPASSTSTSSTCRAEAPRDRDRDRDR ::::::::::::::::::::::::::::::::::::::::::::::::: ::::: : gi|109 DSARGIRIPYPGRSPQDLASTSRAREGLRNMGLSPPASSTSTSSTCRAEPPRDRD----R 100 110 120 130 140 150 190 200 210 220 230 fj1706 DRERDRERERERERERERERERERGTSRVDDKPSSPGDSSKKRGPKPR-KELPDPSQRP- :::::::::::::::::::::::::::::::::::::::::::::::. . : :. : gi|109 DRERDRERERERERERERERERERGTSRVDDKPSSPGDSSKKRGPKPEVSGLRGPGASPR 160 170 180 190 200 210 240 250 260 270 280 290 fj1706 LGEPSAGLGEYLKGRKLDDTPSGAGKFPAGHSVIQLARRQDSDLVQCGVTSPSSAEATGK .: . . .. : :. : gi|109 CPQPPGPAPRSCCETRFPDPPNPASAPRNAEPRAY 220 230 240 413 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Sun Aug 10 18:14:47 2008 done: Sun Aug 10 18:17:16 2008 Total Scan time: 834.990 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]