hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-18171730/chunk_1/iprscan-20080810-18171730.nocrc
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Query sequence: fj17066
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00298                                                  75.9    5.1e-18   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00298    1/1      34    86 ..     1    63 []    75.9  5.1e-18

Alignments of top-scoring domains:
SM00298: domain 1 of 1, from 34 to 86: score 75.9, E = 5.1e-18
                   *->eyeivEkIldhrwekkkgeveYLVKWkGysysedtWEpeenleemLk
                      +++ +E+ l++r  ++kg+ eYLVKWkG+s ++ tWEpeen++    
     fj17066    34    VFA-AEALLKRR--IRKGRMEYLVKWKGWSQKYSTWEPEENIL---- 73   

                   kkncekkldeykkrek<-*
                      + ++l+++++re+   
     fj17066    74 ---DARLLAAFEERER    86   

//