# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofj18320.fasta.nr -Q fj18320.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fj18320, 431 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6839490 sequences Expectation_n fit: rho(ln(x))= 5.2150+/-0.000189; mu= 10.6346+/- 0.011 mean_var=70.7935+/-14.040, 0's: 45 Z-trim: 58 B-trim: 3079 in 2/63 Lambda= 0.152432 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|37537922|sp|Q13309|SKP2_HUMAN S-phase kinase-as ( 424) 2848 635.3 6.9e-180 gi|61358276|gb|AAX41540.1| S-phase kinase-associat ( 424) 2839 633.4 2.7e-179 gi|995826|gb|AAC50242.1| cyclin A/CDK2-associated ( 435) 2803 625.5 6.7e-177 gi|149732794|ref|XP_001499872.1| PREDICTED: S-phas ( 424) 2683 599.1 5.8e-169 gi|73954319|ref|XP_546346.2| PREDICTED: similar to ( 749) 2681 598.8 1.2e-168 gi|154426090|gb|AAI51276.1| SKP2 protein [Bos taur ( 424) 2641 589.8 3.5e-166 gi|109076969|ref|XP_001093834.1| PREDICTED: simila ( 422) 2592 579.1 6.1e-163 gi|194379234|dbj|BAG58168.1| unnamed protein produ ( 390) 2581 576.6 3.1e-162 gi|149016456|gb|EDL75674.1| similar to S-phase kin ( 423) 2539 567.4 2e-159 gi|37538008|sp|Q9Z0Z3|SKP2_MOUSE S-phase kinase-as ( 424) 2510 561.0 1.6e-157 gi|26328739|dbj|BAC28108.1| unnamed protein produc ( 424) 2502 559.3 5.5e-157 gi|119576339|gb|EAW55935.1| S-phase kinase-associa ( 358) 2375 531.3 1.2e-148 gi|12655171|gb|AAH01441.1| S-phase kinase-associat ( 410) 2375 531.3 1.4e-148 gi|19909966|dbj|BAB87202.1| SKP2-like protein type ( 442) 2375 531.3 1.5e-148 gi|114600583|ref|XP_001147386.1| PREDICTED: S-phas ( 450) 2375 531.3 1.5e-148 gi|149016455|gb|EDL75673.1| similar to S-phase kin ( 388) 2314 517.9 1.4e-144 gi|148671372|gb|EDL03319.1| S-phase kinase-associa ( 389) 2290 512.6 5.6e-143 gi|11513315|pdb|1FQV|A Chain A, Insights Into Scf ( 336) 2260 506.0 4.8e-141 gi|70909363|ref|NP_663443.1| S-phase kinase-associ ( 354) 2095 469.7 4.2e-130 gi|26336268|dbj|BAC31819.1| unnamed protein produc ( 354) 2091 468.8 7.8e-130 gi|126321691|ref|XP_001372928.1| PREDICTED: simila ( 422) 1988 446.2 5.9e-123 gi|53127522|emb|CAG31144.1| hypothetical protein [ ( 443) 1864 419.0 9.9e-115 gi|61608463|gb|AAX47081.1| S-phase kinase-associat ( 416) 1857 417.4 2.7e-114 gi|83318324|gb|AAI08520.1| MGC130923 protein [Xeno ( 418) 1623 366.0 8.5e-99 gi|80972563|gb|ABB53223.1| S-phase kinase-associat ( 420) 1619 365.1 1.6e-98 gi|119576341|gb|EAW55937.1| S-phase kinase-associa ( 239) 1570 354.1 1.8e-95 gi|11513337|pdb|1FS2|A Chain A, Insights Into Scf ( 272) 1432 323.8 2.7e-86 gi|194382382|dbj|BAG58946.1| unnamed protein produ ( 210) 1329 301.1 1.4e-79 gi|114600589|ref|XP_001147537.1| PREDICTED: S-phas ( 379) 1329 301.3 2.3e-79 gi|126631919|gb|AAI34166.1| Skp2 protein [Danio re ( 410) 1260 286.1 9e-75 gi|119913756|ref|XP_001252830.1| PREDICTED: simila ( 369) 1163 264.8 2.2e-68 gi|13097468|gb|AAH03468.1| Skp2 protein [Mus muscu ( 131) 827 190.6 1.7e-46 gi|194165773|gb|EDW80674.1| GK11443 [Drosophila wi ( 590) 756 175.4 2.8e-41 gi|54639359|gb|EAL28761.1| GA22024-PA [Drosophila ( 555) 741 172.1 2.6e-40 gi|193916383|gb|EDW15250.1| GI22887 [Drosophila mo ( 589) 739 171.6 3.7e-40 gi|190650511|gb|EDV47766.1| GG11654 [Drosophila er ( 561) 738 171.4 4.1e-40 gi|194142233|gb|EDW58641.1| GJ14183 [Drosophila vi ( 584) 733 170.3 9.2e-40 gi|194133302|gb|EDW54818.1| GM10708 [Drosophila se ( 557) 727 169.0 2.2e-39 gi|25012422|gb|AAN71318.1| RE15215p [Drosophila me ( 499) 722 167.9 4.3e-39 gi|194198010|gb|EDX11586.1| GD19685 [Drosophila si ( 557) 722 167.9 4.7e-39 gi|28381118|gb|AAF52143.2| CG9772-PA, isoform A [D ( 559) 722 167.9 4.7e-39 gi|28381117|gb|AAF52144.2| CG9772-PB, isoform B [D ( 581) 722 167.9 4.9e-39 gi|194182033|gb|EDW95644.1| GE25359 [Drosophila ya ( 561) 718 167.0 8.7e-39 gi|190627337|gb|EDV42861.1| GF16815 [Drosophila an ( 561) 714 166.1 1.6e-38 gi|193893754|gb|EDV92620.1| GH18735 [Drosophila gr ( 579) 706 164.4 5.6e-38 gi|108879287|gb|EAT43512.1| S-phase kinase-associa ( 393) 687 160.1 7.4e-37 gi|108879288|gb|EAT43513.1| S-phase kinase-associa ( 470) 687 160.1 8.6e-37 gi|157019821|gb|EAA04810.3| AGAP005297-PA [Anophel ( 392) 660 154.2 4.5e-35 gi|167876970|gb|EDS40353.1| S-phase kinase-associa ( 463) 649 151.8 2.8e-34 gi|66533703|ref|XP_395497.2| PREDICTED: similar to ( 484) 649 151.8 2.9e-34 >>gi|37537922|sp|Q13309|SKP2_HUMAN S-phase kinase-associ (424 aa) initn: 2848 init1: 2848 opt: 2848 Z-score: 3384.7 bits: 635.3 E(): 6.9e-180 Smith-Waterman score: 2848; 100.000% identity (100.000% similar) in 424 aa overlap (8-431:1-424) 10 20 30 40 50 60 fj1832 TPGPADAMHRKHLQEIPDLSSNVATSFTWGWDSSKTSELLSGMGVSALEKEEPDSENIPQ ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 MHRKHLQEIPDLSSNVATSFTWGWDSSKTSELLSGMGVSALEKEEPDSENIPQ 10 20 30 40 50 70 80 90 100 110 120 fj1832 ELLSNLGHPESPPRKRLKSKGSDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGIFSCLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 ELLSNLGHPESPPRKRLKSKGSDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGIFSCLC 60 70 80 90 100 110 130 140 150 160 170 180 fj1832 LPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 LPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQP 120 130 140 150 160 170 190 200 210 220 230 240 fj1832 LAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 LAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLV 180 190 200 210 220 230 250 260 270 280 290 300 fj1832 RLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 RLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 240 250 260 270 280 290 310 320 330 340 350 360 fj1832 RKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 RKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETL 300 310 320 330 340 350 370 380 390 400 410 420 fj1832 LELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 LELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIK 360 370 380 390 400 410 430 fj1832 CRLTLQKPSCL ::::::::::: gi|375 CRLTLQKPSCL 420 >>gi|61358276|gb|AAX41540.1| S-phase kinase-associated p (424 aa) initn: 2839 init1: 2839 opt: 2839 Z-score: 3374.0 bits: 633.4 E(): 2.7e-179 Smith-Waterman score: 2839; 99.764% identity (99.764% similar) in 424 aa overlap (8-431:1-424) 10 20 30 40 50 60 fj1832 TPGPADAMHRKHLQEIPDLSSNVATSFTWGWDSSKTSELLSGMGVSALEKEEPDSENIPQ :::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|613 MHRKHLQEIPDLSSNVATSFTWGWDSSKTSELLSGMGVSALEKEVPDSENIPQ 10 20 30 40 50 70 80 90 100 110 120 fj1832 ELLSNLGHPESPPRKRLKSKGSDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGIFSCLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 ELLSNLGHPESPPRKRLKSKGSDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGIFSCLC 60 70 80 90 100 110 130 140 150 160 170 180 fj1832 LPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 LPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQP 120 130 140 150 160 170 190 200 210 220 230 240 fj1832 LAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 LAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLV 180 190 200 210 220 230 250 260 270 280 290 300 fj1832 RLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 RLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 240 250 260 270 280 290 310 320 330 340 350 360 fj1832 RKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 RKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETL 300 310 320 330 340 350 370 380 390 400 410 420 fj1832 LELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 LELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIK 360 370 380 390 400 410 430 fj1832 CRLTLQKPSCL ::::::::::: gi|613 CRLTLQKPSCL 420 >>gi|995826|gb|AAC50242.1| cyclin A/CDK2-associated p45 (435 aa) initn: 2801 init1: 1495 opt: 2803 Z-score: 3331.1 bits: 625.5 E(): 6.7e-177 Smith-Waterman score: 2803; 96.984% identity (98.144% similar) in 431 aa overlap (1-431:6-435) 10 20 30 40 50 fj1832 TPGPADAMHRKHLQEIPDLSSNVATSFTWGWDSSKTSELLSGMGVSALEKEEPDS ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|995 MHVFKTPGPADAMHRKHLQEIPDLSSNVATSFTWGWDSSKTSELLSGMGVSALEKEEPDS 10 20 30 40 50 60 60 70 80 90 100 110 fj1832 ENIPQELLSNLGHPESPPRKRLKSKGSDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|995 ENIPQELLSNLGHPESPPRKRLKSKGSDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGI 70 80 90 100 110 120 120 130 140 150 160 170 fj1832 FSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|995 FSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRS 130 140 150 160 170 180 180 190 200 210 220 230 fj1832 FMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAK :::::::::::::::: ::::::::::::::::::::::::::::: ::::::::::::: gi|995 FMDQPLAEHFSPFRVQDMDLSNSVIEVSTLHGILSQCSKLQNLSLE-LRLSDPIVNTLAK 190 200 210 220 230 240 250 260 270 280 290 fj1832 NSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQL ::::::::: :: :: .: :::.:::: :::::::::::.::::::::::::::::.::: gi|995 NSNLVRLNLPGCPGFPKFPLQTFLSSCPRLDELNLSWCFNFTEKHVQVAVAHVSETMTQL 240 250 260 270 280 290 300 310 320 330 340 350 fj1832 NLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDI ::::::::::::::::::::::::::::::.:::::::::::: :::::::::::::::: gi|995 NLSGYRKNLQKSDLSTLVRRCPNLVHLDLSNSVMLKNDCFQEFSQLNYLQHLSLSRCYDI 300 310 320 330 340 350 360 370 380 390 400 410 fj1832 IPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|995 IPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQE 360 370 380 390 400 410 420 430 fj1832 IWGIKCRLTLQKPSCL :::::::::::::::: gi|995 IWGIKCRLTLQKPSCL 420 430 >>gi|149732794|ref|XP_001499872.1| PREDICTED: S-phase ki (424 aa) initn: 2683 init1: 2683 opt: 2683 Z-score: 3188.6 bits: 599.1 E(): 5.8e-169 Smith-Waterman score: 2683; 92.925% identity (98.113% similar) in 424 aa overlap (8-431:1-424) 10 20 30 40 50 60 fj1832 TPGPADAMHRKHLQEIPDLSSNVATSFTWGWDSSKTSELLSGMGVSALEKEEPDSENIPQ ::::::::::: ::::.:::::::::::: ::::::::::::::: ::::::: gi|149 MHRKHLQEIPDQSSNVTTSFTWGWDSSKTCELLSGMGVSALEKEEVDSENIPQ 10 20 30 40 50 70 80 90 100 110 120 fj1832 ELLSNLGHPESPPRKRLKSKGSDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGIFSCLC :::::::::.:::::::::::.:::::::::::::::::::::::::::::::::::::: gi|149 ELLSNLGHPQSPPRKRLKSKGNDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGIFSCLC 60 70 80 90 100 110 130 140 150 160 170 180 fj1832 LPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQP ::::::::.::::::.:: ::::::::::::.:::::. :::::.::.::::::::.::: gi|149 LPELLKVSSVCKRWYHLAFDESLWQTLDLTGRNLHPDAIGRLLSRGVVAFRCPRSFIDQP 120 130 140 150 160 170 190 200 210 220 230 240 fj1832 LAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLV :.::::::::::::::::::.::::::::::::::::::::::.:::::::.::.::::: gi|149 LVEHFSPFRVQHMDLSNSVIDVSTLHGILSQCSKLQNLSLEGLQLSDPIVNNLAQNSNLV 180 190 200 210 220 230 250 260 270 280 290 300 fj1832 RLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY :::::::::::: ::.:::::::::::::::::.:::::::::::::::::::::::::: gi|149 RLNLSGCSGFSESALKTLLSSCSRLDELNLSWCYDFTEKHVQVAVAHVSETITQLNLSGY 240 250 260 270 280 290 310 320 330 340 350 360 fj1832 RKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETL :::::.::.:::: ::::::::::::::::::::: ::.::::::::::::::::::::: gi|149 RKNLQRSDVSTLVGRCPNLVHLDLSDSVMLKNDCFPEFYQLNYLQHLSLSRCYDIIPETL 300 310 320 330 340 350 370 380 390 400 410 420 fj1832 LELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIK :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::. gi|149 LELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTVGNKKNQEIWGIR 360 370 380 390 400 410 430 fj1832 CRLTLQKPSCL ::::::::::: gi|149 CRLTLQKPSCL 420 >>gi|73954319|ref|XP_546346.2| PREDICTED: similar to S-p (749 aa) initn: 2681 init1: 2681 opt: 2681 Z-score: 3182.7 bits: 598.8 E(): 1.2e-168 Smith-Waterman score: 2681; 92.111% identity (97.216% similar) in 431 aa overlap (1-431:319-749) 10 20 30 fj1832 TPGPADAMHRKHLQEIPDLSSNVATSFTWG :: .::::::::::::: ::::.:::::: gi|739 WGSELHALSRRAPKRESRRRAVLQLMHAFKTPEAVDAMHRKHLQEIPDQSSNVTTSFTWG 290 300 310 320 330 340 40 50 60 70 80 90 fj1832 WDSSKTSELLSGMGVSALEKEEPDSENIPQELLSNLGHPESPPRKRLKSKGSDKDFVIVR :::::::::::::::::::::: ::::::::::::::::.:::::::::::.:::::::: gi|739 WDSSKTSELLSGMGVSALEKEEVDSENIPQELLSNLGHPQSPPRKRLKSKGNDKDFVIVR 350 360 370 380 390 400 100 110 120 130 140 150 fj1832 RPKLNRENFPGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLT ::::::..::::::::::::::::::::::::::::::.::::::.:: ::::::::::: gi|739 RPKLNRDSFPGVSWDSLPDELLLGIFSCLCLPELLKVSSVCKRWYHLAFDESLWQTLDLT 410 420 430 440 450 460 160 170 180 190 200 210 fj1832 GKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILS :.:::::: :::::.::.:::::::::::::.:::: :::::::::::::.::::::::: gi|739 GRNLHPDVIGRLLSRGVVAFRCPRSFMDQPLVEHFSSFRVQHMDLSNSVIDVSTLHGILS 470 480 490 500 510 520 220 230 240 250 260 270 fj1832 QCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNL :::::::::::::.:::::::.::.::::::::::::::::: ::.:::::::::::::: gi|739 QCSKLQNLSLEGLQLSDPIVNNLAQNSNLVRLNLSGCSGFSESALKTLLSSCSRLDELNL 530 540 550 560 570 580 280 290 300 310 320 330 fj1832 SWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVML :::.:::::::::::::::::::::::::::::::.::.:::: :::::::::::::::: gi|739 SWCYDFTEKHVQVAVAHVSETITQLNLSGYRKNLQRSDVSTLVGRCPNLVHLDLSDSVML 590 600 610 620 630 640 340 350 360 370 380 390 fj1832 KNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEAL ::::: ::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KNDCFPEFYQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEAL 650 660 670 680 690 700 400 410 420 430 fj1832 PHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQKPSCL :::::: :::::::::: :::::::::::.::::::::::: gi|739 PHLQINGSHFTTIARPTTGNKKNQEIWGIRCRLTLQKPSCL 710 720 730 740 >>gi|154426090|gb|AAI51276.1| SKP2 protein [Bos taurus] (424 aa) initn: 2641 init1: 2641 opt: 2641 Z-score: 3138.7 bits: 589.8 E(): 3.5e-166 Smith-Waterman score: 2641; 90.566% identity (98.585% similar) in 424 aa overlap (8-431:1-424) 10 20 30 40 50 60 fj1832 TPGPADAMHRKHLQEIPDLSSNVATSFTWGWDSSKTSELLSGMGVSALEKEEPDSENIPQ ::::::::::: ::::.:::::::::::::::::::::::::::: ::::::: gi|154 MHRKHLQEIPDQSSNVTTSFTWGWDSSKTSELLSGMGVSALEKEEVDSENIPQ 10 20 30 40 50 70 80 90 100 110 120 fj1832 ELLSNLGHPESPPRKRLKSKGSDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGIFSCLC :::::::::.:::::::::::.:::::::::::::::::::::::::::::::::::::: gi|154 ELLSNLGHPQSPPRKRLKSKGNDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGIFSCLC 60 70 80 90 100 110 130 140 150 160 170 180 fj1832 LPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQP ::::::::.::::::.:: :::::::.::.:.::.:::.:::::.::.:::::::::::: gi|154 LPELLKVSSVCKRWYHLAFDESLWQTVDLAGRNLYPDVVGRLLSRGVVAFRCPRSFMDQP 120 130 140 150 160 170 190 200 210 220 230 240 fj1832 LAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLV :.:::::::.::.:::::::..:::::.::.:::::::::::::::::.:..::.:.::. gi|154 LVEHFSPFRLQHLDLSNSVIDASTLHGLLSHCSKLQNLSLEGLRLSDPVVDNLAQNTNLL 180 190 200 210 220 230 250 260 270 280 290 300 fj1832 RLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY :::::::::::: ::.:::::::::::::::::.::::::::.::::::.:::::::::: gi|154 RLNLSGCSGFSESALKTLLSSCSRLDELNLSWCYDFTEKHVQMAVAHVSKTITQLNLSGY 240 250 260 270 280 290 310 320 330 340 350 360 fj1832 RKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETL :::::.::.:::: ::::::::::::::::::::: ::.::::::::::::::::::::: gi|154 RKNLQRSDVSTLVGRCPNLVHLDLSDSVMLKNDCFPEFYQLNYLQHLSLSRCYDIIPETL 300 310 320 330 340 350 370 380 390 400 410 420 fj1832 LELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|154 LELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIK 360 370 380 390 400 410 430 fj1832 CRLTLQKPSCL :::.:.::::: gi|154 CRLSLEKPSCL 420 >>gi|109076969|ref|XP_001093834.1| PREDICTED: similar to (422 aa) initn: 2600 init1: 1990 opt: 2592 Z-score: 3080.5 bits: 579.1 E(): 6.1e-163 Smith-Waterman score: 2592; 92.217% identity (96.462% similar) in 424 aa overlap (8-431:1-422) 10 20 30 40 50 60 fj1832 TPGPADAMHRKHLQEIPDLSSNVATSFTWGWDSSKTSELLSGMGVSALEKEEPDSENIPQ ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MHRKHLQEIPDLSSNVATSFTWGWDSSKTSELLSGMGVSALEKEEPDSENIPQ 10 20 30 40 50 70 80 90 100 110 120 fj1832 ELLSNLGHPESPPRKRLKSKGSDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGIFSCLC ::.:::::::::::::::::::.:::::::::::::::::: : .:.::. :.: gi|109 ELFSNLGHPESPPRKRLKSKGSEKDFVIVRRPKLNRENFPGK--DMRYAGILVGIYVCVC 60 70 80 90 100 110 130 140 150 160 170 180 fj1832 LPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQP . .: ::.: . . .:.:::::::::::::::::::::::::::::::::::::::::: gi|109 ISSVLLVSNVVEDFQHLVSDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQP 120 130 140 150 160 170 190 200 210 220 230 240 fj1832 LAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLV :::::::::::::::::::::::::.:::::::::::::::::::::::::.::.::::: gi|109 LAEHFSPFRVQHMDLSNSVIEVSTLQGILSQCSKLQNLSLEGLRLSDPIVNNLAQNSNLV 180 190 200 210 220 230 250 260 270 280 290 300 fj1832 RLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|109 RLNLSGCSGFSEFALKTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 240 250 260 270 280 290 310 320 330 340 350 360 fj1832 RKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETL :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|109 RKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKTDCFQEFFQLNYLQHLSLSRCYDIIPETL 300 310 320 330 340 350 370 380 390 400 410 420 fj1832 LELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIK 360 370 380 390 400 410 430 fj1832 CRLTLQKPSCL ::::::::::: gi|109 CRLTLQKPSCL 420 >>gi|194379234|dbj|BAG58168.1| unnamed protein product [ (390 aa) initn: 2581 init1: 2581 opt: 2581 Z-score: 3067.9 bits: 576.6 E(): 3.1e-162 Smith-Waterman score: 2581; 100.000% identity (100.000% similar) in 384 aa overlap (48-431:7-390) 20 30 40 50 60 70 fj1832 DLSSNVATSFTWGWDSSKTSELLSGMGVSALEKEEPDSENIPQELLSNLGHPESPPRKRL :::::::::::::::::::::::::::::: gi|194 MHRKHLLEKEEPDSENIPQELLSNLGHPESPPRKRL 10 20 30 80 90 100 110 120 130 fj1832 KSKGSDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KSKGSDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRL 40 50 60 70 80 90 140 150 160 170 180 190 fj1832 ASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSN 100 110 120 130 140 150 200 210 220 230 240 250 fj1832 SVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQT 160 170 180 190 200 210 260 270 280 290 300 310 fj1832 LLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCP 220 230 240 250 260 270 320 330 340 350 360 370 fj1832 NLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 NLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 280 290 300 310 320 330 380 390 400 410 420 430 fj1832 VPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQKPSCL :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQKPSCL 340 350 360 370 380 390 >>gi|149016456|gb|EDL75674.1| similar to S-phase kinase- (423 aa) initn: 2539 init1: 2539 opt: 2539 Z-score: 3017.5 bits: 567.4 E(): 2e-159 Smith-Waterman score: 2539; 88.152% identity (96.209% similar) in 422 aa overlap (8-429:1-422) 10 20 30 40 50 60 fj1832 TPGPADAMHRKHLQEIPDLSSNVATSFTWGWDSSKTSELLSGMGVSALEKEEPDSENIPQ ::::::::::: ::::.:::::::::::::::::::::::::::: ::::::. gi|149 MHRKHLQEIPDQSSNVTTSFTWGWDSSKTSELLSGMGVSALEKEEVDSENIPH 10 20 30 40 50 70 80 90 100 110 120 fj1832 ELLSNLGHPESPPRKRLKSKGSDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGIFSCLC ::::::::.::::::::::::::::::.::::::::::::::::::::::::::::::: gi|149 GLLSNLGHPQSPPRKRLKSKGSDKDFVIIRRPKLNRENFPGVSWDSLPDELLLGIFSCLC 60 70 80 90 100 110 130 140 150 160 170 180 fj1832 LPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQP :::::.:::::::::::. ::::::.:::.::::::::: ::::.::.:::::::::.:: gi|149 LPELLRVSGVCKRWYRLSLDESLWQSLDLAGKNLHPDVTVRLLSRGVVAFRCPRSFMEQP 120 130 140 150 160 170 190 200 210 220 230 240 fj1832 LAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLV :.: :: :::::::::::::.::.::::::.::::::::::::.::::::.:::.: ::: gi|149 LGESFSSFRVQHMDLSNSVINVSNLHGILSECSKLQNLSLEGLQLSDPIVTTLAQNENLV 180 190 200 210 220 230 250 260 270 280 290 300 fj1832 RLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY :::: ::::::: :. ::::::::::::::::::::::::::.::::. .:.:::::::: gi|149 RLNLCGCSGFSESAVATLLSSCSRLDELNLSWCFDFTEKHVQAAVAHLPDTLTQLNLSGY 240 250 260 270 280 290 310 320 330 340 350 360 fj1832 RKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETL ::::::.:: ::..::::::.::::::.::::::: :::::::::::::::::::::::: gi|149 RKNLQKTDLCTLIKRCPNLVRLDLSDSIMLKNDCFPEFFQLNYLQHLSLSRCYDIIPETL 300 310 320 330 340 350 370 380 390 400 410 420 fj1832 LELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIK ::::::::::::::::::::::::::.::::.:::::..::.:::::. :::: :::::: gi|149 LELGEIPTLKTLQVFGIVPDGTLQLLREALPRLQINCAYFTSIARPTMDNKKNPEIWGIK 360 370 380 390 400 410 430 fj1832 CRLTLQKPSCL ::::::::: gi|149 CRLTLQKPSL 420 >>gi|37538008|sp|Q9Z0Z3|SKP2_MOUSE S-phase kinase-associ (424 aa) initn: 2510 init1: 2510 opt: 2510 Z-score: 2983.0 bits: 561.0 E(): 1.6e-157 Smith-Waterman score: 2510; 86.321% identity (95.991% similar) in 424 aa overlap (8-431:1-424) 10 20 30 40 50 60 fj1832 TPGPADAMHRKHLQEIPDLSSNVATSFTWGWDSSKTSELLSGMGVSALEKEEPDSENIPQ ::::::::::: :.::.:::::::::::::::::::::::::::: ::::::. gi|375 MHRKHLQEIPDQSGNVTTSFTWGWDSSKTSELLSGMGVSALEKEEVDSENIPH 10 20 30 40 50 70 80 90 100 110 120 fj1832 ELLSNLGHPESPPRKRLKSKGSDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGIFSCLC ::::::::.::::::.:.:::::::::.:::::.::::::::::::::::::::::::: gi|375 GLLSNLGHPQSPPRKRVKGKGSDKDFVIIRRPKLSRENFPGVSWDSLPDELLLGIFSCLC 60 70 80 90 100 110 130 140 150 160 170 180 fj1832 LPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQP :::::.:::::::::::. ::::::.:::.::::::::: ::::.::.:::::::::.:: gi|375 LPELLRVSGVCKRWYRLSLDESLWQSLDLAGKNLHPDVTVRLLSRGVVAFRCPRSFMEQP 120 130 140 150 160 170 190 200 210 220 230 240 fj1832 LAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLV :.: :: :::::::::::::.::.:: :::.::::::::::::.::::::.:::.: ::: gi|375 LGESFSSFRVQHMDLSNSVINVSNLHKILSECSKLQNLSLEGLQLSDPIVKTLAQNENLV 180 190 200 210 220 230 250 260 270 280 290 300 fj1832 RLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY :::: ::::::: :. ::::::::::::::::::::::::::.::::. .:::::::::: gi|375 RLNLCGCSGFSESAVATLLSSCSRLDELNLSWCFDFTEKHVQAAVAHLPNTITQLNLSGY 240 250 260 270 280 290 310 320 330 340 350 360 fj1832 RKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETL ::::::.:: :...:::::..::::::.::::::: :::::::::::::::::::::.:: gi|375 RKNLQKTDLCTIIKRCPNLIRLDLSDSIMLKNDCFPEFFQLNYLQHLSLSRCYDIIPDTL 300 310 320 330 340 350 370 380 390 400 410 420 fj1832 LELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIK :::::::::::::::::::.::::::.::::.:::::..::::::::. .::: :::::: gi|375 LELGEIPTLKTLQVFGIVPEGTLQLLREALPRLQINCAYFTTIARPTMDSKKNLEIWGIK 360 370 380 390 400 410 430 fj1832 CRLTLQKPSCL ::::::::::: gi|375 CRLTLQKPSCL 420 431 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Sun Aug 10 19:13:16 2008 done: Sun Aug 10 19:15:43 2008 Total Scan time: 837.090 Total Display time: 0.120 Function used was FASTA [version 34.26.5 April 26, 2007]