hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-19222326/chunk_1/iprscan-20080810-19222326.nocrc
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Query sequence: fj18325
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
PF00328.12.fs   Histidine acid phosphatase              180.8    3.2e-51   1
PF00328.12.ls   Histidine acid phosphatase               34.7    5.3e-10   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
PF00328.12.fs     1/1      91   307 ..     1   241 [.   180.8  3.2e-51
PF00328.12.ls     1/1      91   313 .]     1   402 []    34.7  5.3e-10

Alignments of top-scoring domains:
PF00328.12.fs: domain 1 of 1, from 91 to 307: score 180.8, E = 3.2e-51
                   *->eLefVqvvfRHGdRtPtkkypkdykaeidkllsakh......kqlal
                      +L++VqvvfRHG+R+P+k+ p +++ e++  l++  ++++ ++++++
     fj18325    91    KLKMVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPpqtqfdYTVTN 137  

                   alegklsflgdy.qlvptllqwplgwGqeLTpeGrqqafelGrylRqrYv
                     +g+++++ +++q+++t+l ++  +Gq LT+ G+qq+f+lG++lR++Yv
     fj18325   138 LAGGPKPYSPYDsQYHETTLKGGMFAGQ-LTKVGMQQMFALGERLRKNYV 186  

                   eqlgLlpdeynareevyirstdsdRtlaSAqaflaGlfppgglvdidndl
                   e+ ++l++ +n+ +ev+irst++ R l+S +++laGlf ++         
     fj18325   187 EDIPFLSPTFNP-QEVFIRSTNIFRNLESTRCLLAGLF-QCQ-------- 226  

                   ldwqpipvhtipeakkalanllll.ylnnsCpafeelqepllvekrvdee
                    +  pi +ht +     ++++l+++y   sC+   +       ++r++ +
     fj18325   227 -KEGPIIIHTDEA----DSEVLYPnY--QSCWSLRQ-------RTRGRRQ 262  

                   laklledylepiakrlnqlqllclpGetnltaddvwalldlclfetnkkd
                    a+l + ++e++  ++++       G ++ +  d + lld+ + e++ k+
     fj18325   263 TASLQPGISEDLK-KVKDR-----MGIDSSDKVDFFILLDNVAAEQE-KM 305  

                   gs<-*
                   gs   
     fj18325   306 GS    307  

PF00328.12.ls: domain 1 of 1, from 91 to 313: score 34.7, E = 5.3e-10
                   *->eLefVqvvfRHGdRtPtkkypkdykaeidkllsakh......kqlal
                      +L++VqvvfRHG+R+P+k+ p +++ e++  l++  ++++ ++++++
     fj18325    91    KLKMVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPpqtqfdYTVTN 137  

                   alegklsflgdy.qlvptllqwplgwGqeLTpeGrqqafelGrylRqrYv
                     +g+++++ +++q+++t+l ++  +Gq LT+ G+qq+f+lG++lR++Yv
     fj18325   138 LAGGPKPYSPYDsQYHETTLKGGMFAGQ-LTKVGMQQMFALGERLRKNYV 186  

                   eqlgLlpdeynareevyirstdsdRtlaSAqaflaGlfppgglvdidndl
                   e+ ++l++ +n+ +ev+irst++ R l+S +++laGlf ++         
     fj18325   187 EDIPFLSPTFNP-QEVFIRSTNIFRNLESTRCLLAGLF-QCQ-------- 226  

                   ldwqpipvhtipeakkalanllll.ylnnsCpafeelqepllvekrvdee
                    +  pi +ht +     ++++l+++y   sC+   +       ++r++ +
     fj18325   227 -KEGPIIIHTDEA----DSEVLYPnY--QSCWSLRQ-------RTRGRRQ 262  

                   laklledylepiakrlnqlqllclpGetnltaddvwalldlclfetnkkd
                    a+l + ++e++  ++++       G ++ +  d + lld+ + e++   
     fj18325   263 TASLQPGISEDLK-KVKDR-----MGIDSSDKVDFFILLDNVAAEQE--- 303  

                   gspfpdlftglkqyellhleyllldLeeyyglskLaDfvipQEYgigpel
                                                                     
     fj18325     - -------------------------------------------------- -    

                   akliGgpllnellkrltndlvadkTtnrtldsnpatfpldrklylyfaHD
                                     ++   +                          
     fj18325   304 ------------------KMGSCR-------------------------- 309  

                   ttiapllaaLreGlfddldldkpftdsyssseepPyaarlvfElyqcddg
                            +                                      +g
     fj18325   310 ---------F--------------------------------------HG 312  

                   katneyyVrvlyn<-*
                                   
     fj18325   313 S------------    313  

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