# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofj22623.fasta.nr -Q fj22623.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fj22623, 1163 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6841133 sequences Expectation_n fit: rho(ln(x))= 5.7793+/-0.000191; mu= 11.2285+/- 0.011 mean_var=88.0864+/-16.802, 0's: 38 Z-trim: 44 B-trim: 471 in 1/65 Lambda= 0.136653 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|168278142|dbj|BAG11049.1| nuclear receptor-inte (1158) 7539 1497.2 0 gi|9988061|sp|P48552|NRIP1_HUMAN Nuclear receptor- (1158) 7528 1495.1 0 gi|25955639|gb|AAH40361.1| Nuclear receptor intera (1158) 7520 1493.5 0 gi|60811768|gb|AAX36184.1| nuclear receptor intera (1159) 7520 1493.5 0 gi|123995373|gb|ABM85288.1| nuclear receptor inter (1158) 7516 1492.7 0 gi|158260595|dbj|BAF82475.1| unnamed protein produ (1158) 7495 1488.6 0 gi|55655866|ref|XP_531518.1| PREDICTED: nuclear re (1158) 7485 1486.6 0 gi|940539|emb|CAA59108.1| nuclear factor RIP140 [H (1158) 7478 1485.2 0 gi|109065766|ref|XP_001082131.1| PREDICTED: simila (1155) 7306 1451.3 0 gi|149742234|ref|XP_001500638.1| PREDICTED: nuclea (1155) 6821 1355.7 0 gi|119877633|ref|XP_603300.3| PREDICTED: similar t (1156) 6662 1324.3 0 gi|149059702|gb|EDM10585.1| RGD1563102 (predicted) (1162) 6492 1290.8 0 gi|81174957|sp|Q8CBD1|NRIP1_MOUSE Nuclear receptor (1161) 6451 1282.8 0 gi|3820494|gb|AAC69611.1| receptor interacting pro (1161) 6421 1276.8 0 gi|74220902|dbj|BAE33634.1| unnamed protein produc (1068) 5912 1176.5 0 gi|74001306|ref|XP_535560.2| PREDICTED: similar to (1166) 5465 1088.4 0 gi|50729866|ref|XP_425538.1| PREDICTED: similar to (1155) 5285 1052.9 0 gi|149637067|ref|XP_001510924.1| PREDICTED: simila (1163) 5118 1020.0 0 gi|124297537|gb|AAI31833.1| LOC100037834 protein [ (1138) 2582 520.0 2.7e-144 gi|39645073|gb|AAH63719.1| MGC68665 protein [Xenop (1135) 2568 517.2 1.8e-143 gi|125838185|ref|XP_001336737.1| PREDICTED: RIP140 (1080) 1445 295.8 7.7e-77 gi|125828075|ref|XP_001341770.1| PREDICTED: wu:fc7 (1053) 1081 224.0 3e-55 gi|126325183|ref|XP_001366289.1| PREDICTED: simila ( 998) 878 184.0 3.3e-43 gi|95113923|gb|ABF55512.1| receptor-interacting pr ( 133) 713 150.9 4.1e-34 gi|68132056|gb|AAY85294.1| RIP140-B [Danio rerio] ( 238) 437 96.6 1.6e-17 gi|68132058|gb|AAY85295.1| RIP140-A [Danio rerio] ( 247) 380 85.4 3.9e-14 gi|47206707|emb|CAF90378.1| unnamed protein produc ( 278) 333 76.2 2.6e-11 gi|81693597|sp|Q5HCP3|SRAP_STAAC Serine-rich adhes (2261) 242 58.9 3.5e-05 gi|168729456|ref|ZP_02761733.1| hypothetical prote (2265) 241 58.7 4e-05 gi|150375565|dbj|BAF68825.1| conserved hypothetica (2271) 241 58.7 4e-05 gi|123722336|sp|Q2FDK5|SRAP_STAA3 Serine-rich adhe (2271) 239 58.3 5.2e-05 gi|81704939|sp|Q7A362|SRAP_STAAN Serine-rich adhes (2271) 239 58.3 5.2e-05 gi|81648528|sp|Q6G620|SRAP_STAAS Serine-rich adhes (2275) 237 57.9 6.9e-05 gi|81761908|sp|Q8NUJ3|SRAP_STAAW Serine-rich adhes (2275) 237 57.9 6.9e-05 gi|89296260|gb|EAR94248.1| hypothetical protein TT (1206) 233 56.9 7.2e-05 gi|116102027|gb|ABJ67170.1| Subtilisin-like serine (2334) 219 54.3 0.00082 gi|75404754|sp|Q8VQ99|SRAP_STAAU Serine-rich adhes (2283) 209 52.4 0.0032 gi|34809533|gb|AAQ82687.1| Epa5p [Candida glabrata (1218) 203 51.0 0.0044 gi|49648653|emb|CAG80973.1| unnamed protein produc ( 498) 195 49.1 0.0064 >>gi|168278142|dbj|BAG11049.1| nuclear receptor-interact (1158 aa) initn: 7539 init1: 7539 opt: 7539 Z-score: 8027.3 bits: 1497.2 E(): 0 Smith-Waterman score: 7539; 100.000% identity (100.000% similar) in 1158 aa overlap (6-1163:1-1158) 10 20 30 40 50 60 fj2262 TLLLNMTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISG ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISG 10 20 30 40 50 70 80 90 100 110 120 fj2262 SAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 SAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEAL 60 70 80 90 100 110 130 140 150 160 170 180 fj2262 LAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDL 120 130 140 150 160 170 190 200 210 220 230 240 fj2262 RCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 RCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLS 180 190 200 210 220 230 250 260 270 280 290 300 fj2262 CAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 CAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAAS 240 250 260 270 280 290 310 320 330 340 350 360 fj2262 ERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 ERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPS 300 310 320 330 340 350 370 380 390 400 410 420 fj2262 SPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 SPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTID 360 370 380 390 400 410 430 440 450 460 470 480 fj2262 EYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 EYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKV 420 430 440 450 460 470 490 500 510 520 530 540 fj2262 PDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYA 480 490 500 510 520 530 550 560 570 580 590 600 fj2262 RTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 RTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTA 540 550 560 570 580 590 610 620 630 640 650 660 fj2262 SNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 SNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLL 600 610 620 630 640 650 670 680 690 700 710 720 fj2262 TGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 TGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQL 660 670 680 690 700 710 730 740 750 760 770 780 fj2262 LLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHD 720 730 740 750 760 770 790 800 810 820 830 840 fj2262 AKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 AKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDS 780 790 800 810 820 830 850 860 870 880 890 900 fj2262 DRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 DRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLL 840 850 860 870 880 890 910 920 930 940 950 960 fj2262 NQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 NQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSN 900 910 920 930 940 950 970 980 990 1000 1010 1020 fj2262 SVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 SVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFP 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 fj2262 EHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 EHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKG 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 1140 fj2262 GNSVTSRETQDKDIWREPSSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 GNSVTSRETQDKDIWREPSSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASR 1080 1090 1100 1110 1120 1130 1150 1160 fj2262 PHSANGEVYGLLGSVLTIKKESE ::::::::::::::::::::::: gi|168 PHSANGEVYGLLGSVLTIKKESE 1140 1150 >>gi|9988061|sp|P48552|NRIP1_HUMAN Nuclear receptor-inte (1158 aa) initn: 7528 init1: 7528 opt: 7528 Z-score: 8015.5 bits: 1495.1 E(): 0 Smith-Waterman score: 7528; 99.914% identity (99.914% similar) in 1158 aa overlap (6-1163:1-1158) 10 20 30 40 50 60 fj2262 TLLLNMTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISG ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|998 MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISG 10 20 30 40 50 70 80 90 100 110 120 fj2262 SAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|998 SAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEAL 60 70 80 90 100 110 130 140 150 160 170 180 fj2262 LAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|998 LAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDL 120 130 140 150 160 170 190 200 210 220 230 240 fj2262 RCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|998 RCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLS 180 190 200 210 220 230 250 260 270 280 290 300 fj2262 CAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|998 CAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAAS 240 250 260 270 280 290 310 320 330 340 350 360 fj2262 ERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|998 ERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPS 300 310 320 330 340 350 370 380 390 400 410 420 fj2262 SPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|998 SPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTID 360 370 380 390 400 410 430 440 450 460 470 480 fj2262 EYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|998 EYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKV 420 430 440 450 460 470 490 500 510 520 530 540 fj2262 PDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|998 PDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYA 480 490 500 510 520 530 550 560 570 580 590 600 fj2262 RTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|998 RTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTA 540 550 560 570 580 590 610 620 630 640 650 660 fj2262 SNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|998 SNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLL 600 610 620 630 640 650 670 680 690 700 710 720 fj2262 TGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|998 TGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQL 660 670 680 690 700 710 730 740 750 760 770 780 fj2262 LLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|998 LLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHD 720 730 740 750 760 770 790 800 810 820 830 840 fj2262 AKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|998 AKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDS 780 790 800 810 820 830 850 860 870 880 890 900 fj2262 DRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|998 DRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLL 840 850 860 870 880 890 910 920 930 940 950 960 fj2262 NQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|998 NQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSN 900 910 920 930 940 950 970 980 990 1000 1010 1020 fj2262 SVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|998 SVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFP 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 fj2262 EHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|998 EHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKG 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 1140 fj2262 GNSVTSRETQDKDIWREPSSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASR ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: gi|998 GNSVTSRETQDKDIWREASSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASR 1080 1090 1100 1110 1120 1130 1150 1160 fj2262 PHSANGEVYGLLGSVLTIKKESE ::::::::::::::::::::::: gi|998 PHSANGEVYGLLGSVLTIKKESE 1140 1150 >>gi|25955639|gb|AAH40361.1| Nuclear receptor interactin (1158 aa) initn: 7520 init1: 7520 opt: 7520 Z-score: 8007.0 bits: 1493.5 E(): 0 Smith-Waterman score: 7520; 99.827% identity (99.827% similar) in 1158 aa overlap (6-1163:1-1158) 10 20 30 40 50 60 fj2262 TLLLNMTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISG ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISG 10 20 30 40 50 70 80 90 100 110 120 fj2262 SAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 SAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEAL 60 70 80 90 100 110 130 140 150 160 170 180 fj2262 LAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 LAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDL 120 130 140 150 160 170 190 200 210 220 230 240 fj2262 RCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 RCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLS 180 190 200 210 220 230 250 260 270 280 290 300 fj2262 CAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 CAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAAS 240 250 260 270 280 290 310 320 330 340 350 360 fj2262 ERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 ERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPS 300 310 320 330 340 350 370 380 390 400 410 420 fj2262 SPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 SPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTID 360 370 380 390 400 410 430 440 450 460 470 480 fj2262 EYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 EYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKV 420 430 440 450 460 470 490 500 510 520 530 540 fj2262 PDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 PDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYA 480 490 500 510 520 530 550 560 570 580 590 600 fj2262 RTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 RTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTA 540 550 560 570 580 590 610 620 630 640 650 660 fj2262 SNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 SNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLL 600 610 620 630 640 650 670 680 690 700 710 720 fj2262 TGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 TGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQL 660 670 680 690 700 710 730 740 750 760 770 780 fj2262 LLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 LLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHD 720 730 740 750 760 770 790 800 810 820 830 840 fj2262 AKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 AKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDS 780 790 800 810 820 830 850 860 870 880 890 900 fj2262 DRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 DRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLL 840 850 860 870 880 890 910 920 930 940 950 960 fj2262 NQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|259 NQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRIN 900 910 920 930 940 950 970 980 990 1000 1010 1020 fj2262 SVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 SVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFP 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 fj2262 EHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 EHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKG 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 1140 fj2262 GNSVTSRETQDKDIWREPSSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASR ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: gi|259 GNSVTSRETQDKDIWREASSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASR 1080 1090 1100 1110 1120 1130 1150 1160 fj2262 PHSANGEVYGLLGSVLTIKKESE ::::::::::::::::::::::: gi|259 PHSANGEVYGLLGSVLTIKKESE 1140 1150 >>gi|60811768|gb|AAX36184.1| nuclear receptor interactin (1159 aa) initn: 7520 init1: 7520 opt: 7520 Z-score: 8007.0 bits: 1493.5 E(): 0 Smith-Waterman score: 7520; 99.827% identity (99.827% similar) in 1158 aa overlap (6-1163:1-1158) 10 20 30 40 50 60 fj2262 TLLLNMTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISG ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISG 10 20 30 40 50 70 80 90 100 110 120 fj2262 SAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 SAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEAL 60 70 80 90 100 110 130 140 150 160 170 180 fj2262 LAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 LAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDL 120 130 140 150 160 170 190 200 210 220 230 240 fj2262 RCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 RCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLS 180 190 200 210 220 230 250 260 270 280 290 300 fj2262 CAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 CAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAAS 240 250 260 270 280 290 310 320 330 340 350 360 fj2262 ERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 ERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPS 300 310 320 330 340 350 370 380 390 400 410 420 fj2262 SPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 SPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTID 360 370 380 390 400 410 430 440 450 460 470 480 fj2262 EYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 EYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKV 420 430 440 450 460 470 490 500 510 520 530 540 fj2262 PDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 PDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYA 480 490 500 510 520 530 550 560 570 580 590 600 fj2262 RTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 RTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTA 540 550 560 570 580 590 610 620 630 640 650 660 fj2262 SNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 SNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLL 600 610 620 630 640 650 670 680 690 700 710 720 fj2262 TGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 TGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQL 660 670 680 690 700 710 730 740 750 760 770 780 fj2262 LLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 LLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHD 720 730 740 750 760 770 790 800 810 820 830 840 fj2262 AKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 AKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDS 780 790 800 810 820 830 850 860 870 880 890 900 fj2262 DRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 DRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLL 840 850 860 870 880 890 910 920 930 940 950 960 fj2262 NQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|608 NQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRIN 900 910 920 930 940 950 970 980 990 1000 1010 1020 fj2262 SVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 SVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFP 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 fj2262 EHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 EHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKG 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 1140 fj2262 GNSVTSRETQDKDIWREPSSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASR ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: gi|608 GNSVTSRETQDKDIWREASSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASR 1080 1090 1100 1110 1120 1130 1150 1160 fj2262 PHSANGEVYGLLGSVLTIKKESE ::::::::::::::::::::::: gi|608 PHSANGEVYGLLGSVLTIKKESEL 1140 1150 >>gi|123995373|gb|ABM85288.1| nuclear receptor interacti (1158 aa) initn: 7516 init1: 7516 opt: 7516 Z-score: 8002.7 bits: 1492.7 E(): 0 Smith-Waterman score: 7516; 99.741% identity (99.827% similar) in 1158 aa overlap (6-1163:1-1158) 10 20 30 40 50 60 fj2262 TLLLNMTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISG ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISG 10 20 30 40 50 70 80 90 100 110 120 fj2262 SAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|123 SAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKDAL 60 70 80 90 100 110 130 140 150 160 170 180 fj2262 LAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDL 120 130 140 150 160 170 190 200 210 220 230 240 fj2262 RCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 RCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLS 180 190 200 210 220 230 250 260 270 280 290 300 fj2262 CAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 CAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAAS 240 250 260 270 280 290 310 320 330 340 350 360 fj2262 ERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 ERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPS 300 310 320 330 340 350 370 380 390 400 410 420 fj2262 SPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 SPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTID 360 370 380 390 400 410 430 440 450 460 470 480 fj2262 EYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 EYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKV 420 430 440 450 460 470 490 500 510 520 530 540 fj2262 PDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 PDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYA 480 490 500 510 520 530 550 560 570 580 590 600 fj2262 RTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 RTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTA 540 550 560 570 580 590 610 620 630 640 650 660 fj2262 SNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 SNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLL 600 610 620 630 640 650 670 680 690 700 710 720 fj2262 TGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 TGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQL 660 670 680 690 700 710 730 740 750 760 770 780 fj2262 LLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHD 720 730 740 750 760 770 790 800 810 820 830 840 fj2262 AKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 AKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDS 780 790 800 810 820 830 850 860 870 880 890 900 fj2262 DRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 DRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLL 840 850 860 870 880 890 910 920 930 940 950 960 fj2262 NQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|123 NQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRIN 900 910 920 930 940 950 970 980 990 1000 1010 1020 fj2262 SVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 SVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFP 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 fj2262 EHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 EHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKG 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 1140 fj2262 GNSVTSRETQDKDIWREPSSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASR ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: gi|123 GNSVTSRETQDKDIWREASSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASR 1080 1090 1100 1110 1120 1130 1150 1160 fj2262 PHSANGEVYGLLGSVLTIKKESE ::::::::::::::::::::::: gi|123 PHSANGEVYGLLGSVLTIKKESE 1140 1150 >>gi|158260595|dbj|BAF82475.1| unnamed protein product [ (1158 aa) initn: 7495 init1: 7495 opt: 7495 Z-score: 7980.4 bits: 1488.6 E(): 0 Smith-Waterman score: 7495; 99.655% identity (99.655% similar) in 1158 aa overlap (6-1163:1-1158) 10 20 30 40 50 60 fj2262 TLLLNMTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISG ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISG 10 20 30 40 50 70 80 90 100 110 120 fj2262 SAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEAL ::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 SAFPTCQSNVPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEAL 60 70 80 90 100 110 130 140 150 160 170 180 fj2262 LAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 LAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDL 120 130 140 150 160 170 190 200 210 220 230 240 fj2262 RCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 RCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLS 180 190 200 210 220 230 250 260 270 280 290 300 fj2262 CAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 CAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAAS 240 250 260 270 280 290 310 320 330 340 350 360 fj2262 ERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 ERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPS 300 310 320 330 340 350 370 380 390 400 410 420 fj2262 SPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 SPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTID 360 370 380 390 400 410 430 440 450 460 470 480 fj2262 EYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKV :::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: gi|158 EYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHGTEKSESDQPVSLDNFTQSLLNTWDPKV 420 430 440 450 460 470 490 500 510 520 530 540 fj2262 PDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 PDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYA 480 490 500 510 520 530 550 560 570 580 590 600 fj2262 RTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 RTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTA 540 550 560 570 580 590 610 620 630 640 650 660 fj2262 SNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 SNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLL 600 610 620 630 640 650 670 680 690 700 710 720 fj2262 TGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 TGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQL 660 670 680 690 700 710 730 740 750 760 770 780 fj2262 LLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 LLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHD 720 730 740 750 760 770 790 800 810 820 830 840 fj2262 AKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 AKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDS 780 790 800 810 820 830 850 860 870 880 890 900 fj2262 DRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 DRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLL 840 850 860 870 880 890 910 920 930 940 950 960 fj2262 NQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 NQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSN 900 910 920 930 940 950 970 980 990 1000 1010 1020 fj2262 SVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 SVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFP 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 fj2262 EHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 EHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKG 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 1140 fj2262 GNSVTSRETQDKDIWREPSSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASR ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: gi|158 GNSVTSRETQDKDIWREASSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASC 1080 1090 1100 1110 1120 1130 1150 1160 fj2262 PHSANGEVYGLLGSVLTIKKESE ::::::::::::::::::::::: gi|158 PHSANGEVYGLLGSVLTIKKESE 1140 1150 >>gi|55655866|ref|XP_531518.1| PREDICTED: nuclear recept (1158 aa) initn: 7485 init1: 7485 opt: 7485 Z-score: 7969.7 bits: 1486.6 E(): 0 Smith-Waterman score: 7485; 99.136% identity (99.914% similar) in 1158 aa overlap (6-1163:1-1158) 10 20 30 40 50 60 fj2262 TLLLNMTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISG ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISG 10 20 30 40 50 70 80 90 100 110 120 fj2262 SAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEAL ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|556 SAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIVNLNVKKEAL 60 70 80 90 100 110 130 140 150 160 170 180 fj2262 LAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 LAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDL 120 130 140 150 160 170 190 200 210 220 230 240 fj2262 RCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 RCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLS 180 190 200 210 220 230 250 260 270 280 290 300 fj2262 CAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 CAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAAS 240 250 260 270 280 290 310 320 330 340 350 360 fj2262 ERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPS :::::::::::::::::::.:::::.:.:::::::::::::::::::::::::::::::: gi|556 ERLAAMARLQENGQKDVGSFQLPKGVSGHLNGQARTSSSKLMASKSSATVFQNPMGIIPS 300 310 320 330 340 350 370 380 390 400 410 420 fj2262 SPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 SPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTID 360 370 380 390 400 410 430 440 450 460 470 480 fj2262 EYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 EYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKV 420 430 440 450 460 470 490 500 510 520 530 540 fj2262 PDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 PDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYA 480 490 500 510 520 530 550 560 570 580 590 600 fj2262 RTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTA ::::::::.::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|556 RTSVIESPGTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYACSTQSEKLTNTA 540 550 560 570 580 590 610 620 630 640 650 660 fj2262 SNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 SNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLL 600 610 620 630 640 650 670 680 690 700 710 720 fj2262 TGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQL ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|556 TGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFTSQPTGPEPGLSGSEIENLLERRTVLQL 660 670 680 690 700 710 730 740 750 760 770 780 fj2262 LLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHD :::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 LLGNSNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHD 720 730 740 750 760 770 790 800 810 820 830 840 fj2262 AKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 AKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDS 780 790 800 810 820 830 850 860 870 880 890 900 fj2262 DRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 DRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLL 840 850 860 870 880 890 910 920 930 940 950 960 fj2262 NQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 NQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSN 900 910 920 930 940 950 970 980 990 1000 1010 1020 fj2262 SVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 SVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFP 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 fj2262 EHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 EHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKG 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 1140 fj2262 GNSVTSRETQDKDIWREPSSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASR ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|556 GNSVTSRETQDKDIWREPSSAESVSQVTVKEELLPTAETKASFFNLRSPYNSHMGNNASR 1080 1090 1100 1110 1120 1130 1150 1160 fj2262 PHSANGEVYGLLGSVLTIKKESE :::::::::::::.::::::::: gi|556 PHSANGEVYGLLGNVLTIKKESE 1140 1150 >>gi|940539|emb|CAA59108.1| nuclear factor RIP140 [Homo (1158 aa) initn: 7478 init1: 7478 opt: 7478 Z-score: 7962.3 bits: 1485.2 E(): 0 Smith-Waterman score: 7478; 99.309% identity (99.655% similar) in 1158 aa overlap (6-1163:1-1158) 10 20 30 40 50 60 fj2262 TLLLNMTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISG ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|940 MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISG 10 20 30 40 50 70 80 90 100 110 120 fj2262 SAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|940 SAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEAL 60 70 80 90 100 110 130 140 150 160 170 180 fj2262 LAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDL :::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|940 LAGMVDSVRKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDL 120 130 140 150 160 170 190 200 210 220 230 240 fj2262 RCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|940 RCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLS 180 190 200 210 220 230 250 260 270 280 290 300 fj2262 CAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|940 CAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAAS 240 250 260 270 280 290 310 320 330 340 350 360 fj2262 ERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|940 ERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPS 300 310 320 330 340 350 370 380 390 400 410 420 fj2262 SPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|940 SPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTID 360 370 380 390 400 410 430 440 450 460 470 480 fj2262 EYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKV :::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: gi|940 EYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHGTEKSESDQPVSLDNFTQSLLNTWDPKV 420 430 440 450 460 470 490 500 510 520 530 540 fj2262 PDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|940 PDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYA 480 490 500 510 520 530 550 560 570 580 590 600 fj2262 RTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|940 RTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTA 540 550 560 570 580 590 610 620 630 640 650 660 fj2262 SNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|940 SNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLL 600 610 620 630 640 650 670 680 690 700 710 720 fj2262 TGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|940 TGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQL 660 670 680 690 700 710 730 740 750 760 770 780 fj2262 LLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHD :::::.::. .::::::::::::::::::::::::::::::::::::::::::::::::: gi|940 LLGNPTKGRVKKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHD 720 730 740 750 760 770 790 800 810 820 830 840 fj2262 AKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|940 AKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDS 780 790 800 810 820 830 850 860 870 880 890 900 fj2262 DRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|940 DRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLL 840 850 860 870 880 890 910 920 930 940 950 960 fj2262 NQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|940 NQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSN 900 910 920 930 940 950 970 980 990 1000 1010 1020 fj2262 SVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|940 SVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFP 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 fj2262 EHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|940 EHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKG 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 1140 fj2262 GNSVTSRETQDKDIWREPSSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASR ::::.:::::::::::: :::::::::::::::::::::::::::::::::::::::::: gi|940 GNSVASRETQDKDIWREASSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASR 1080 1090 1100 1110 1120 1130 1150 1160 fj2262 PHSANGEVYGLLGSVLTIKKESE ::::::::::::::::::::::: gi|940 PHSANGEVYGLLGSVLTIKKESE 1140 1150 >>gi|109065766|ref|XP_001082131.1| PREDICTED: similar to (1155 aa) initn: 3733 init1: 3733 opt: 7306 Z-score: 7779.0 bits: 1451.3 E(): 0 Smith-Waterman score: 7306; 96.891% identity (99.050% similar) in 1158 aa overlap (6-1163:1-1155) 10 20 30 40 50 60 fj2262 TLLLNMTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISG :::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|109 MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGNNEEDQNFNISG 10 20 30 40 50 70 80 90 100 110 120 fj2262 SAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEAL ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|109 SAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIVNLNVKKEAL 60 70 80 90 100 110 130 140 150 160 170 180 fj2262 LAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDL 120 130 140 150 160 170 190 200 210 220 230 240 fj2262 RCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLS ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|109 RCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFVESPHHVGQSGTKVMSEPLS 180 190 200 210 220 230 250 260 270 280 290 300 fj2262 CAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 CAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAAS 240 250 260 270 280 290 310 320 330 340 350 360 fj2262 ERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPS :::::::::::::::::::.:: :.::::::::::::::::::::::::.:::::::::: gi|109 ERLAAMARLQENGQKDVGSFQLSKAMSSHLNGQARTSSSKLMASKSSATTFQNPMGIIPS 300 310 320 330 340 350 370 380 390 400 410 420 fj2262 SPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTID 360 370 380 390 400 410 430 440 450 460 470 480 fj2262 EYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKV :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|109 EYSDNNPSFTDDSSGDESSYSSCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKV 420 430 440 450 460 470 490 500 510 520 530 540 fj2262 PDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYA :::::::::::::::::::::::::::::::::::::::::::::::::::.::.::::: gi|109 PDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVTKFSTQNYA 480 490 500 510 520 530 550 560 570 580 590 600 fj2262 RTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTA ::::::::::::::::::::::::.:: :::::::::::::::::::.::::::: :: gi|109 RTSVIESPSTNRTTPVSTPPLLTSAKAESPINLSQHSLVIKWNSPPYACSTQSEK---TA 540 550 560 570 580 590 610 620 630 640 650 660 fj2262 SNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLL :::::::::::: ::::::::::::::::::::::::::::::.:::::::::::::::: gi|109 SNHSMDLTKSKDTPGEKPAQNEGAQNSATFSASKLLQNLAQCGLQSSMSVEEQRPSKQLL 600 610 620 630 640 650 670 680 690 700 710 720 fj2262 TGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQL : :::: ::.:::::::::.:::::.::..:::::::::::::::::::::::::::::: gi|109 TVNTDKLIGVIDRLNSPLLANKTNAAEESQAFSSQPTGPEPGLSGSEIENLLERRTVLQL 660 670 680 690 700 710 730 740 750 760 770 780 fj2262 LLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHD :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LLGNPNKGKNEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHD 720 730 740 750 760 770 790 800 810 820 830 840 fj2262 AKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDS ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|109 AKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNPDSYLADDS 780 790 800 810 820 830 850 860 870 880 890 900 fj2262 DRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLL :.:::.:::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|109 DKSHRSNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNVVDAANNHSAPEVLYGSLL 840 850 860 870 880 890 910 920 930 940 950 960 fj2262 NQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSN 900 910 920 930 940 950 970 980 990 1000 1010 1020 fj2262 SVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFP :::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: gi|109 SVADSKKKGHKNNVTNSKPEFSISSLNGLMYSPTQPSSCMDNRTFSYPGVVKTPVSPTFP 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 fj2262 EHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKG :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|109 EHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDVEKNEYEKDSPRLTKTNPILYYMLQKG 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 1140 fj2262 GNSVTSRETQDKDIWREPSSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASR :::::::::::::::::::::::::::: ::::::::::.:.:::::::::::::::::: gi|109 GNSVTSRETQDKDIWREPSSAESVSQVTIKEELLPTAETRAAFFNLRSPYNSHMGNNASR 1080 1090 1100 1110 1120 1130 1150 1160 fj2262 PHSANGEVYGLLGSVLTIKKESE :::::::::::::.::::::::: gi|109 PHSANGEVYGLLGNVLTIKKESE 1140 1150 >>gi|149742234|ref|XP_001500638.1| PREDICTED: nuclear re (1155 aa) initn: 4769 init1: 4769 opt: 6821 Z-score: 7262.3 bits: 1355.7 E(): 0 Smith-Waterman score: 6821; 90.242% identity (96.373% similar) in 1158 aa overlap (6-1163:1-1155) 10 20 30 40 50 60 fj2262 TLLLNMTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISG :::::::::::::::.:::::::::::::: ::::::::::::.::::::::.:. gi|149 MTHGEELGSDVHQDSVVLTYLEGLLMHQAAEGSGTAVDKKSAGRNEEDQNFNVSS 10 20 30 40 50 70 80 90 100 110 120 fj2262 SAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEAL .::::::::::::::.:::::::::::::::::::::::::::::::: :.:.::::::: gi|149 KAFPTCQSNGPVLNTQTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDPIVNINVKKEAL 60 70 80 90 100 110 130 140 150 160 170 180 fj2262 LAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDL ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LAGMVDNVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDL 120 130 140 150 160 170 190 200 210 220 230 240 fj2262 RCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLS ::::::::::::::::::.:::::::.::::::::::.::.::::::::::::::::::: gi|149 RCYGVASSHLKTLLKKSKAKDQKPDTDLPDVTKNLIRERFVESPHHVGQSGTKVMSEPLS 180 190 200 210 220 230 250 260 270 280 290 300 fj2262 CAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 CAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAAS 240 250 260 270 280 290 310 320 330 340 350 360 fj2262 ERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPS :::::::::::::::::::.:: :::::::::::::::::::::.:. ::: :::.:: gi|149 ERLAAMARLQENGQKDVGSFQLSKGMSSHLNGQARTSSSKLMASRST---FQNAMGIVPS 300 310 320 330 340 350 370 380 390 400 410 420 fj2262 SPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTID :::::: :::::::::::.::::::::::::::::::::::.:::::::::.::::::.: gi|149 SPKNAGCKNSLERNNIKQVANNSLLLHLLKSQTIPKPMNGHNHSERGSIFEDSSTPTTVD 360 370 380 390 400 410 430 440 450 460 470 480 fj2262 EYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKV :::::::::::::::::::::::::::::::::::: : ::::::::.:::::::::::. gi|149 EYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKPEPDQPVSLDNLTQSLLNTWDPKA 420 430 440 450 460 470 490 500 510 520 530 540 fj2262 PDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYA ::: ::: ::::::::::::::::::::::::::::.:.:.::: ::.::.::.::::. gi|149 RDVDSKEDPDTSKNSKLNSHQKVTLLQLLLGHKNEENTERNNSPQEVHSDVTKFSTQNYT 480 490 500 510 520 530 550 560 570 580 590 600 fj2262 RTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTA ::::::::::::::::::::::.:.:: :::::::::::::::::::.::.: :: .::: gi|149 RTSVIESPSTNRTTPVSTPPLLASTKAESPINLSQHSLVIKWNSPPYACSSQPEKPANTA 540 550 560 570 580 590 610 620 630 640 650 660 fj2262 SNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLL ::: :::::::. :::::::::::: :::::::::::::::::::: : :::::::::: gi|149 SNHLMDLTKSKESQGEKPAQNEGAQNPATFSASKLLQNLAQCGMQSSASGEEQRPSKQLL 600 610 620 630 640 650 670 680 690 700 710 720 fj2262 TGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQL :::::.::::::::::::::::::::::::::: : :::::::::::::::::::::: gi|149 GVNTDKPVGMIDRLNSPLLSNKTNAVEENKAFSSQATCPEPGLSGSEIENLLERRTVLQL 660 670 680 690 700 710 730 740 750 760 770 780 fj2262 LLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHD :::::::::::::::. :::::::::..:::.::::::::::::::::.: ::::::::: gi|149 LLGNPNKGKSEKKEKNLLRDESTQEHTDRALNEQILMVKIKSEPCDDLHIHNTNVHLSHD 720 730 740 750 760 770 790 800 810 820 830 840 fj2262 AKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDS ::.:::::::: ::::: :::.::::::::.:::::::::::::::::::::.:::::: gi|149 AKGAPFLGMAPPVQRSAAALPASEDFKSEPISPQDFSFSKNGLLSRLLRQNQESYLADDL 780 790 800 810 820 830 850 860 870 880 890 900 fj2262 DRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLL : : ::....:.:::::::::::::::::::::::::::::.:::.:.::::.::::::: gi|149 DNSPRNSQLTLVESKNLCMVPKKRKLYTEPLENPFKKMKNNLVDATNSHSAPDVLYGSLL 840 850 860 870 880 890 910 920 930 940 950 960 fj2262 NQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSN ::.:::::::::::::::.:::::::::::::::::::::::::::::::::::: : :: gi|149 NQQELKFSRNDLEFKYPASHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSQHGSN 900 910 920 930 940 950 970 980 990 1000 1010 1020 fj2262 SVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFP ::.::::::::::: .:::::::::::::::.::::..:.::::: ::::::: .:: :: gi|149 SVVDSKKKGHKNNVPSSKPEFSISSLNGLMYGSTQPNACVDNRTFPYPGVVKTALSPPFP 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 fj2262 EHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKG :.:::::::::::::::::::::::::::::::..::::::::::::::::::::::::: gi|149 EYLGCAGSRPESGLLNGCSMPSEKGPIKWVITDGDKNEYEKDSPRLTKTNPILYYMLQKG 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 1140 fj2262 GNSVTSRETQDKDIWREPSSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASR ::::::::::.::.:::::::.:::::: ::::::.:::::::::::::::::::::::: gi|149 GNSVTSRETQSKDMWREPSSADSVSQVTIKEELLPAAETKASFFNLRSPYNSHMGNNASR 1080 1090 1100 1110 1120 1130 1150 1160 fj2262 PHSANGEVYGLLGSVLTIKKESE ::::::: ::::::::::::::: gi|149 PHSANGEGYGLLGSVLTIKKESE 1140 1150 1163 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Sun Aug 10 20:53:47 2008 done: Sun Aug 10 20:56:02 2008 Total Scan time: 1150.140 Total Display time: 0.860 Function used was FASTA [version 34.26.5 April 26, 2007]