hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-22130875/chunk_1/iprscan-20080810-22130875.nocrc
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Query sequence: fk00731
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TIGR00877 purD: phosphoribosylamine--glycine ligase      985.8   5.1e-294   1
TIGR00878 purM: phosphoribosylformylglycinamidine cycl   592.9     1e-175   1
TIGR00639 PurN: phosphoribosylglycinamide formyltransf   303.3    1.5e-88   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TIGR00877   1/1      39   463 ..     1   459 []   985.8 5.1e-294
TIGR00878   1/1     471   805 ..     1   338 []   592.9   1e-175
TIGR00639   1/1     844  1035 ..     1   215 []   303.3  1.5e-88

Alignments of top-scoring domains:
TIGR00877: domain 1 of 1, from 39 to 463: score 985.8, E = 5.1e-294
                   *->MkVLViGnGGREHALAwkLaqSplVkyvyvapGNaGtarlaknknva
                       +VL+iG+GGREH+LAwkLaqS++Vk+v+vapGNaGta+ +k++n+a
     fk00731    39    ARVLIIGSGGREHTLAWKLAQSHHVKQVLVAPGNAGTACSEKISNTA 85   

                   ieitkdvrdiealveFAkkkkidLaviGPEaPLvlGlVDaLeeaGIpvFG
                   i+i+    d++al++F+k+kki+++v+GPEaPL++G+V++L++aG+++FG
     fk00731    86 ISIS----DHTALAQFCKEKKIEFVVVGPEAPLAAGIVGNLRSAGVQCFG 131  

                   PtKeAAqLEaSKaFaKdFmkrygIPGTAeYevFtdpeEAksYiqekgaPA
                   Pt+eAAqLE+SK+FaK+Fm+r+gIP TA++++Ft+peEA+s+i ++++PA
     fk00731   132 PTAEAAQLESSKRFAKEFMDRHGIP-TAQWKAFTKPEEACSFILSADFPA 180  

                   eiVVKAdGLAAGKGViVaGeqLktnEEAikaveeileqkaFGeagerVVI
                    +VVKA+GLAAGKGViVa    k++EEA+kav+ei+++kaFG+age++VI
     fk00731   181 -LVVKASGLAAGKGVIVA----KSKEEACKAVQEIMQEKAFGAAGETIVI 225  

                   EEfLeGeEvSllafvDGktviPlppaQDHKRalEGDkkGpNTGGMGAYSP
                   EE L+GeEvS+l+f+DGktv+P+ppaQDHKR+lEGD  GpNTGGMGAY+P
     fk00731   226 EELLDGEEVSCLCFTDGKTVAPMPPAQDHKRLLEGDG-GPNTGGMGAYCP 274  

                   aPhlLvfteevekriaeeIvePTvkalrkEGtpYkGvLYaglMLtkeGgv
                   aP   +++++++ +i+++++++Tv+++++EGtpY+G+LYag+MLtk+G  
     fk00731   275 AP---QVSNDLLLKIKDTVLQRTVDGMQQEGTPYTGILYAGIMLTKNG-- 319  

                   LvPkVlEfNvRFGDPEtQavLplLkDqSDLlEvclaavegkLdDsevelr
                     PkVlEfN+RFGDPE+Q++LplLk  SDL+Ev++++++g L+ ++++++
     fk00731   320 --PKVLEFNCRFGDPECQVILPLLK--SDLYEVIQSTLDGLLC-TSLPVW 364  

                   fdnraaVtVVlAsGALKGReylkeGYPedyrkGdpItGdeeeaeaegvkv
                    +n++a+tVV+As          +GYP+dy+kG +ItG ++ea+a g +v
     fk00731   365 LENHTALTVVMAS----------KGYPGDYTKGVEITG-FPEAQALGLEV 403  

                   fhAGtkteqdnGklvTnGGRVLaVvalgkdLeeArerAYeavekIkfeGm
                   fhAG  t+++nGk+vT+GGRVLaV+a++++L++A e+A++++++IkfeG+
     fk00731   404 FHAG--TALKNGKVVTHGGRVLAVTAIRENLISALEEAKKGLAAIKFEGA 451  

                   fYRkDIGlRAle<-*
                   +YRkDIG+RA++   
     fk00731   452 IYRKDIGFRAIA    463  

TIGR00878: domain 1 of 1, from 471 to 805: score 592.9, E = 1e-175
                   *->vTYadAGVDIeagneaVkriksAARRrlvkktrrpgvmgglGGFAGl
                      +TY+++GVDI agn +Vk i +     l+k t+r g   +lGGFAGl
     fk00731   471    LTYKESGVDIAAGNMLVKKIQP-----LAKATSRSGCKVDLGGFAGL 512  

                   fdlgdk.YkepvLvsgTDGVGTKLkvAeamdkHDTiGIDlVAMnVNDLlv
                   fdl++++ k+p+L+sgTDGVGTKLk+A+  +kHDTiG+DlVAM+VND+l+
     fk00731   513 FDLKAAgFKDPLLASGTDGVGTKLKIAQLCNKHDTIGQDLVAMCVNDILA 562  

                   qGAEPLffLDYlAvGklDpevasqIvkGiaeGCkqaGcALvGGETAeMPG
                   qGAEPLffLDY+  GklD+ v +++v+Gia+ C  aGcAL+GGETAeMP+
     fk00731   563 QGAEPLFFLDYFSCGKLDLSVTEAVVAGIAKACGKAGCALLGGETAEMPD 612  

                   lyrggeYDlAGTaVGvVEkDeIitGe.kvkpGDvlIGLgSSGiHSNGlSL
                   +y++geYDlAG+aVG+ E+D+ ++  +++ +GDv++G++SSG+HSNG+SL
     fk00731   613 MYPPGEYDLAGFAVGAMERDQKLPHLeRITEGDVVVGIASSGLHSNGFSL 662  

                   vRKVlednaal.dyedtveeeGKtLGEeLLePTRIYVKpiLaliksekeV
                   vRK++  +  + +++  ++ +++tLG+ LL+PTRIY  ++L++++s+  V
     fk00731   663 VRKIVAKSSLQySSPAPDGCGDQTLGDLLLTPTRIYSHSLLPVLRSGH-V 711  

                   hGlAHITGGGlleNllRrLpdglkaviDkgswpqppiFkwIqelGnVeee
                   +++AHITGGGlleN++R+Lp++l+  +D+ +w +p++F+w+q+ G ++ee
     fk00731   712 KAFAHITGGGLLENIPRVLPEKLGVDLDAQTWRIPRVFSWLQQEGHLSEE 761  

                   EMfRTFNMGVGFvviVpeEevdkalalLeekgekawviGeVikg<-*
                   EM RTFN+GVG v++V++E+++  l  + ++ e+awviG+V+++   
     fk00731   762 EMARTFNCGVGAVLVVSKEQTEQILRDIQQHKEEAWVIGSVVAR    805  

TIGR00639: domain 1 of 1, from 844 to 1035: score 303.3, E = 1.5e-88
                   *->krivVLiSGsGSNLqAIIDAikegqgkidAsvvlVIsnkpkAygleR
                      +r++VLiSG+GSNLqA+ID ++e   +  A +  VIsnk+ + gl  
     fk00731   844    ARVAVLISGTGSNLQALIDSTRE--PNSSAQIDIVISNKAAVAGLDK 888  

                   AaqagIPtkvlslkdfdsGiAKEDKAARAKAReafDqaiaeelkaaeVDL
                   A++agIPt+v+++k + +             R +fD ai   l +   D 
     fk00731   889 AERAGIPTRVINHKLYKN-------------RVEFDSAIDLVLEEFSIDI 925  

                   vvlAGfMRILgptFLsafagrPiLNIHPSLLPaFpGTlhaveqAleaGvk
                   v+lAGfMRIL+ +F++ + g+  LNIHPSLLP+F G  +a+eqAle Gv 
     fk00731   926 VCLAGFMRILSGPFVQKWNGK-MLNIHPSLLPSFKG-SNAHEQALETGVT 973  

                   eNKPLTsGcTVHyVdEeVDtGPIivQakVPIlpGeDteEtleqRIhkqEH
                   +     +GcTVH+V E VD+G Ii+Q +VP+   +Dt  tl +R++ +EH
     fk00731   974 V-----TGCTVHFVAEDVDAGQIILQEAVPVKR-GDTVATLSERVKLAEH 1017 

                   kiyPlaiawlaqgrlkie<-*
                   ki+P+a++++a g++ +    
     fk00731  1018 KIFPAALQLVASGTVQLG    1035 

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