hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-22543247/chunk_1/iprscan-20080810-22543247.nocrc
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Query sequence: fk01269
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N 
--------       -----------                              -----    ------- ---
PF00454.17.ls  Phosphatidylinositol 3- and 4-kinase     277.5    2.4e-80   1
PF00454.17.fs  Phosphatidylinositol 3- and 4-kinase     275.8    7.8e-80   1
PF02260.10.fs  FATC domain                               56.0    2.8e-15   1
PF02260.10.ls  FATC domain                               58.0      3e-14   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
PF00454.17.fs    1/1     376   613 ..     1   329 []   275.8  7.8e-80
PF00454.17.ls    1/1     376   613 ..     1   329 []   277.5  2.4e-80
PF02260.10.fs    1/1     694   726 .]     1    33 []    56.0  2.8e-15
PF02260.10.ls    1/1     694   726 .]     1    33 []    58.0    3e-14

Alignments of top-scoring domains:
PF00454.17.fs: domain 1 of 1, from 376 to 613: score 275.8, E = 7.8e-80
                   *->gypfifKgGdDLrsrQDelvlQligVfKPkDEEPyApnNPkgtkvsq
                      ++pf++KgG+DLr  QD++v+Ql+                       
     fk01269   376    EHPFLVKGGEDLR--QDQRVEQLF----------------------- 397  

                   GerlmnkllkgegldrrRnlqltaYlviplgpgsGlIEwvpnsttlaeil
                     ++mn++l +++++ +R lql++Y+v+p+ +          s++ a+ +
     fk01269   398 --QVMNGILAQDSACSQRALQLRTYSVVPMTS----------SDPRAP-P 434  

                   rtymvkkaikdfnksrffkdkkttkkleknakll.k.ehk.llqmvldrk
                   ++y                          +++l + +++ +   + l++k
     fk01269   435 CEY--------------------------KDWLTkMsGKHdVGAYMLMYK 458  

                   qltllekvevFeeklsntpkpgllqwFvkknpdaapyeewfeRfardnfv
                    ++++e+v  F++++s++p + l + Fv +++++   e++++   r++f+
     fk01269   459 GANRTETVTSFRKRESKVPADLLKRAFVRMSTSP---EAFLA--LRSHFA 503  

                   rScAgmsvldYiLGigDRHldNiLvkkndkktGklfHIDFGlcfghvkgk
                   +S+A +++ ++iLGigDRHl+N++v    ++tG +++IDFG++fg ++++
     fk01269   504 SSHALICISHWILGIGDRHLNNFMV---AMETGGVIGIDFGHAFG-SATQ 549  

                   rgpkpervPFrLTrWPQaklpmveamggyiasLgpsgdeglFrelceeay
                   ++p+pe++PFrLTr      +++++m        p+++ gl+ +++++a+
     fk01269   550 FLPVPELMPFRLTR------QFINLM-------LPMKETGLMYSIMVHAL 586  

                   ralRrnanlllnlLkkkAvarGelmledglpdwrs<-*
                   ra+R++ +ll+n++        + ++  +++dw+    
     fk01269   587 RAFRSDPGLLTNTM--------DVFVKEPSFDWKN    613  

PF00454.17.ls: domain 1 of 1, from 376 to 613: score 277.5, E = 2.4e-80
                   *->gypfifKgGdDLrsrQDelvlQligVfKPkDEEPyApnNPkgtkvsq
                      ++pf++KgG+DLr  QD++v+Ql+                       
     fk01269   376    EHPFLVKGGEDLR--QDQRVEQLF----------------------- 397  

                   GerlmnkllkgegldrrRnlqltaYlviplgpgsGlIEwvpnsttlaeil
                     ++mn++l +++++ +R lql++Y+v+p+ +          s++ a+ +
     fk01269   398 --QVMNGILAQDSACSQRALQLRTYSVVPMTS----------SDPRAP-P 434  

                   rtymvkkaikdfnksrffkdkkttkkleknakll.k.ehk.llqmvldrk
                   ++y                          +++l + +++ +   + l++k
     fk01269   435 CEY--------------------------KDWLTkMsGKHdVGAYMLMYK 458  

                   qltllekvevFeeklsntpkpgllqwFvkknpdaapyeewfeRfardnfv
                    ++++e+v  F++++s++p + l + Fv +++++   e++++   r++f+
     fk01269   459 GANRTETVTSFRKRESKVPADLLKRAFVRMSTSP---EAFLA--LRSHFA 503  

                   rScAgmsvldYiLGigDRHldNiLvkkndkktGklfHIDFGlcfghvkgk
                   +S+A +++ ++iLGigDRHl+N++v    ++tG +++IDFG++fg ++++
     fk01269   504 SSHALICISHWILGIGDRHLNNFMV---AMETGGVIGIDFGHAFG-SATQ 549  

                   rgpkpervPFrLTrWPQaklpmveamggyiasLgpsgdeglFrelceeay
                   ++p+pe++PFrLTr      +++++m        p+++ gl+ +++++a+
     fk01269   550 FLPVPELMPFRLTR------QFINLM-------LPMKETGLMYSIMVHAL 586  

                   ralRrnanlllnlLkkkAvarGelmledglpdwrs<-*
                   ra+R++ +ll+n++        + ++  +++dw+    
     fk01269   587 RAFRSDPGLLTNTM--------DVFVKEPSFDWKN    613  

PF02260.10.fs: domain 1 of 1, from 694 to 726: score 56.0, E = 2.8e-15
                   *->epLsvegqvedLIqqATspenLsqmYiGWcPfl<-*
                      ++Ls+e+qv++L +qAT+p++L+++++GW+P++   
     fk01269   694    SGLSEETQVKCLMDQATDPNILGRTWEGWEPWM    726  

PF02260.10.ls: domain 1 of 1, from 694 to 726: score 58.0, E = 3e-14
                   *->epLsvegqvedLIqqATspenLsqmYiGWcPfl<-*
                      ++Ls+e+qv++L +qAT+p++L+++++GW+P++   
     fk01269   694    SGLSEETQVKCLMDQATDPNILGRTWEGWEPWM    726  

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