hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-23115807/chunk_1/iprscan-20080810-23115807.nocrc
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Query sequence: fk01449
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TIGR00870 trp: transient-receptor-potential calcium ch  1400.8          0   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TIGR00870   1/1      18   750 ..     1   871 []  1400.8        0

Alignments of top-scoring domains:
TIGR00870: domain 1 of 1, from 18 to 750: score 1400.8, E = 0
                   *->RehifttrknrLygkldirkgveaeeielseeekaflpavergdvas
                      R+            +l+i   v+ae+ els++eka+l+ave+gd+as
     fk01449    18    RI------------PLRI---VRAES-ELSPSEKAYLNAVEKGDYAS 48   

                   vkrkleeaklvyklninwkkgCvdrlgrsaLlsaAieNenleLteLLlnl
                   vk++leea++++k+nin    C+d+lgr aLl +AieNenleL+eLLl++
     fk01449    49 VKKSLEEAEIYFKININ----CIDPLGRTALL-IAIENENLELIELLLSF 93   

                   srtskylTDSeyqrgevGdaLLhaisleyvdavEailllllkaaresgpl
                   +             ++vGdaLLhai++e+v+avE++l+++++++++++p+
     fk01449    94 N-------------VYVGDALLHAIRKEVVGAVELLLNHKKPSGEKQVPP 130  

                   sPlEqELrDDDelandqytseftpgiTaLhLAihrqnyeiVklLLerGAs
                               +  d+++seftp+iT+++LA+h++nyei+klL+++G+s
     fk01449   131 ------------ILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVS 168  

                   VprPHDarangdefvPEDFKLtNKksqgvdslyhgespLnaaaclaspsi
                   VprPH++r+n++e+v         +s++vdsl+h++s+Ln++++lasps+
     fk01449   169 VPRPHEVRCNCVECV---------SSSDVDSLRHSRSRLNIYKALASPSL 209  

                   vaLlsedPhQPAdiltadsLGNtllhllvmenEFkaEyeelstqmynfal
                   +aL+sedP     +lta++L+++l++l+++enEFk+Eyeels+q+++fa+
     fk01449   210 IALSSEDP-----FLTAFQLSWELQELSKVENEFKSEYEELSRQCKQFAK 254  

                   slldklrdskeLEvIlNhqgltPlkLaakegkielfrlkLaIkYkglcrL
                   +lld++r+s+eLE+IlN++++++  L ++++ ++l+rlkLaIkY+     
     fk01449   255 DLLDQTRSSRELEIILNYRDDNS--LIEEQSGNDLARLKLAIKYR----- 297  

                   qkKFvawpngqqllslywleeldgwrrkqsvlelivvfviglkfPelsdm
                   qk+Fva+pn+qqll+++w++e++gwrr++++++++++f+igl+fP++s++
     fk01449   298 QKEFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVC 347  

                   yliaPlskLgkfkwKpFikfifhsasylyfLyLliftsvayyrPlktLln
                   yliaP+s+Lg+f++KpFikfi+h+asyl+fL+Ll+++s+++         
     fk01449   348 YLIAPKSPLGLFIRKPFIKFICHTASYLTFLFLLLLASQHID-------- 389  

                   fkenrtdledqifrvrgleqtllemliltwvdglilseekliwlgGvfey
                       r dl+     ++g+++t++e++il+wv+g+i++e+k++w+gG+++y
     fk01449   390 ----RSDLN-----RQGPPPTIVEWMILPWVLGFIWGEIKQMWDGGLQDY 430  

                   ildlwnildfgmnsfylatfllrpfailfvtqaqayvdiyflvlrehwlp
                   i+d+wn++df+mns+ylat++l+++a+++++         +l++re+w++
     fk01449   431 IHDWWNLMDFVMNSLYLATISLKIVAFVKYS---------ALNPRESWDM 471  

                   fdptlieeaLfafAlvlSwlnLlYifrgnqhlGPlqimlgrMIlgDilrF
                   ++ptl++eaLfa+A+++S+l+L+++f++n+hlGPlqi+lgrM+l Dil+F
     fk01449   472 WHPTLVAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLL-DILKF 520  

                   lfiYavVLfaFacglnqLyqyydalklnecsNaTtlkphrcdidepekAC
                   lfiY++VL+aFa+glnqLy+yy+++k +      t+k++rc++++     
     fk01449   521 LFIYCLVLLAFANGLNQLYFYYEETKGL------TCKGIRCEKQN----- 559  

                   yignaystlfEtlqeLFwaiiGlvdLvsvnlknehkftefvglllfgaYn
                      na+stlfEtlq+LFw+i+Gl++L+++n+k++h+ftefvg+++fg+Yn
     fk01449   560 ---NAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATMFGTYN 606  

                   viaiilLLNMLIAMMgntYqlIaeeaDeeWKfqraklwlsyereggKERL
                   vi++++LLNMLIAMM+n+YqlIa++aD+eWKf+r+klw+sy++egg    
     fk01449   607 VISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGG---- 652  

                   AtlppPfniipspksfvgdrlikliekklgkkrerwcrRveevnwttwer
                    tlp+Pfn+ipspks ++  lik+i+++l+kk+   +rR++e++ t+ +r
     fk01449   653 -TLPTPFNVIPSPKSLWY--LIKWIWTHLCKKK---MRRKPESFGTIGRR 696  

                   kaetlsedpgncervketlsfteqlvlllryqevmkrlikryVlaeqrpr
                   +a++l+++                    ++yqevm++l+kryV+a++r++
     fk01449   697 AADNLRRH--------------------HQYQEVMRNLVKRYVAAMIRDA 726  

                   dsdegtteeeikelkqdisSlRfE<-*
                   +++eg+tee++kelkqdisS+RfE   
     fk01449   727 KTEEGLTEENFKELKQDISSFRFE    750  

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