hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080810/iprscan-20080810-23305190/chunk_1/iprscan-20080810-23305190.nocrc
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Query sequence: fk01593
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
PF02045.6.fs CCAAT-binding transcription factor (CBF-B/N   130.7    4.5e-47   1
PF02045.6.ls CCAAT-binding transcription factor (CBF-B/N   132.7    9.5e-37   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
PF02045.6.fs   1/1     275   331 ..     1    57 []   130.7  4.5e-47
PF02045.6.ls   1/1     275   331 ..     1    57 []   132.7  9.5e-37

Alignments of top-scoring domains:
PF02045.6.fs: domain 1 of 1, from 275 to 331: score 130.7, E = 4.5e-47
                   *->eePvyVNaKQYhrIlrRRqaRakleaelklikarkkYLHeSRHlHAl
                      eeP+yVNaKQYhrIl+RRqaRakleae+k++k+r+kYLHeSRH+HA+
     fk01593   275    EEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAM 321  

                   rRpRGsGGRF<-*
                    R+RG+GGRF   
     fk01593   322 ARKRGEGGRF    331  

PF02045.6.ls: domain 1 of 1, from 275 to 331: score 132.7, E = 9.5e-37
                   *->eePvyVNaKQYhrIlrRRqaRakleaelklikarkkYLHeSRHlHAl
                      eeP+yVNaKQYhrIl+RRqaRakleae+k++k+r+kYLHeSRH+HA+
     fk01593   275    EEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAM 321  

                   rRpRGsGGRF<-*
                    R+RG+GGRF   
     fk01593   322 ARKRGEGGRF    331  

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