# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofk01625.fasta.nr -Q fk01625.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fk01625, 716 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6838990 sequences Expectation_n fit: rho(ln(x))= 5.3865+/-0.000182; mu= 11.6406+/- 0.010 mean_var=71.0806+/-13.948, 0's: 50 Z-trim: 86 B-trim: 0 in 0/67 Lambda= 0.152124 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62087498|dbj|BAD92196.1| protocadherin beta 9 p ( 716) 4661 1032.4 0 gi|71680797|gb|AAI00673.1| Protocadherin beta 9 [H ( 797) 4650 1030.0 0 gi|13431372|sp|Q9Y5E1.2|PCDB9_HUMAN Protocadherin ( 797) 4645 1028.9 0 gi|73768710|gb|AAI03495.1| PCDHB9 protein [Homo sa ( 796) 4636 1027.0 0 gi|8926617|gb|AAF81913.1|AF217749_1 protocadherin ( 797) 4635 1026.7 0 gi|62510877|sp|Q5DRC4.1|PCDB9_PANTR Protocadherin ( 797) 4540 1005.9 0 gi|114602280|ref|XP_001145015.1| PREDICTED: protoc ( 798) 4264 945.3 0 gi|62510891|sp|Q5DRD9.1|PCDBA_PANTR Protocadherin ( 798) 4216 934.8 0 gi|119582377|gb|EAW61973.1| hCG1982206 [Homo sapie ( 798) 4209 933.2 0 gi|14009461|gb|AAK51616.1|AF217748_1 protocadherin ( 800) 4199 931.1 0 gi|13431371|sp|Q9UN67.1|PCDBA_HUMAN Protocadherin ( 800) 4189 928.9 0 gi|193786411|dbj|BAG51694.1| unnamed protein produ ( 800) 4189 928.9 0 gi|109079034|ref|XP_001091293.1| PREDICTED: protoc ( 798) 4160 922.5 0 gi|194219826|ref|XP_001918075.1| PREDICTED: simila ( 796) 3896 864.6 0 gi|119895633|ref|XP_599952.3| PREDICTED: similar t ( 799) 3833 850.7 0 gi|109078996|ref|XP_001090002.1| PREDICTED: simila ( 795) 3707 823.1 0 gi|149017305|gb|EDL76356.1| rCG49451 [Rattus norve ( 792) 3660 812.8 0 gi|62510887|sp|Q5DRD5.1|PCDBE_PANTR Protocadherin ( 798) 3656 811.9 0 gi|13876296|gb|AAK26068.1| protocadherin beta 18 [ ( 792) 3642 808.8 0 gi|74150045|dbj|BAE24345.1| unnamed protein produc ( 792) 3639 808.1 0 gi|62510884|sp|Q5DRD2.1|PCDB2_PANTR Protocadherin ( 798) 3639 808.2 0 gi|14039475|gb|AAK53236.1|AF326311_1 protocadherin ( 792) 3625 805.1 0 gi|68532427|gb|AAH98144.1| PCDHB14 protein [Homo s ( 797) 3625 805.1 0 gi|13431380|sp|Q9Y5E9.1|PCDBE_HUMAN Protocadherin ( 798) 3625 805.1 0 gi|13431373|sp|Q9Y5E2.1|PCDB7_HUMAN Protocadherin ( 793) 3623 804.6 0 gi|62896915|dbj|BAD96398.1| protocadherin beta 7 p ( 793) 3623 804.6 0 gi|68533589|gb|AAH98574.1| Protocadherin beta 7 [H ( 793) 3617 803.3 0 gi|114602268|ref|XP_001144643.1| PREDICTED: simila ( 793) 3616 803.1 0 gi|109079047|ref|XP_001091889.1| PREDICTED: protoc ( 798) 3614 802.7 0 gi|62089076|dbj|BAD92982.1| protocadherin beta 2 p ( 784) 3612 802.2 0 gi|62510879|sp|Q5DRC7.1|PCDB7_PANTR Protocadherin ( 793) 3612 802.2 0 gi|109078990|ref|XP_001089770.1| PREDICTED: protoc ( 798) 3612 802.2 0 gi|149726258|ref|XP_001504128.1| PREDICTED: simila ( 795) 3607 801.1 0 gi|62896679|dbj|BAD96280.1| protocadherin beta 7 p ( 793) 3605 800.7 0 gi|114602248|ref|XP_001144032.1| PREDICTED: protoc ( 798) 3601 799.8 0 gi|189054431|dbj|BAG37204.1| unnamed protein produ ( 798) 3597 798.9 0 gi|13431378|sp|Q9Y5E7.1|PCDB2_HUMAN Protocadherin ( 798) 3597 798.9 0 gi|114602262|ref|XP_001144418.1| PREDICTED: simila ( 795) 3595 798.5 0 gi|68534244|gb|AAH98575.1| Protocadherin beta 2 [H ( 798) 3586 796.5 0 gi|62510883|sp|Q5DRD1.1|PCDB3_PANTR Protocadherin ( 796) 3580 795.2 0 gi|8926619|gb|AAF81914.1|AF217757_1 protocadherin ( 776) 3575 794.1 0 gi|13431377|sp|Q9Y5E6.1|PCDB3_HUMAN Protocadherin ( 796) 3575 794.1 0 gi|23271279|gb|AAH36062.1| Protocadherin beta 16 [ ( 776) 3574 793.9 0 gi|114602306|ref|XP_001146165.1| PREDICTED: protoc ( 776) 3574 793.9 0 gi|85396890|gb|AAI04818.1| Protocadherin beta 3 [H ( 796) 3572 793.4 0 gi|108885347|sp|Q9NRJ7.2|PCDBG_HUMAN Protocadherin ( 776) 3569 792.8 0 gi|119582372|gb|EAW61968.1| protocadherin beta 15 ( 787) 3566 792.1 0 gi|13876376|gb|AAK21988.1| protocadherin beta 8a [ ( 776) 3561 791.0 0 gi|62510888|sp|Q5DRD6.1|PCDBD_PANTR Protocadherin ( 798) 3561 791.0 0 gi|13431379|sp|Q9Y5E8.1|PCDBF_HUMAN Protocadherin ( 787) 3560 790.8 0 >>gi|62087498|dbj|BAD92196.1| protocadherin beta 9 precu (716 aa) initn: 4661 init1: 4661 opt: 4661 Z-score: 5522.6 bits: 1032.4 E(): 0 Smith-Waterman score: 4661; 100.000% identity (100.000% similar) in 716 aa overlap (1-716:1-716) 10 20 30 40 50 60 fk0162 GNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHSPVFRHKEMVLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHSPVFRHKEMVLK 10 20 30 40 50 60 70 80 90 100 110 120 fk0162 ISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDEGMIYPELVLDKALD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDEGMIYPELVLDKALD 70 80 90 100 110 120 130 140 150 160 170 180 fk0162 GEEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNVPQFAQALYETQAPENSPVGSLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GEEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNVPQFAQALYETQAPENSPVGSLI 130 140 150 160 170 180 190 200 210 220 230 240 fk0162 VKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDYELVNSYKINIQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDYELVNSYKINIQA 190 200 210 220 230 240 250 260 270 280 290 300 fk0162 MDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSPGIVLAVFKIKDRDSGENGKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 MDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSPGIVLAVFKIKDRDSGENGKT 250 260 270 280 290 300 310 320 330 340 350 360 fk0162 ICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQV 310 320 330 340 350 360 370 380 390 400 410 420 fk0162 SDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLA 370 380 390 400 410 420 430 440 450 460 470 480 fk0162 SLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSEALVRVLVLDANDNSPFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSEALVRVLVLDANDNSPFV 430 440 450 460 470 480 490 500 510 520 530 540 fk0162 LYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHN 490 500 510 520 530 540 550 560 570 580 590 600 fk0162 GEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPEAAPAQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPEAAPAQA 550 560 570 580 590 600 610 620 630 640 650 660 fk0162 QADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCSVPEGPFPGHLVDVSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 QADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCSVPEGPFPGHLVDVSG 610 620 630 640 650 660 670 680 690 700 710 fk0162 TGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRGGKEIEENSTLPNSFGFNY :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRGGKEIEENSTLPNSFGFNY 670 680 690 700 710 >>gi|71680797|gb|AAI00673.1| Protocadherin beta 9 [Homo (797 aa) initn: 4650 init1: 4650 opt: 4650 Z-score: 5508.9 bits: 1030.0 E(): 0 Smith-Waterman score: 4650; 99.860% identity (99.860% similar) in 716 aa overlap (1-716:82-797) 10 20 30 fk0162 GNLLTNEKLDREKLCGPKEPCMLYFQILMD :::::::::::::::::::::::::::::: gi|716 LGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMD 60 70 80 90 100 110 40 50 60 70 80 90 fk0162 DPFQIYRAELRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 DPFQIYRAELRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYT 120 130 140 150 160 170 100 110 120 130 140 150 fk0162 ISSNSFFHIKISGSDEGMIYPELVLDKALDGEEQEELSLTLTALDGGSPSRSGTSTIRIV :::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::: gi|716 ISSNSFFHIKISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIV 180 190 200 210 220 230 160 170 180 190 200 210 fk0162 VLDVNDNVPQFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 VLDVNDNVPQFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTT 240 250 260 270 280 290 220 230 240 250 260 270 fk0162 FQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 FQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISS 300 310 320 330 340 350 280 290 300 310 320 330 fk0162 LSNSVAENSPGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 LSNSVAENSPGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDR 360 370 380 390 400 410 340 350 360 370 380 390 fk0162 ESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 ESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIG 420 430 440 450 460 470 400 410 420 430 440 450 fk0162 SVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 SVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRV 480 490 500 510 520 530 460 470 480 490 500 510 fk0162 GASDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 GASDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVA 540 550 560 570 580 590 520 530 540 550 560 570 fk0162 VDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 VDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPP 600 610 620 630 640 650 580 590 600 610 620 630 fk0162 RSATATLHVLLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 RSATATLHVLLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAV 660 670 680 690 700 710 640 650 660 670 680 690 fk0162 RLCRRSRAASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 RLCRRSRAASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPIT 720 730 740 750 760 770 700 710 fk0162 PHLPPHRGGKEIEENSTLPNSFGFNY :::::::::::::::::::::::::: gi|716 PHLPPHRGGKEIEENSTLPNSFGFNY 780 790 >>gi|13431372|sp|Q9Y5E1.2|PCDB9_HUMAN Protocadherin beta (797 aa) initn: 4645 init1: 4645 opt: 4645 Z-score: 5503.0 bits: 1028.9 E(): 0 Smith-Waterman score: 4645; 99.721% identity (99.860% similar) in 716 aa overlap (1-716:82-797) 10 20 30 fk0162 GNLLTNEKLDREKLCGPKEPCMLYFQILMD :::::::::::::::::::::::::::::: gi|134 LGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMD 60 70 80 90 100 110 40 50 60 70 80 90 fk0162 DPFQIYRAELRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 DPFQIYRAELRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYT 120 130 140 150 160 170 100 110 120 130 140 150 fk0162 ISSNSFFHIKISGSDEGMIYPELVLDKALDGEEQEELSLTLTALDGGSPSRSGTSTIRIV :::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::: gi|134 ISSNSFFHIKISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIV 180 190 200 210 220 230 160 170 180 190 200 210 fk0162 VLDVNDNVPQFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTT :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 VLDVNDNAPQFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTT 240 250 260 270 280 290 220 230 240 250 260 270 fk0162 FQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 FQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISS 300 310 320 330 340 350 280 290 300 310 320 330 fk0162 LSNSVAENSPGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LSNSVAENSPGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDR 360 370 380 390 400 410 340 350 360 370 380 390 fk0162 ESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 ESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIG 420 430 440 450 460 470 400 410 420 430 440 450 fk0162 SVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 SVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRV 480 490 500 510 520 530 460 470 480 490 500 510 fk0162 GASDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 GASDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVA 540 550 560 570 580 590 520 530 540 550 560 570 fk0162 VDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 VDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPP 600 610 620 630 640 650 580 590 600 610 620 630 fk0162 RSATATLHVLLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 RSATATLHVLLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAV 660 670 680 690 700 710 640 650 660 670 680 690 fk0162 RLCRRSRAASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 RLCRRSRAASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPIT 720 730 740 750 760 770 700 710 fk0162 PHLPPHRGGKEIEENSTLPNSFGFNY :::::::::::::::::::::::::: gi|134 PHLPPHRGGKEIEENSTLPNSFGFNY 780 790 >>gi|73768710|gb|AAI03495.1| PCDHB9 protein [Homo sapien (796 aa) initn: 4636 init1: 4636 opt: 4636 Z-score: 5492.3 bits: 1027.0 E(): 0 Smith-Waterman score: 4636; 99.581% identity (99.721% similar) in 716 aa overlap (1-716:81-796) 10 20 30 fk0162 GNLLTNEKLDREKLCGPKEPCMLYFQILMD :::::::::::::::::::::::::::::: gi|737 LGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMD 60 70 80 90 100 110 40 50 60 70 80 90 fk0162 DPFQIYRAELRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|737 DPFQIYRAELRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYT 120 130 140 150 160 170 100 110 120 130 140 150 fk0162 ISSNSFFHIKISGSDEGMIYPELVLDKALDGEEQEELSLTLTALDGGSPSRSGTSTIRIV :::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::: gi|737 ISSNSFFHIKISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIV 180 190 200 210 220 230 160 170 180 190 200 210 fk0162 VLDVNDNVPQFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTT :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|737 VLDVNDNAPQFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTT 240 250 260 270 280 290 220 230 240 250 260 270 fk0162 FQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|737 FQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISS 300 310 320 330 340 350 280 290 300 310 320 330 fk0162 LSNSVAENSPGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|737 LSNSVAENSPGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDR 360 370 380 390 400 410 340 350 360 370 380 390 fk0162 ESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|737 ESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIG 420 430 440 450 460 470 400 410 420 430 440 450 fk0162 SVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|737 SVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRV 480 490 500 510 520 530 460 470 480 490 500 510 fk0162 GASDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|737 GASDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVA 540 550 560 570 580 590 520 530 540 550 560 570 fk0162 VDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|737 VDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPP 600 610 620 630 640 650 580 590 600 610 620 630 fk0162 RSATATLHVLLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAV :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|737 RSATATLHVLLVDGFSQPYLPLPEAAPAQAQADLLTVYPVVALASVSSLFLLSVLLFVAV 660 670 680 690 700 710 640 650 660 670 680 690 fk0162 RLCRRSRAASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|737 RLCRRSRAASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPIT 720 730 740 750 760 770 700 710 fk0162 PHLPPHRGGKEIEENSTLPNSFGFNY :::::::::::::::::::::::::: gi|737 PHLPPHRGGKEIEENSTLPNSFGFNY 780 790 >>gi|8926617|gb|AAF81913.1|AF217749_1 protocadherin beta (797 aa) initn: 4635 init1: 4635 opt: 4635 Z-score: 5491.1 bits: 1026.7 E(): 0 Smith-Waterman score: 4635; 99.441% identity (99.721% similar) in 716 aa overlap (1-716:82-797) 10 20 30 fk0162 GNLLTNEKLDREKLCGPKEPCMLYFQILMD :::::::::::::::::::::::::::::: gi|892 LGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMD 60 70 80 90 100 110 40 50 60 70 80 90 fk0162 DPFQIYRAELRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYT :::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::: gi|892 DPFQIYRAELRVSDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYT 120 130 140 150 160 170 100 110 120 130 140 150 fk0162 ISSNSFFHIKISGSDEGMIYPELVLDKALDGEEQEELSLTLTALDGGSPSRSGTSTIRIV :::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::: gi|892 ISSNSFFHIKISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIV 180 190 200 210 220 230 160 170 180 190 200 210 fk0162 VLDVNDNVPQFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTT :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|892 VLDVNDNAPQFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTT 240 250 260 270 280 290 220 230 240 250 260 270 fk0162 FQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|892 FQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISS 300 310 320 330 340 350 280 290 300 310 320 330 fk0162 LSNSVAENSPGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|892 LSNSVAENSPGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDR 360 370 380 390 400 410 340 350 360 370 380 390 fk0162 ESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIG ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|892 ESKAEYNITITVTDMGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIG 420 430 440 450 460 470 400 410 420 430 440 450 fk0162 SVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|892 SVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRV 480 490 500 510 520 530 460 470 480 490 500 510 fk0162 GASDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|892 GASDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVA 540 550 560 570 580 590 520 530 540 550 560 570 fk0162 VDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|892 VDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPP 600 610 620 630 640 650 580 590 600 610 620 630 fk0162 RSATATLHVLLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|892 RSATATLHVLLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAV 660 670 680 690 700 710 640 650 660 670 680 690 fk0162 RLCRRSRAASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|892 RLCRRSRAASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPIT 720 730 740 750 760 770 700 710 fk0162 PHLPPHRGGKEIEENSTLPNSFGFNY :::::::::::::::::::::::::: gi|892 PHLPPHRGGKEIEENSTLPNSFGFNY 780 790 >>gi|62510877|sp|Q5DRC4.1|PCDB9_PANTR Protocadherin beta (797 aa) initn: 4540 init1: 4540 opt: 4540 Z-score: 5378.4 bits: 1005.9 E(): 0 Smith-Waterman score: 4540; 97.905% identity (98.464% similar) in 716 aa overlap (1-716:82-797) 10 20 30 fk0162 GNLLTNEKLDREKLCGPKEPCMLYFQILMD :::::::::::::::::::::::::::::: gi|625 LGLAEGKLAARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMD 60 70 80 90 100 110 40 50 60 70 80 90 fk0162 DPFQIYRAELRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 DPFQIYRAELRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYT 120 130 140 150 160 170 100 110 120 130 140 150 fk0162 ISSNSFFHIKISGSDEGMIYPELVLDKALDGEEQEELSLTLTALDGGSPSRSGTSTIRIV :: ::::::::::::::::::::::::::: ::::::::::::::::::::::::::::: gi|625 ISPNSFFHIKISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIV 180 190 200 210 220 230 160 170 180 190 200 210 fk0162 VLDVNDNVPQFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTT :::::::.:::::::::::::::::::: ::::::::::::::::::::::::::::::: gi|625 VLDVNDNAPQFAQALYETQAPENSPVGSRIVKVSAGDADSGVNAEVSYSFFDASEDILTT 240 250 260 270 280 290 220 230 240 250 260 270 fk0162 FQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISS ::::: ::::::::::::::::::: :::::::::::::::::::::::::::::::::: gi|625 FQINPSSGEIFLRELLDYELVNSYKRNIQAMDGGGLSARCTVLIKVLDSNDNPPELIISS 300 310 320 330 340 350 280 290 300 310 320 330 fk0162 LSNSVAENSPGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 LSNSVAENSPGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDR 360 370 380 390 400 410 340 350 360 370 380 390 fk0162 ESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|625 ESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHVG 420 430 440 450 460 470 400 410 420 430 440 450 fk0162 SVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRV ::: :: :::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|625 SVSPTDGDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRV 480 490 500 510 520 530 460 470 480 490 500 510 fk0162 GASDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVA ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 GATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVA 540 550 560 570 580 590 520 530 540 550 560 570 fk0162 VDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 VDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPP 600 610 620 630 640 650 580 590 600 610 620 630 fk0162 RSATATLHVLLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAV ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: gi|625 RSATATLHVLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLLSVLLFVAV 660 670 680 690 700 710 640 650 660 670 680 690 fk0162 RLCRRSRAASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 RLCRRSRAASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPIT 720 730 740 750 760 770 700 710 fk0162 PHLPPHRGGKEIEENSTLPNSFGFNY :::::: :::::::::: ::::::: gi|625 RHLPPHRVGKEIEENSTLHNSFGFNY 780 790 >>gi|114602280|ref|XP_001145015.1| PREDICTED: protocadhe (798 aa) initn: 4264 init1: 4264 opt: 4264 Z-score: 5051.1 bits: 945.3 E(): 0 Smith-Waterman score: 4264; 91.469% identity (96.503% similar) in 715 aa overlap (1-715:82-796) 10 20 30 fk0162 GNLLTNEKLDREKLCGPKEPCMLYFQILMD :::::::::::::::::::::::::::::: gi|114 LGLAEGKLAARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMD 60 70 80 90 100 110 40 50 60 70 80 90 fk0162 DPFQIYRAELRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYT ::::::::::::::::::.:::. :: ::::::::::::::::::::::: : :.::::: gi|114 DPFQIYRAELRVRDINDHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYT 120 130 140 150 160 170 100 110 120 130 140 150 fk0162 ISSNSFFHIKISGSDEGMIYPELVLDKALDGEEQEELSLTLTALDGGSPSRSGTSTIRIV :: ::::::::::::::::::::::::::: :::::::::::::::::::::::::.::: gi|114 ISPNSFFHIKISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTVRIV 180 190 200 210 220 230 160 170 180 190 200 210 fk0162 VLDVNDNVPQFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTT :::::::.:::::::::::::::::.: ::::::: :.:::::::::::::::::.: :: gi|114 VLDVNDNAPQFAQALYETQAPENSPIGFLIVKVSAEDVDSGVNAEVSYSFFDASENIRTT 240 250 260 270 280 290 220 230 240 250 260 270 fk0162 FQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISS :::::::::::::::::::::::::::::::::::::::: ::..:::.::::::::.:: gi|114 FQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSS 300 310 320 330 340 350 280 290 300 310 320 330 fk0162 LSNSVAENSPGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDR .::::::::: ::::::.::::::::: .::.:.::::.:::::.:::::.::::::: gi|114 FSNSVAENSPETPLAVFKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDR 360 370 380 390 400 410 340 350 360 370 380 390 fk0162 ESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIG : .:::::::::::::::::::::.::. ::::::::::::::::::::::::::::::: gi|114 ELRAEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIG 420 430 440 450 460 470 400 410 420 430 440 450 fk0162 SVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRV :::::: ::::::::::::::::: :::::::::::::::::::::::::::::::.::: gi|114 SVSATDGDSGTNAQVTYSLLPPQDLHLPLASLVSINADNGHLFALRSLDYEALQAFEFRV 480 490 500 510 520 530 460 470 480 490 500 510 fk0162 GASDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVA ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVA 540 550 560 570 580 590 520 530 540 550 560 570 fk0162 VDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPP 600 610 620 630 640 650 580 590 600 610 620 630 fk0162 RSATATLHVLLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAV ::::::::.::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|114 RSATATLHLLLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAV 660 670 680 690 700 710 640 650 660 670 680 690 fk0162 RLCRRSRAASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPIT ::::::::::::::::::::::::::::::. :: :::::::::.::: :.:::::::: gi|114 RLCRRSRAASVGRCSVPEGPFPGHLVDVSGAETLSQSYQYEVCLAGGSGTNEFKFLKPII 720 730 740 750 760 770 700 710 fk0162 PHLPPHRGGKEIEENSTLPNSFGFNY :..::. ::::. :::.::.:::: gi|114 PNFPPQCPGKEIQGNSTFPNNFGFNIQ 780 790 >>gi|62510891|sp|Q5DRD9.1|PCDBA_PANTR Protocadherin beta (798 aa) initn: 4216 init1: 4216 opt: 4216 Z-score: 4994.1 bits: 934.8 E(): 0 Smith-Waterman score: 4216; 90.769% identity (95.664% similar) in 715 aa overlap (1-715:82-796) 10 20 30 fk0162 GNLLTNEKLDREKLCGPKEPCMLYFQILMD :::::::::::::::::::::::::::::: gi|625 LGLAEGKLAARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMD 60 70 80 90 100 110 40 50 60 70 80 90 fk0162 DPFQIYRAELRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYT ::::::::::::::::::.:::. :: ::::::::::::::::::::::: : :.::::: gi|625 DPFQIYRAELRVRDINDHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYT 120 130 140 150 160 170 100 110 120 130 140 150 fk0162 ISSNSFFHIKISGSDEGMIYPELVLDKALDGEEQEELSLTLTALDGGSPSRSGTSTIRIV :: ::::::::::::::::::::::::::: :::::::::::::::::::::::::.::: gi|625 ISPNSFFHIKISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTVRIV 180 190 200 210 220 230 160 170 180 190 200 210 fk0162 VLDVNDNVPQFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTT :::::::.:::::::::::::::::.: ::::::: :.:::::::::::::::::.: :: gi|625 VLDVNDNAPQFAQALYETQAPENSPIGFLIVKVSAEDVDSGVNAEVSYSFFDASENIRTT 240 250 260 270 280 290 220 230 240 250 260 270 fk0162 FQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISS :::::::::::::::::::::::::::::::::::::::: ::..:::.::::::::.:: gi|625 FQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSS 300 310 320 330 340 350 280 290 300 310 320 330 fk0162 LSNSVAENSPGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDR .::::::::: ::::::.::::::::: .::.:.::::.:::::.:::::.::::::: gi|625 FSNSVAENSPETPLAVFKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDR 360 370 380 390 400 410 340 350 360 370 380 390 fk0162 ESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIG : .:::::::::::::::::::::.::. ::::::::::::::::::::::::::::::: gi|625 ELRAEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIG 420 430 440 450 460 470 400 410 420 430 440 450 fk0162 SVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRV :::::: ::::::::::::::::: :::::::::::::::::::::::::::::::.::: gi|625 SVSATDGDSGTNAQVTYSLLPPQDLHLPLASLVSINADNGHLFALRSLDYEALQAFEFRV 480 490 500 510 520 530 460 470 480 490 500 510 fk0162 GASDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVA ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 GATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVA 540 550 560 570 580 590 520 530 540 550 560 570 fk0162 VDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 VDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPP 600 610 620 630 640 650 580 590 600 610 620 630 fk0162 RSATATLHVLLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAV ::::::::.::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|625 RSATATLHLLLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAV 660 670 680 690 700 710 640 650 660 670 680 690 fk0162 RLCRRSRAASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPIT ::::::::::::::::::::::::::::::. :: :::::::::::: :.:::::::. gi|625 RLCRRSRAASVGRCSVPEGPFPGHLVDVSGAETLSQSYQYEVCLTGGPGTSEFKFLKPVI 720 730 740 750 760 770 700 710 fk0162 PHLPPHRGGKEIEENSTLPNSFGFNY . . :.. :::::. :::::: gi|625 SDIQAQGPGRKGEENSTFRNSFGFNIQ 780 790 >>gi|119582377|gb|EAW61973.1| hCG1982206 [Homo sapiens] (798 aa) initn: 4209 init1: 4209 opt: 4209 Z-score: 4985.8 bits: 933.2 E(): 0 Smith-Waterman score: 4209; 90.490% identity (95.524% similar) in 715 aa overlap (1-715:82-796) 10 20 30 fk0162 GNLLTNEKLDREKLCGPKEPCMLYFQILMD :::::::::::::::::::::::::::::: gi|119 LGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMD 60 70 80 90 100 110 40 50 60 70 80 90 fk0162 DPFQIYRAELRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYT ::::::::::::::::::.:::. :: ::::::::::::::::::::::: : :.::::: gi|119 DPFQIYRAELRVRDINDHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYT 120 130 140 150 160 170 100 110 120 130 140 150 fk0162 ISSNSFFHIKISGSDEGMIYPELVLDKALDGEEQEELSLTLTALDGGSPSRSGTSTIRIV :: ::::::.:::.:::::::::::::::: ::: :::::::::::::::::::::.::: gi|119 ISPNSFFHINISGGDEGMIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIV 180 190 200 210 220 230 160 170 180 190 200 210 fk0162 VLDVNDNVPQFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTT :::::::.:::::::::::::::::.: ::::: : :.:::::::::::::::::.: :: gi|119 VLDVNDNAPQFAQALYETQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTT 240 250 260 270 280 290 220 230 240 250 260 270 fk0162 FQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISS :::::::::::::::::::::::::::::::::::::::: ::..:::.::::::::.:: gi|119 FQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSS 300 310 320 330 340 350 280 290 300 310 320 330 fk0162 LSNSVAENSPGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDR .::::::::: ::::::.::::::::: .::.:.::::.:::::.:::::.::::::: gi|119 FSNSVAENSPETPLAVFKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDR 360 370 380 390 400 410 340 350 360 370 380 390 fk0162 ESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIG : .:::::::::::::::::::::.::. ::::::::::::::::::::::::::::::: gi|119 EIRAEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIG 420 430 440 450 460 470 400 410 420 430 440 450 fk0162 SVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|119 SVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRV 480 490 500 510 520 530 460 470 480 490 500 510 fk0162 GASDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVA ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVA 540 550 560 570 580 590 520 530 540 550 560 570 fk0162 VDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPP 600 610 620 630 640 650 580 590 600 610 620 630 fk0162 RSATATLHVLLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAV ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RSATATLHLLLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAV 660 670 680 690 700 710 640 650 660 670 680 690 fk0162 RLCRRSRAASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPIT :::::::::::::::::::::::::::: :. :: :::::::::::: :.:::::::. gi|119 RLCRRSRAASVGRCSVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVI 720 730 740 750 760 770 700 710 fk0162 PHLPPHRGGKEIEENSTLPNSFGFNY . . :.. :::::. :::::: gi|119 SDIQAQGPGRKGEENSTFRNSFGFNIQ 780 790 >>gi|14009461|gb|AAK51616.1|AF217748_1 protocadherin-bet (800 aa) initn: 3840 init1: 3640 opt: 4199 Z-score: 4974.0 bits: 931.1 E(): 0 Smith-Waterman score: 4199; 90.377% identity (95.258% similar) in 717 aa overlap (1-715:82-798) 10 20 30 fk0162 GNLLTNEKLDREKLCGPKEPCMLYFQILMD :::::::::::::::::::::::::::::: gi|140 LGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMD 60 70 80 90 100 110 40 50 60 70 80 90 fk0162 DPFQIYRAELRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYT ::::::::::::::::::.:::. :: ::::::::::::::::::::::: : :.::::: gi|140 DPFQIYRAELRVRDINDHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYT 120 130 140 150 160 170 100 110 120 130 140 150 fk0162 ISSNSFFHIKISGSDEGMIYPELVLDKALDGEEQEELSLTLTALDGGSPSRSGTSTIRIV :: ::::::.:::.:::::::::::::::: ::: :::::::::::::::::::::.::: gi|140 ISPNSFFHINISGGDEGMIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIV 180 190 200 210 220 230 160 170 180 190 200 210 fk0162 VLDVNDNVPQFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTT :::::::.:::::::::::::::::.: ::::: : :.:::::::::::::::::.: :: gi|140 VLDVNDNAPQFAQALYETQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTT 240 250 260 270 280 290 220 230 240 250 260 270 fk0162 FQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISS :::::::::::::::::::::::::::::::::::::::: ::..:::.::::::::.:: gi|140 FQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSS 300 310 320 330 340 350 280 290 300 310 320 330 fk0162 LSNSVAENSPGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDR .::::::::: ::::::.::::::::: .::.:.::::.:::::.:::::.::::::: gi|140 FSNSVAENSPETPLAVFKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDR 360 370 380 390 400 410 340 350 360 370 380 390 fk0162 ESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIG : .:::::::::::::::::::::.::. ::::::::::::::::::::::::::::::: gi|140 EIRAEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIG 420 430 440 450 460 470 400 410 420 430 440 450 fk0162 SVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|140 SVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRV 480 490 500 510 520 530 460 470 480 490 500 510 fk0162 GASDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVA ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|140 GATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVA 540 550 560 570 580 590 520 530 540 550 560 570 fk0162 VDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|140 VDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPP 600 610 620 630 640 650 580 590 600 610 620 fk0162 RSATATLHVLLVDGFSQPYLPLPEAAPAQAQA--DLLTVYLVVALASVSSLFLLSVLLFV :::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: gi|140 RSATATLHVLLVDGFSQPYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFV 660 670 680 690 700 710 630 640 650 660 670 680 fk0162 AVRLCRRSRAASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKP :::::::::::::::::::::::::::::: :. :: :::::::::::: :.::::::: gi|140 AVRLCRRSRAASVGRCSVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKP 720 730 740 750 760 770 690 700 710 fk0162 ITPHLPPHRGGKEIEENSTLPNSFGFNY . . . :.. :::::. :::::: gi|140 VISDIQAQGPGRKGEENSTFRNSFGFNIQ 780 790 800 716 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Sun Aug 10 23:34:24 2008 done: Sun Aug 10 23:36:19 2008 Total Scan time: 969.380 Total Display time: 0.330 Function used was FASTA [version 34.26.5 April 26, 2007]