hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-11083741/chunk_1/iprscan-20090618-11083741.nocrc
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Query sequence: fk02085
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00534                                                 434.3   6.2e-126   1
SM00533                                                 365.9   2.4e-105   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00533    1/1     325   649 ..     1   335 []   365.9 2.4e-105
SM00534    1/1     666   853 ..     1   199 []   434.3 6.2e-126

Alignments of top-scoring domains:
SM00533: domain 1 of 1, from 325 to 649: score 365.9, E = 2.4e-105
                   *->gkkgsLfslLnhckTpmGkRLLrrWLlqPLldlkeIneRldaVeell
                       ++ sL  lLn+ckTp+G+RL ++W++qPL+d+++I+eRl++Ve+++
     fk02085   325    TGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFV 371  

                   enqpelrqdlrqlLeLkripDleRllsrik..rasprdllklydslealp
                   e+ +elrq+l++ L L+r+pDl Rl+++++++ a+++d+++ly+ + +lp
     fk02085   372 ED-AELRQTLQEDL-LRRFPDLNRLAKKFQrqAANLQDCYRLYQGINQLP 419  

                   seirklleslespllgllksvlikplsellkeelellelllellvdddpl
                      +++le++e+ +++ll+ v+ +pl +l  ++++++++++e++ d+d++
     fk02085   420 -NVIQALEKHEGKHQKLLLAVFVTPLTDLR-SDFSKFQEMIETTLDMDQV 467  

                   evndgniglikdgfdpeLdelrkiienlkeeeieellkklreaetgidsl
                   e n++  +l+k++fdp+L elr+i++ l e+++++ l + ++ ++g+d  
     fk02085   468 E-NHE--FLVKPSFDPNLSELREIMNDL-EKKMQSTLISAAR-DLGLDPG 512  

                   k.igynkvrgdgYyievtksnaSllkkipk.adfigirvqslknterftt
                   k+i++ ++ ++gYy++vt++++   k ++++++f    v  +kn+++ft+
     fk02085   513 KqIKLDSSAQFGYYFRVTCKEE---KVLRNnKNFS--TVDIQKNGVKFTN 557  

                   pelkelenelleakeeieelekeifrellekvlehlpeLralaqalaeLD
                   ++l++l++e+   k e+ee++++i++e++++   + ++ + l+++la+LD
     fk02085   558 SKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLD 607  

                   vLlSlArlAksaegnyvrPefsedgdgeleikngRHPvlEaq<-*
                    ++S+A++++ a+++yvrP ++e+g+g++++k +RH ++E q   
     fk02085   608 AVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQ    649  

SM00534: domain 1 of 1, from 666 to 853: score 434.3, E = 6.2e-126
                   *->srlliITGPNMGGKSTyLRQvaLiviMAQiGsfVPAesAelpivDrI
                        ++iITGPNMGGKSTy+RQ+++iv+MAQiG+fVP+esAe++ivD+I
     fk02085   666    QMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCI 712  

                   FtRiGasDslaqGrSTFmvEMlEtanILknATknSLVilDElGRGTSTyD
                   ++R+Ga+Ds+++G+STFm+EMlEta+IL++ATk+SL+i+DElGRGTSTyD
     fk02085   713 LARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYD 762  

                   GlAIAyAvlEyLlekigaltLFaTHyheLtkladnhpgVrnlhmsaleee
                   G+++A+A++Ey+++kiga+++FaTH+heLt+la++ p V nlh++al +e
     fk02085   763 GFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVTALTTE 812  

                   esgesqgddedlditfLYkltpGvagkSYGihVAklAGlPksvierAkei
                   e           ++t+LY++++Gv+++S+GihVA+lA++Pk+vie Ak++
     fk02085   813 E-----------TLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQK 851  

                   lk<-*
                   +    
     fk02085   852 AL    853  

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