hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-00114061/chunk_1/iprscan-20080811-00114061.nocrc
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Query sequence: fk02476
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00360                                                  36.2    4.5e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00360    1/1      82   151 ..     1   121 []    36.2  4.5e-06

Alignments of top-scoring domains:
SM00360: domain 1 of 1, from 82 to 151: score 36.2, E = 4.5e-06
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                      +l+++ L  p +vte ++  l                +fGkv+++ +
     fk02476    82    VLHIRKL--PGEVTETEVIALG--------------LPFGKVTNILM 112  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                   ++ k+                            aF e ++ee+A     +
     fk02476   113 LKGKN---------------------------QAFLELATEEAAITM--V 133  

                   ealnaskGkeledgGrptlglrVe<-*
                   + +       l   ++p   ++++   
     fk02476   134 NYYS-AVTPHL--RNQP---IYIQ    151  

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