# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofk02504.fasta.nr -Q fk02504.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fk02504, 658 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6826392 sequences Expectation_n fit: rho(ln(x))= 5.1330+/-0.000186; mu= 13.0918+/- 0.010 mean_var=79.4752+/-15.410, 0's: 36 Z-trim: 127 B-trim: 47 in 1/66 Lambda= 0.143866 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|74760819|sp|Q96FE5.2|LIGO1_HUMAN Leucine-rich r ( 620) 4149 871.0 0 gi|109082029|ref|XP_001105006.1| PREDICTED: simila ( 693) 4135 868.2 0 gi|119913812|ref|XP_598942.3| PREDICTED: similar t ( 620) 4134 867.9 0 gi|37181688|gb|AAQ88651.1| QVSK201 [Homo sapiens] ( 620) 4131 867.3 0 gi|194039700|ref|XP_001929222.1| PREDICTED: leucin ( 620) 4124 865.9 0 gi|33305422|gb|AAQ02775.1|AF373780_1 putative tran ( 620) 4123 865.7 0 gi|119619602|gb|EAW99196.1| leucine rich repeat ne ( 614) 4112 863.4 0 gi|74001023|ref|XP_544785.2| PREDICTED: similar to ( 620) 4110 863.0 0 gi|75070887|sp|Q5RDJ4.1|LIGO1_PONAB Leucine-rich r ( 614) 4103 861.5 0 gi|75074561|sp|Q9N008.1|LIGO1_MACFA Leucine-rich r ( 614) 4102 861.3 0 gi|194206438|ref|XP_001490974.2| PREDICTED: leucin ( 614) 4097 860.3 0 gi|81916948|sp|Q9D1T0.1|LIGO1_MOUSE Leucine-rich r ( 614) 4091 859.0 0 gi|46250264|gb|AAH68558.1| LINGO1 protein [Homo sa ( 614) 4080 856.7 0 gi|126272292|ref|XP_001375232.1| PREDICTED: simila ( 987) 3941 828.1 0 gi|33305419|gb|AAQ02774.1|AF373779_1 putative tran ( 619) 3906 820.6 0 gi|82189069|sp|Q50L44.1|LIGO1_CHICK Leucine-rich r ( 613) 3882 815.6 0 gi|21739816|emb|CAD38935.1| hypothetical protein [ ( 577) 3858 810.6 0 gi|114658336|ref|XP_510686.2| PREDICTED: hypotheti ( 572) 3696 777.0 0 gi|149453860|ref|XP_001519177.1| PREDICTED: hypoth ( 697) 3595 756.1 7.7e-216 gi|182662398|sp|A4IIW9.1|LIGO1_XENTR Leucine-rich ( 606) 3509 738.2 1.6e-210 gi|159155958|gb|AAI54685.1| Lingo1 protein [Xenopu ( 606) 3508 738.0 1.9e-210 gi|189537250|ref|XP_693354.3| PREDICTED: sc:d0342, ( 629) 3466 729.3 8.2e-208 gi|62531162|gb|AAH92632.1| Lingo1 protein [Rattus ( 517) 3431 722.0 1.1e-205 gi|47225925|emb|CAF98405.1| unnamed protein produc ( 615) 3404 716.4 6e-204 gi|37675422|gb|AAQ97218.1| leucine-rich repeat neu ( 479) 3197 673.4 4.3e-191 gi|116668111|pdb|2ID5|A Chain A, Crystal Structure ( 477) 3189 671.7 1.4e-190 gi|37675420|gb|AAQ97217.1| leucine-rich repeat neu ( 469) 3152 664.0 2.7e-188 gi|82234400|sp|Q66HV9.1|LIGO1_DANRE Leucine-rich r ( 622) 3139 661.4 2.2e-187 gi|157676713|emb|CAP07991.1| unnamed protein produ ( 549) 3049 642.7 8.4e-182 gi|47230741|emb|CAF99934.1| unnamed protein produc ( 604) 2884 608.5 1.8e-171 gi|157676667|emb|CAP07968.1| zgc:92338 [Danio reri ( 553) 2796 590.2 5.4e-166 gi|149413010|ref|XP_001505252.1| PREDICTED: simila ( 606) 2538 536.7 7.6e-150 gi|57094053|ref|XP_538692.1| PREDICTED: similar to ( 606) 2532 535.4 1.8e-149 gi|118104493|ref|XP_429198.2| PREDICTED: similar t ( 606) 2526 534.2 4.3e-149 gi|149045619|gb|EDL98619.1| rCG54857 [Rattus norve ( 606) 2523 533.6 6.6e-149 gi|149736906|ref|XP_001498568.1| PREDICTED: leucin ( 606) 2523 533.6 6.6e-149 gi|55633281|ref|XP_528581.1| PREDICTED: leucine ri ( 606) 2520 532.9 1e-148 gi|123797445|sp|Q3URE9.1|LIGO2_MOUSE Leucine-rich ( 606) 2519 532.7 1.2e-148 gi|172046190|sp|Q7L985.1|LIGO2_HUMAN Leucine-rich ( 606) 2519 532.7 1.2e-148 gi|158255380|dbj|BAF83661.1| unnamed protein produ ( 606) 2518 532.5 1.4e-148 gi|126334024|ref|XP_001365152.1| PREDICTED: simila ( 606) 2518 532.5 1.4e-148 gi|26330906|dbj|BAC29183.1| unnamed protein produc ( 606) 2518 532.5 1.4e-148 gi|61832615|ref|XP_590571.1| PREDICTED: similar to ( 606) 2517 532.3 1.6e-148 gi|109111303|ref|XP_001104109.1| PREDICTED: simila ( 606) 2515 531.9 2.1e-148 gi|26337513|dbj|BAC32442.1| unnamed protein produc ( 606) 2510 530.9 4.3e-148 gi|50760963|ref|XP_418194.1| PREDICTED: similar to ( 605) 2374 502.6 1.3e-139 gi|118763564|gb|AAI28651.1| LOC100036699 protein [ ( 613) 2243 475.4 2.1e-131 gi|189546712|ref|XP_001922542.1| PREDICTED: sc:d03 ( 615) 2242 475.2 2.4e-131 gi|189516578|ref|XP_001919207.1| PREDICTED: simila ( 605) 2186 463.6 7.5e-128 gi|14042221|dbj|BAB55157.1| unnamed protein produc ( 315) 2145 454.9 1.7e-125 >>gi|74760819|sp|Q96FE5.2|LIGO1_HUMAN Leucine-rich repea (620 aa) initn: 4149 init1: 4149 opt: 4149 Z-score: 4652.3 bits: 871.0 E(): 0 Smith-Waterman score: 4149; 100.000% identity (100.000% similar) in 620 aa overlap (39-658:1-620) 10 20 30 40 50 60 fk0250 GGWAGAGAWSGRLERHAIGDRAERTEGAPEMQVSKRMLAGGVRSMPSPLLACWQPILLLV :::::::::::::::::::::::::::::: gi|747 MQVSKRMLAGGVRSMPSPLLACWQPILLLV 10 20 30 70 80 90 100 110 120 fk0250 LGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 LGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDE 40 50 60 70 80 90 130 140 150 160 170 180 fk0250 FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 100 110 120 130 140 150 190 200 210 220 230 240 fk0250 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 160 170 180 190 200 210 250 260 270 280 290 300 fk0250 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSI 220 230 240 250 260 270 310 320 330 340 350 360 fk0250 THCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 THCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYA 280 290 300 310 320 330 370 380 390 400 410 420 fk0250 FRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 FRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFN 340 350 360 370 380 390 430 440 450 460 470 480 fk0250 RQQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 RQQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADG 400 410 420 430 440 450 490 500 510 520 530 540 fk0250 DPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 DPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPA 460 470 480 490 500 510 550 560 570 580 590 600 fk0250 HLHVRSYSPDWPHQPNKTFAFISNQPGEGEANSTRATVPFPFDIKTLIIATTMGFISFLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 HLHVRSYSPDWPHQPNKTFAFISNQPGEGEANSTRATVPFPFDIKTLIIATTMGFISFLG 520 530 540 550 560 570 610 620 630 640 650 fk0250 VVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI :::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 VVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI 580 590 600 610 620 >>gi|109082029|ref|XP_001105006.1| PREDICTED: similar to (693 aa) initn: 4133 init1: 4133 opt: 4135 Z-score: 4636.0 bits: 868.2 E(): 0 Smith-Waterman score: 4135; 95.441% identity (96.657% similar) in 658 aa overlap (8-658:37-693) 10 20 30 fk0250 VGGGGNGGGGWA---G---AGAWSGRLERHAIGDRAE : ::: : ::. . :: : .: gi|109 CEKEVVTESFLRRWQVAVWPGGEVRVAYRSGLGWAVPCGPVHAGTATDRLL-HPRPPEAS 10 20 30 40 50 60 40 50 60 70 80 90 fk0250 RTEGAPEM-QVSKRMLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQD . .. :::.::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LFASRRHLTQVSERMLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQD 70 80 90 100 110 120 100 110 120 130 140 150 fk0250 RAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEP 130 140 150 160 170 180 160 170 180 190 200 210 fk0250 GAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSL 190 200 210 220 230 240 220 230 240 250 260 270 fk0250 EVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRD 250 260 270 280 290 300 280 290 300 310 320 330 fk0250 YSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 YSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFL 310 320 330 340 350 360 340 350 360 370 380 390 fk0250 NLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEE ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|109 NLSYNPISTIEGSMLHELLRLQEIQLVGGQLAMVEPYAFRGLNYLRVLNVSGNQLTTLEE 370 380 390 400 410 420 400 410 420 430 440 450 fk0250 SVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPD 430 440 450 460 470 480 460 470 480 490 500 510 fk0250 VLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNG 490 500 510 520 530 540 520 530 540 550 560 570 fk0250 RLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFI 550 560 570 580 590 600 580 590 600 610 620 630 fk0250 SNQPGEGEANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SNQPGEGEANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHN 610 620 630 640 650 660 640 650 fk0250 IEIEYVPRKSDAGISSADAPRKFNMKMI :::::::::::::::::::::::::::: gi|109 IEIEYVPRKSDAGISSADAPRKFNMKMI 670 680 690 >>gi|119913812|ref|XP_598942.3| PREDICTED: similar to le (620 aa) initn: 4134 init1: 4134 opt: 4134 Z-score: 4635.5 bits: 867.9 E(): 0 Smith-Waterman score: 4134; 99.516% identity (100.000% similar) in 620 aa overlap (39-658:1-620) 10 20 30 40 50 60 fk0250 GGWAGAGAWSGRLERHAIGDRAERTEGAPEMQVSKRMLAGGVRSMPSPLLACWQPILLLV ::::.::::::.:::::::::::::::::: gi|119 MQVSERMLAGGARSMPSPLLACWQPILLLV 10 20 30 70 80 90 100 110 120 fk0250 LGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDE 40 50 60 70 80 90 130 140 150 160 170 180 fk0250 FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 100 110 120 130 140 150 190 200 210 220 230 240 fk0250 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 160 170 180 190 200 210 250 260 270 280 290 300 fk0250 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSI 220 230 240 250 260 270 310 320 330 340 350 360 fk0250 THCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 THCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYA 280 290 300 310 320 330 370 380 390 400 410 420 fk0250 FRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFN :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|119 FRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFN 340 350 360 370 380 390 430 440 450 460 470 480 fk0250 RQQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RQQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADG 400 410 420 430 440 450 490 500 510 520 530 540 fk0250 DPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPA 460 470 480 490 500 510 550 560 570 580 590 600 fk0250 HLHVRSYSPDWPHQPNKTFAFISNQPGEGEANSTRATVPFPFDIKTLIIATTMGFISFLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HLHVRSYSPDWPHQPNKTFAFISNQPGEGEANSTRATVPFPFDIKTLIIATTMGFISFLG 520 530 540 550 560 570 610 620 630 640 650 fk0250 VVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI :::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI 580 590 600 610 620 >>gi|37181688|gb|AAQ88651.1| QVSK201 [Homo sapiens] (620 aa) initn: 4131 init1: 4131 opt: 4131 Z-score: 4632.1 bits: 867.3 E(): 0 Smith-Waterman score: 4131; 99.677% identity (99.677% similar) in 620 aa overlap (39-658:1-620) 10 20 30 40 50 60 fk0250 GGWAGAGAWSGRLERHAIGDRAERTEGAPEMQVSKRMLAGGVRSMPSPLLACWQPILLLV :::::::::::::::::::::::::::::: gi|371 MQVSKRMLAGGVRSMPSPLLACWQPILLLV 10 20 30 70 80 90 100 110 120 fk0250 LGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDE :::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::: gi|371 LGSVLSGSATGCPPRCECSAQDRAVLCHRKCFVAVPEGIPTETRLLDLGKNRIKTLNQDE 40 50 60 70 80 90 130 140 150 160 170 180 fk0250 FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|371 FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKQDI 100 110 120 130 140 150 190 200 210 220 230 240 fk0250 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 160 170 180 190 200 210 250 260 270 280 290 300 fk0250 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSI 220 230 240 250 260 270 310 320 330 340 350 360 fk0250 THCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 THCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYA 280 290 300 310 320 330 370 380 390 400 410 420 fk0250 FRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 FRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFN 340 350 360 370 380 390 430 440 450 460 470 480 fk0250 RQQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 RQQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADG 400 410 420 430 440 450 490 500 510 520 530 540 fk0250 DPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 DPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPA 460 470 480 490 500 510 550 560 570 580 590 600 fk0250 HLHVRSYSPDWPHQPNKTFAFISNQPGEGEANSTRATVPFPFDIKTLIIATTMGFISFLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 HLHVRSYSPDWPHQPNKTFAFISNQPGEGEANSTRATVPFPFDIKTLIIATTMGFISFLG 520 530 540 550 560 570 610 620 630 640 650 fk0250 VVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI :::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 VVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI 580 590 600 610 620 >>gi|194039700|ref|XP_001929222.1| PREDICTED: leucine ri (620 aa) initn: 4124 init1: 4124 opt: 4124 Z-score: 4624.3 bits: 865.9 E(): 0 Smith-Waterman score: 4124; 99.194% identity (100.000% similar) in 620 aa overlap (39-658:1-620) 10 20 30 40 50 60 fk0250 GGWAGAGAWSGRLERHAIGDRAERTEGAPEMQVSKRMLAGGVRSMPSPLLACWQPILLLV ::::.::::::..:.::::::::::::::: gi|194 MQVSERMLAGGAKSVPSPLLACWQPILLLV 10 20 30 70 80 90 100 110 120 fk0250 LGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDE 40 50 60 70 80 90 130 140 150 160 170 180 fk0250 FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 100 110 120 130 140 150 190 200 210 220 230 240 fk0250 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 160 170 180 190 200 210 250 260 270 280 290 300 fk0250 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSI 220 230 240 250 260 270 310 320 330 340 350 360 fk0250 THCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 THCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYA 280 290 300 310 320 330 370 380 390 400 410 420 fk0250 FRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFN :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|194 FRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFN 340 350 360 370 380 390 430 440 450 460 470 480 fk0250 RQQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RQQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADG 400 410 420 430 440 450 490 500 510 520 530 540 fk0250 DPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 DPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPA 460 470 480 490 500 510 550 560 570 580 590 600 fk0250 HLHVRSYSPDWPHQPNKTFAFISNQPGEGEANSTRATVPFPFDIKTLIIATTMGFISFLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 HLHVRSYSPDWPHQPNKTFAFISNQPGEGEANSTRATVPFPFDIKTLIIATTMGFISFLG 520 530 540 550 560 570 610 620 630 640 650 fk0250 VVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI :::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI 580 590 600 610 620 >>gi|33305422|gb|AAQ02775.1|AF373780_1 putative transmem (620 aa) initn: 4123 init1: 4123 opt: 4123 Z-score: 4623.1 bits: 865.7 E(): 0 Smith-Waterman score: 4123; 99.194% identity (100.000% similar) in 620 aa overlap (39-658:1-620) 10 20 30 40 50 60 fk0250 GGWAGAGAWSGRLERHAIGDRAERTEGAPEMQVSKRMLAGGVRSMPSPLLACWQPILLLV ::::.::::::.:::::::::::::::::: gi|333 MQVSERMLAGGMRSMPSPLLACWQPILLLV 10 20 30 70 80 90 100 110 120 fk0250 LGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 LGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDE 40 50 60 70 80 90 130 140 150 160 170 180 fk0250 FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 100 110 120 130 140 150 190 200 210 220 230 240 fk0250 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 160 170 180 190 200 210 250 260 270 280 290 300 fk0250 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSI 220 230 240 250 260 270 310 320 330 340 350 360 fk0250 THCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYA :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|333 THCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYA 280 290 300 310 320 330 370 380 390 400 410 420 fk0250 FRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFN :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|333 FRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFN 340 350 360 370 380 390 430 440 450 460 470 480 fk0250 RQQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADG ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|333 RQQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRAHIRDRKAQQVFVDEGHTVQFVCRADG 400 410 420 430 440 450 490 500 510 520 530 540 fk0250 DPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 DPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPA 460 470 480 490 500 510 550 560 570 580 590 600 fk0250 HLHVRSYSPDWPHQPNKTFAFISNQPGEGEANSTRATVPFPFDIKTLIIATTMGFISFLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 HLHVRSYSPDWPHQPNKTFAFISNQPGEGEANSTRATVPFPFDIKTLIIATTMGFISFLG 520 530 540 550 560 570 610 620 630 640 650 fk0250 VVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI :::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 VVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI 580 590 600 610 620 >>gi|119619602|gb|EAW99196.1| leucine rich repeat neuron (614 aa) initn: 4112 init1: 4112 opt: 4112 Z-score: 4610.9 bits: 863.4 E(): 0 Smith-Waterman score: 4112; 100.000% identity (100.000% similar) in 614 aa overlap (45-658:1-614) 20 30 40 50 60 70 fk0250 GAWSGRLERHAIGDRAERTEGAPEMQVSKRMLAGGVRSMPSPLLACWQPILLLVLGSVLS :::::::::::::::::::::::::::::: gi|119 MLAGGVRSMPSPLLACWQPILLLVLGSVLS 10 20 30 80 90 100 110 120 130 fk0250 GSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPH 40 50 60 70 80 90 140 150 160 170 180 190 fk0250 LEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV 100 110 120 130 140 150 200 210 220 230 240 250 fk0250 ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHG 160 170 180 190 200 210 260 270 280 290 300 310 fk0250 LIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT 220 230 240 250 260 270 320 330 340 350 360 370 fk0250 AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 280 290 300 310 320 330 380 390 400 410 420 430 fk0250 LRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTC 340 350 360 370 380 390 440 450 460 470 480 490 fk0250 ATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAI 400 410 420 430 440 450 500 510 520 530 540 550 fk0250 LWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRS 460 470 480 490 500 510 560 570 580 590 600 610 fk0250 YSPDWPHQPNKTFAFISNQPGEGEANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YSPDWPHQPNKTFAFISNQPGEGEANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCL 520 530 540 550 560 570 620 630 640 650 fk0250 VLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI :::::::::::::::::::::::::::::::::::::::::::: gi|119 VLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI 580 590 600 610 >>gi|74001023|ref|XP_544785.2| PREDICTED: similar to leu (620 aa) initn: 4110 init1: 4110 opt: 4110 Z-score: 4608.6 bits: 863.0 E(): 0 Smith-Waterman score: 4110; 98.710% identity (100.000% similar) in 620 aa overlap (39-658:1-620) 10 20 30 40 50 60 fk0250 GGWAGAGAWSGRLERHAIGDRAERTEGAPEMQVSKRMLAGGVRSMPSPLLACWQPILLLV ::::.::::::.:::::::::::::::::: gi|740 MQVSERMLAGGARSMPSPLLACWQPILLLV 10 20 30 70 80 90 100 110 120 fk0250 LGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 LGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDE 40 50 60 70 80 90 130 140 150 160 170 180 fk0250 FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|740 FASFPHLEELELNENIVSAVEPGAFNNLFSLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 100 110 120 130 140 150 190 200 210 220 230 240 fk0250 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 160 170 180 190 200 210 250 260 270 280 290 300 fk0250 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSI :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 LSHLHSLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSI 220 230 240 250 260 270 310 320 330 340 350 360 fk0250 THCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYA :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|740 THCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYA 280 290 300 310 320 330 370 380 390 400 410 420 fk0250 FRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFN :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|740 FRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFN 340 350 360 370 380 390 430 440 450 460 470 480 fk0250 RQQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 RQQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADG 400 410 420 430 440 450 490 500 510 520 530 540 fk0250 DPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 DPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPA 460 470 480 490 500 510 550 560 570 580 590 600 fk0250 HLHVRSYSPDWPHQPNKTFAFISNQPGEGEANSTRATVPFPFDIKTLIIATTMGFISFLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 HLHVRSYSPDWPHQPNKTFAFISNQPGEGEANSTRATVPFPFDIKTLIIATTMGFISFLG 520 530 540 550 560 570 610 620 630 640 650 fk0250 VVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI :::::::::::::::::::::::::::::::::::.:.:::::::::::: gi|740 VVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGVSAADAPRKFNMKMI 580 590 600 610 620 >>gi|75070887|sp|Q5RDJ4.1|LIGO1_PONAB Leucine-rich repea (614 aa) initn: 4103 init1: 4103 opt: 4103 Z-score: 4600.8 bits: 861.5 E(): 0 Smith-Waterman score: 4103; 99.837% identity (99.837% similar) in 614 aa overlap (45-658:1-614) 20 30 40 50 60 70 fk0250 GAWSGRLERHAIGDRAERTEGAPEMQVSKRMLAGGVRSMPSPLLACWQPILLLVLGSVLS :::::::::::::::::::::::::::::: gi|750 MLAGGVRSMPSPLLACWQPILLLVLGSVLS 10 20 30 80 90 100 110 120 130 fk0250 GSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 GSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPH 40 50 60 70 80 90 140 150 160 170 180 190 fk0250 LEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 LEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV 100 110 120 130 140 150 200 210 220 230 240 250 fk0250 ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHG 160 170 180 190 200 210 260 270 280 290 300 310 fk0250 LIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 LIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT 220 230 240 250 260 270 320 330 340 350 360 370 fk0250 AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 280 290 300 310 320 330 380 390 400 410 420 430 fk0250 LRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 LRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTC 340 350 360 370 380 390 440 450 460 470 480 490 fk0250 ATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 ATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAI 400 410 420 430 440 450 500 510 520 530 540 550 fk0250 LWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRS :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|750 LWLSPRKHLVSAKSNGRLTVFPGGTLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRS 460 470 480 490 500 510 560 570 580 590 600 610 fk0250 YSPDWPHQPNKTFAFISNQPGEGEANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 YSPDWPHQPNKTFAFISNQPGEGEANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCL 520 530 540 550 560 570 620 630 640 650 fk0250 VLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI :::::::::::::::::::::::::::::::::::::::::::: gi|750 VLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI 580 590 600 610 >>gi|75074561|sp|Q9N008.1|LIGO1_MACFA Leucine-rich repea (614 aa) initn: 4102 init1: 4102 opt: 4102 Z-score: 4599.6 bits: 861.3 E(): 0 Smith-Waterman score: 4102; 99.674% identity (99.837% similar) in 614 aa overlap (45-658:1-614) 20 30 40 50 60 70 fk0250 GAWSGRLERHAIGDRAERTEGAPEMQVSKRMLAGGVRSMPSPLLACWQPILLLVLGSVLS :::::::::::::::::::::::::::::: gi|750 MLAGGVRSMPSPLLACWQPILLLVLGSVLS 10 20 30 80 90 100 110 120 130 fk0250 GSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 GSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPH 40 50 60 70 80 90 140 150 160 170 180 190 fk0250 LEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 LEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV 100 110 120 130 140 150 200 210 220 230 240 250 fk0250 ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHG 160 170 180 190 200 210 260 270 280 290 300 310 fk0250 LIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 LIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT 220 230 240 250 260 270 320 330 340 350 360 370 fk0250 AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|750 AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAMVEPYAFRGLNY 280 290 300 310 320 330 380 390 400 410 420 430 fk0250 LRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 LRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTC 340 350 360 370 380 390 440 450 460 470 480 490 fk0250 ATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 ATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAI 400 410 420 430 440 450 500 510 520 530 540 550 fk0250 LWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 LWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRS 460 470 480 490 500 510 560 570 580 590 600 610 fk0250 YSPDWPHQPNKTFAFISNQPGEGEANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCL :::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: gi|750 YSPDWPHQPNKTFAFIPNQPGEGEANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCL 520 530 540 550 560 570 620 630 640 650 fk0250 VLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI :::::::::::::::::::::::::::::::::::::::::::: gi|750 VLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI 580 590 600 610 658 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Mon Aug 11 00:26:17 2008 done: Mon Aug 11 00:28:23 2008 Total Scan time: 938.300 Total Display time: 0.260 Function used was FASTA [version 34.26.5 April 26, 2007]