hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-00505847/chunk_1/iprscan-20080811-00505847.nocrc
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Query sequence: fk03255
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00322                                                 113.0    3.4e-29   2
SM00184                                                  29.6    0.00043   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00322    1/2     147   215 ..     1    63 []    46.2  4.4e-09
SM00322    2/2     242   309 ..     1    63 []    66.8  2.7e-15
SM00184    1/1     601   640 ..     1    23 []    29.6  0.00043

Alignments of top-scoring domains:
SM00322: domain 1 of 2, from 147 to 215: score 46.2, E = 4.4e-09
                   *->a.vtiev.ipa.dkvGriIGkgGstIkkieeetgvkIdipg...ert
                       + t+ v++p++++v+ i+G++G  Ik+++ +t++ I+ p +++e +
     fk03255   147    VnMTECVpVPSsEHVAEIVGRQGCKIKALRAKTNTYIKTPVrgeEPV 193  

                   vtItGppenvekAkelileile<-*
                   +++tG +e+v+ A+++i +  e   
     fk03255   194 FVVTGRKEDVAMARREIISAAE    215  

SM00322: domain 2 of 2, from 242 to 309: score 66.8, E = 2.7e-15
                   *->a.vtiev.ipadkvGriIGkgGstIkkieeetgvkIdipg...ertv
                       ++ti+v++p + vG+++G++G+tIk+i+++t + I+ p +++e ++
     fk03255   242    GqTTIQVrVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSrdkEPVF 288  

                   tItGppenvekAkelileile<-*
                   ++tG penv +A+e+i++ ++   
     fk03255   289 EVTGMPENVDRAREEIEAHIA    309  

SM00184: domain 1 of 1, from 601 to 640: score 29.6, E = 0.00043
                   *->CpICle....pvvlpCgH..FCr.Ci..........CPlC<-*
                      C++C+e++  + + pCgH+ FC +C ++  ++++++CP+C   
     fk03255   601    CSVCFEseviAALVPCGHnlFCMeCAnriceksepeCPVC    640  

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