hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080811/iprscan-20080811-00564246/chunk_1/iprscan-20080811-00564246.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: fk03260 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00613.10.fs Phosphoinositide 3-kinase family, acce 383.2 9.7e-113 1 PF00613.10.ls Phosphoinositide 3-kinase family, acce 385.0 1e-112 1 PF00454.17.ls Phosphatidylinositol 3- and 4-kinase 335.1 1.1e-97 1 PF00454.17.fs Phosphatidylinositol 3- and 4-kinase 333.5 3.4e-97 1 PF00794.9.ls PI3-kinase family, ras-binding domain 178.3 1.8e-50 1 PF00794.9.fs PI3-kinase family, ras-binding domain 176.3 7e-50 1 PF02192.6.ls PI3-kinase family, p85-binding domain 171.5 2e-48 1 PF00792.14.ls Phosphoinositide 3-kinase C2 169.9 6e-48 1 PF02192.6.fs PI3-kinase family, p85-binding domain 169.5 7.7e-48 1 PF00792.14.fs Phosphoinositide 3-kinase C2 168.1 2.1e-47 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF02192.6.fs 1/1 32 109 .. 1 80 [] 169.5 7.7e-48 PF02192.6.ls 1/1 32 109 .. 1 80 [] 171.5 2e-48 PF00794.9.ls 1/1 174 293 .. 1 116 [] 178.3 1.8e-50 PF00794.9.fs 1/1 174 293 .. 1 116 [] 176.3 7e-50 PF00792.14.ls 1/1 351 486 .. 1 179 [] 169.9 6e-48 PF00792.14.fs 1/1 351 486 .. 1 179 [] 168.1 2.1e-47 PF00613.10.fs 1/1 520 705 .. 1 213 [] 383.2 9.7e-113 PF00613.10.ls 1/1 520 705 .. 1 213 [] 385.0 1e-112 PF00454.17.fs 1/1 797 1016 .. 1 329 [] 333.5 3.4e-97 PF00454.17.ls 1/1 797 1016 .. 1 329 [] 335.1 1.1e-97 Alignments of top-scoring domains: PF02192.6.fs: domain 1 of 1, from 32 to 109: score 169.5, E = 7.7e-48 *->lveLrvsrEatlsvIKheLfkqakkmPlgtllkdaqsYvFvqvnqta +v+L+++rEatl +IKheLfk+a+k+Pl++ll+d++sY+Fv+v+q+a fk03260 32 IVTLECLREATLITIKHELFKEARKYPLHQLLQDESSYIFVSVTQEA 78 eiEelfDETrRLsdlrlfGTfPiLkLverdgtn<-* e+Ee+fDETrRL+dlrlf +P+Lk++e++g++ fk03260 79 EREEFFDETRRLCDLRLF--QPFLKVIEPVGNR 109 PF02192.6.ls: domain 1 of 1, from 32 to 109: score 171.5, E = 2e-48 *->lveLrvsrEatlsvIKheLfkqakkmPlgtllkdaqsYvFvqvnqta +v+L+++rEatl +IKheLfk+a+k+Pl++ll+d++sY+Fv+v+q+a fk03260 32 IVTLECLREATLITIKHELFKEARKYPLHQLLQDESSYIFVSVTQEA 78 eiEelfDETrRLsdlrlfGTfPiLkLverdgtn<-* e+Ee+fDETrRL+dlrlf +P+Lk++e++g++ fk03260 79 EREEFFDETRRLCDLRLF--QPFLKVIEPVGNR 109 PF00794.9.ls: domain 1 of 1, from 174 to 293: score 178.3, E = 1.8e-50 *->astlsPeplpnKlinnkllisvhlekrvknkqqtkTltcnpnsTpes +s+++P++++nKl++++++++++++++++n++q++Tl++n++++pe+ fk03260 174 SSPELPKHIYNKLDKGQIIVVIWVIVSPNNDKQKYTLKINHDCVPEQ 220 liaqaltKfakklsvltqndvtdee......dYvLKVcGrdEYLlgdhpL +ia+a++K k++s+l+++++ +++ + +++Y+LKVcG+dEY l+++pL fk03260 221 VIAEAIRK--KTRSMLLSSEQLKLCvleyqgKYILKVCGCDEYFLEKYPL 268 gqfeyIrnclksgrephLvLvesss<-* +q++yIr+c+++gr+p+L+L++++s fk03260 269 SQYKYIRSCIMLGRMPNLMLMAKES 293 PF00794.9.fs: domain 1 of 1, from 174 to 293: score 176.3, E = 7e-50 *->astlsPeplpnKlinnkllisvhlekrvknkqqtkTltcnpnsTpes +s+++P++++nKl++++++++++++++++n++q++Tl++n++++pe+ fk03260 174 SSPELPKHIYNKLDKGQIIVVIWVIVSPNNDKQKYTLKINHDCVPEQ 220 liaqaltKfakklsvltqndvtdee......dYvLKVcGrdEYLlgdhpL +ia+a++K k++s+l+++++ +++ + +++Y+LKVcG+dEY l+++pL fk03260 221 VIAEAIRK--KTRSMLLSSEQLKLCvleyqgKYILKVCGCDEYFLEKYPL 268 gqfeyIrnclksgrephLvLvesss<-* +q++yIr+c+++gr+p+L+L++++s fk03260 269 SQYKYIRSCIMLGRMPNLMLMAKES 293 PF00792.14.ls: domain 1 of 1, from 351 to 486: score 169.9, E = 6e-48 *->kysdlyvecslyDghggkpLclpvqsTsykpfskSlldgffssvkWn +++++yv+ ++y hgg+pLc++v +T+++p+s +++Wn fk03260 351 DIDKIYVRTGIY--HGGEPLCDNV-NTQRVPCS---------NPRWN 385 ewltFprikisdLPrdArLvltlyeisgksksesstdeiKldaneskkve ewl+++ i+i+dLPr+ArL+l++++++g ++ ++++++ fk03260 386 EWLNYD-IYIPDLPRAARLCLSICSVKGRKG------------AKEEHC- 421 plGwvnlsLFdkekgiLrqGpqlLsltWpskepdgsvptsTPGKvqlalr pl+w n++LFd+ ++L +G+++L+l Wp+ ++l+ fk03260 422 PLAWGNINLFDY-TDTLVSGKMALNL-WPVP---------------HGLE 454 delnrLekllkkyerGdvqsnpvvdwlDfltl<-* d+ln+++ + +++++++++ + ++dw+++++ fk03260 455 DLLNPIGVTGSNPNKETPCLELEFDWFSSVVK 486 PF00792.14.fs: domain 1 of 1, from 351 to 486: score 168.1, E = 2.1e-47 *->kysdlyvecslyDghggkpLclpvqsTsykpfskSlldgffssvkWn +++++yv+ ++y hgg+pLc++v +T+++p+s +++Wn fk03260 351 DIDKIYVRTGIY--HGGEPLCDNV-NTQRVPCS---------NPRWN 385 ewltFprikisdLPrdArLvltlyeisgksksesstdeiKldaneskkve ewl+++ i+i+dLPr+ArL+l++++++g ++ ++++++ fk03260 386 EWLNYD-IYIPDLPRAARLCLSICSVKGRKG------------AKEEHC- 421 plGwvnlsLFdkekgiLrqGpqlLsltWpskepdgsvptsTPGKvqlalr pl+w n++LFd+ ++L +G+++L+l Wp+ ++l+ fk03260 422 PLAWGNINLFDY-TDTLVSGKMALNL-WPVP---------------HGLE 454 delnrLekllkkyerGdvqsnpvvdwlDfltl<-* d+ln+++ + +++++++++ + ++dw+++++ fk03260 455 DLLNPIGVTGSNPNKETPCLELEFDWFSSVVK 486 PF00613.10.fs: domain 1 of 1, from 520 to 705: score 383.2, E = 9.7e-113 *->kdlkpNlnekerkeleaIlayDPlskLtaeEkdLiWkfRhysltsnP +d++ +e+++++l+aI ++DPls++t++Ekd++W++Rhy++ ++P fk03260 520 RDNEL--RENDKEQLKAISTRDPLSEITEQEKDFLWSHRHYCV-TIP 563 kALtLmCVGPKlLlLSVkWsdlsevaealsLldkRvWapidpvdALELLd ++L+ KlLl SVkW++++eva++++L+++ W+pi+p++A+ELLd fk03260 564 EILP------KLLL-SVKWNSRDEVAQMYCLVKD--WPPIKPEQAMELLD 604 pkFadkteeVReYAVkcLesYasDeELlfYLLQLVQALKYEnldepfhdS ++++d ++VR +AV+cLe+Y++D++L++YL+QLVQ+LKYE +++d+ fk03260 605 CNYPD--PMVRGFAVRCLEKYLTDDKLSQYLIQLVQVLKYE----QYLDN 648 pLsrFLlqRAlkNrsrlGHfFfWyLksEiYkDdeghdkdvIserFgvllE L+rFLl++Al+N+ r+GHfFfW+LksE+ h+k+v s+rFg+llE fk03260 649 LLVRFLLKKALTNQ-RIGHFFFWHLKSEM------HNKTV-SQRFGLLLE 690 sylrecdstsleglnk<-* sy+r+c +++l++ln+ fk03260 691 SYCRAC-GMYLKHLNR 705 PF00613.10.ls: domain 1 of 1, from 520 to 705: score 385.0, E = 1e-112 *->kdlkpNlnekerkeleaIlayDPlskLtaeEkdLiWkfRhysltsnP +d++ +e+++++l+aI ++DPls++t++Ekd++W++Rhy++ ++P fk03260 520 RDNEL--RENDKEQLKAISTRDPLSEITEQEKDFLWSHRHYCV-TIP 563 kALtLmCVGPKlLlLSVkWsdlsevaealsLldkRvWapidpvdALELLd ++L+ KlLl SVkW++++eva++++L+++ W+pi+p++A+ELLd fk03260 564 EILP------KLLL-SVKWNSRDEVAQMYCLVKD--WPPIKPEQAMELLD 604 pkFadkteeVReYAVkcLesYasDeELlfYLLQLVQALKYEnldepfhdS ++++d ++VR +AV+cLe+Y++D++L++YL+QLVQ+LKYE +++d+ fk03260 605 CNYPD--PMVRGFAVRCLEKYLTDDKLSQYLIQLVQVLKYE----QYLDN 648 pLsrFLlqRAlkNrsrlGHfFfWyLksEiYkDdeghdkdvIserFgvllE L+rFLl++Al+N+ r+GHfFfW+LksE+ h+k+v s+rFg+llE fk03260 649 LLVRFLLKKALTNQ-RIGHFFFWHLKSEM------HNKTV-SQRFGLLLE 690 sylrecdstsleglnk<-* sy+r+c +++l++ln+ fk03260 691 SYCRAC-GMYLKHLNR 705 PF00454.17.fs: domain 1 of 1, from 797 to 1016: score 333.5, E = 3.4e-97 *->gypfifKgGdDLrsrQDelvlQligVfKPkDEEPyApnNPkgtkvsq + +ifK+GdDLr QD+l+lQ+i fk03260 797 NNEIIFKNGDDLR--QDMLTLQII----------------------- 818 GerlmnkllkgegldrrRnlqltaYlviplgpgsGlIEwvpnsttlaeil r+m +++++ gld+r + +Y +++ g++ GlIE+v ns+t+++i+ fk03260 819 --RIMENIWQNQGLDLR----MLPYGCLSIGDCVGLIEVVRNSHTIMQIQ 862 rtymvkkaikdfnksrffkdkkttkkleknakllkehkllqmvldrkqlt ++ + k+a ++ fk03260 863 CKGGLKGALQFNS------------------------------------- 875 llekvevFeeklsntpkpgllqwFvkknpdaapyeewfeRfardnfvrSc + l+qw+++kn+ + ++++ a+d f+rSc fk03260 876 -----------------HTLHQWLKDKNKGE----IYDA--AIDLFTRSC 902 AgmsvldYiLGigDRHldNiLvkkndkktGklfHIDFGlcfghvkgkrgp Ag++v+++iLGigDRH++Ni+v k++G+lfHIDFG++++h k k+g fk03260 903 AGYCVATFILGIGDRHNSNIMV----KDDGQLFHIDFGHFLDHKKKKFGY 948 kpervPFrLTrWPQaklpmveamggyiasLgpsgdeglFrelceeayral k+ervPF+LT+ ++ ++ ++ +++ ++++++F+e+c++ay+a+ fk03260 949 KRERVPFVLTQ------DFLIVISKGAQECTKTREFERFQEMCYKAYLAI 992 RrnanlllnlLkkkAvarGelmledglpdwrs<-* R++anl++nl+ ++ml +g+p++ s fk03260 993 RQHANLFINLF--------SMMLGSGMPELQS 1016 PF00454.17.ls: domain 1 of 1, from 797 to 1016: score 335.1, E = 1.1e-97 *->gypfifKgGdDLrsrQDelvlQligVfKPkDEEPyApnNPkgtkvsq + +ifK+GdDLr QD+l+lQ+i fk03260 797 NNEIIFKNGDDLR--QDMLTLQII----------------------- 818 GerlmnkllkgegldrrRnlqltaYlviplgpgsGlIEwvpnsttlaeil r+m +++++ gld+r + +Y +++ g++ GlIE+v ns+t+++i+ fk03260 819 --RIMENIWQNQGLDLR----MLPYGCLSIGDCVGLIEVVRNSHTIMQIQ 862 rtymvkkaikdfnksrffkdkkttkkleknakllkehkllqmvldrkqlt ++ + k+a ++ fk03260 863 CKGGLKGALQFNS------------------------------------- 875 llekvevFeeklsntpkpgllqwFvkknpdaapyeewfeRfardnfvrSc + l+qw+++kn+ + ++++ a+d f+rSc fk03260 876 -----------------HTLHQWLKDKNKGE----IYDA--AIDLFTRSC 902 AgmsvldYiLGigDRHldNiLvkkndkktGklfHIDFGlcfghvkgkrgp Ag++v+++iLGigDRH++Ni+v k++G+lfHIDFG++++h k k+g fk03260 903 AGYCVATFILGIGDRHNSNIMV----KDDGQLFHIDFGHFLDHKKKKFGY 948 kpervPFrLTrWPQaklpmveamggyiasLgpsgdeglFrelceeayral k+ervPF+LT+ ++ ++ ++ +++ ++++++F+e+c++ay+a+ fk03260 949 KRERVPFVLTQ------DFLIVISKGAQECTKTREFERFQEMCYKAYLAI 992 RrnanlllnlLkkkAvarGelmledglpdwrs<-* R++anl++nl+ ++ml +g+p++ s fk03260 993 RQHANLFINLF--------SMMLGSGMPELQS 1016 //