hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-01222048/chunk_1/iprscan-20080811-01222048.nocrc
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Query sequence: fk03930
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N 
--------       -----------                              -----    ------- ---
PF01532.11.fs  Glycosyl hydrolase family 47             219.7    6.2e-63   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
PF01532.11.fs    1/1      17   181 ..   316   518 .]   219.7  6.2e-63

Alignments of top-scoring domains:
PF01532.11.fs: domain 1 of 1, from 17 to 181: score 219.7, E = 6.2e-63
                   *->GlfalgadsldaffpgEvlqvlegdkeiaitcHemYdrtwtklGpep
                      G++alg  + ++       +++e++ e+ +tc++m  +++t+l pe+
     fk03930    17    GTLALGVYHGLP------ASHMELAQELMETCYQMNRQMETGLSPEI 57   

                   frFneaveksdqlslyeaaavkvlellafypLRPEviEStyyLYRNIaTk
                   ++Fn  +++        + +vk+ +  ++++LRPE++ES +yLYR  +T+
     fk03930    58 VHFNLYPQPGRR-----DVEVKPAD--RHNLLRPETVESLFYLYR--VTG 98   

                   dpkmPTTNEYrewgweavqalekycRvkcGgglssRyaglrnVytksigs
                   d k      Y++wgwe++q++   +Rv++Gg     y++++n  ++ + +
     fk03930    99 DRK------YQDWGWEILQSFSRFTRVPSGG-----YSSINNAQDPQKPE 137  

                   keDrMESFfLAETlKYLYLlFdddnalqvellpldkctdevqgnwVFNTE
                    +D+MESFfL ETlKYL LlF+dd     +ll+ld         +VFNTE
     fk03930   138 PRDKMESFFLGETLKYLFLLFSDDP----NLLSLDA--------YVFNTE 175  

                   AHPlpi<-*
                   AHPlpi   
     fk03930   176 AHPLPI    181  

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