hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20090618/iprscan-20090618-11350456/chunk_1/iprscan-20090618-11350456.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: fk04190 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00149.18.ls Calcineurin-like phosphoesterase 155.8 1e-43 1 PF00149.18.fs Calcineurin-like phosphoesterase 153.8 4.1e-43 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00149.18.fs 1/1 85 280 .. 1 124 [] 153.8 4.1e-43 PF00149.18.ls 1/1 85 280 .. 1 124 [] 155.8 1e-43 Alignments of top-scoring domains: PF00149.18.fs: domain 1 of 1, from 85 to 280: score 153.8, E = 4.1e-43 *->mrilvigDlHggfedlllllela.e.kpdlvlflGDlvdrgppslev ++ ++gD+Hg++ dll+l+e ++ ++ ++lflGD+vdrg++sle+ fk04190 85 APLKICGDIHGQYTDLLRLFEYGgFpPEANYLFLGDYVDRGKQSLET 131 llllfalklkapgpvylvrGNHDfdsgnsvl..............w.efl ++ll+a+k+k+p +++l+rGNH+++s+n+ +++++ +++++ + w++f fk04190 132 ICLLLAYKIKYPENFFLLRGNHECASINRIYgfydeckrrfniklWkTFT 181 ell.lllla.lvdgkillvHgplspd........................ + +++l+ a +vd ki+++Hg+lspd + + ++ ++ + ++ + + fk04190 182 DCFnCLPIAaIVDEKIFCCHGGLSPDlqsmeqirrimrptdvpdtgllcd 231 ............................leellk.ngvdlvirGHtHvp< +++++++ ++++++++ + + + + ++l ++++dl++r+H+ v+ fk04190 232 llwsdpdkdvqgwgendrgvsftfgadvVSKFLNrHDLDLICRAHQVVE 280 -* fk04190 - - PF00149.18.ls: domain 1 of 1, from 85 to 280: score 155.8, E = 1e-43 *->mrilvigDlHggfedlllllela.e.kpdlvlflGDlvdrgppslev ++ ++gD+Hg++ dll+l+e ++ ++ ++lflGD+vdrg++sle+ fk04190 85 APLKICGDIHGQYTDLLRLFEYGgFpPEANYLFLGDYVDRGKQSLET 131 llllfalklkapgpvylvrGNHDfdsgnsvl..............w.efl ++ll+a+k+k+p +++l+rGNH+++s+n+ +++++ +++++ + w++f fk04190 132 ICLLLAYKIKYPENFFLLRGNHECASINRIYgfydeckrrfniklWkTFT 181 ell.lllla.lvdgkillvHgplspd........................ + +++l+ a +vd ki+++Hg+lspd + + ++ ++ + ++ + + fk04190 182 DCFnCLPIAaIVDEKIFCCHGGLSPDlqsmeqirrimrptdvpdtgllcd 231 ............................leellk.ngvdlvirGHtHvp< +++++++ ++++++++ + + + + ++l ++++dl++r+H+ v+ fk04190 232 llwsdpdkdvqgwgendrgvsftfgadvVSKFLNrHDLDLICRAHQVVE 280 -* fk04190 - - //