hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-11350456/chunk_1/iprscan-20090618-11350456.nocrc
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Query sequence: fk04190
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00156                                                 562.6   1.5e-164   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00156    1/1      58   328 ..     1   321 []   562.6 1.5e-164

Alignments of top-scoring domains:
SM00156: domain 1 of 1, from 58 to 328: score 562.6, E = 1.5e-164
                   *->lseeeilellrevkeilrqepnlvevsetetaPvtvcGDiHGQfdDL
                      ++e e++ l+ +++ei+ ++p l+e++    aP ++cGDiHGQ+ DL
     fk04190    58    MTEAEVRGLCIKSREIFLSQPILLELE----APLKICGDIHGQYTDL 100  

                   lrlfkKeelnglpppdtnYlFLGDYVDRGpfSiEvilLLfalKilyPnri
                   lrlf   e +g +pp+ nYlFLGDYVDRG++S+E+i+LL+a+Ki+yP+++
     fk04190   101 LRLF---EYGG-FPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENF 146  

                   fLLRGNHEsrsiNmWvkiYGFydEckrkydgariykiFneaFswLPlaAL
                   fLLRGNHE+ siN   +iYGFydEckr+  + +++k F+++F++LP+aA+
     fk04190   147 FLLRGNHECASIN---RIYGFYDECKRRF-NIKLWKTFTDCFNCLPIAAI 192  

                   ignkiLCMHGGLSplEsdtldlttLddirkldRpqippqeppddglliDL
                   ++ ki+C HGGLSp      dl++ ++ir++ R    p + pd gll+DL
     fk04190   193 VDEKIFCCHGGLSP------DLQSMEQIRRIMR----PTDVPDTGLLCDL 232  

                   LWsDPvdlelirddqsvpgwgpskvRGasyvFGpdvvdeFlkknnLklIi
                   LWsDP        d++v+gwg +  RG+s++FG+dvv++Fl++++L+lI+
     fk04190   233 LWSDP--------DKDVQGWGEND-RGVSFTFGADVVSKFLNRHDLDLIC 273  

                   RaHqvvdvqmpdGYeffadgdgrvkkLvTiFSAPnYcgqfgNaaAvlkvn
                   RaHqvv+    dGYeffa++     +LvT+FSAPnYcg+f+Na+ +++v 
     fk04190   274 RAHQVVE----DGYEFFAKR-----QLVTLFSAPNYCGEFDNAGGMMSV- 313  

                   dekviqykrdknlklsfvqfkpak<-*
                            d+ l++sf+ +kp +   
     fk04190   314 ---------DETLMCSFQILKPSE    328  

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