hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-02282672/chunk_1/iprscan-20080811-02282672.nocrc
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Query sequence: fk04706
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00836.9.fs Stathmin family                                123.3    1.2e-34   1
PF00836.9.ls Stathmin family                                 74.1    4.1e-19   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00836.9.fs   1/1      26    88 ..     1    63 [.   123.3  1.2e-34
PF00836.9.ls   1/1      26   130 ..     1   140 []    74.1  4.1e-19

Alignments of top-scoring domains:
PF00836.9.fs: domain 1 of 1, from 26 to 88: score 123.3, E = 1.2e-34
                   *->sDievkeleKrasGqaFEliLkPpskdsvpelslssPkkkdlsLEEi
                      sDi+vkeleKrasGqaFEliL+P+sk+svpe++ls+PkkkdlsLEEi
     fk04706    26    SDIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEI 72   

                   qKKLEAAEERRKsqEA<-*
                   qKKLEAAEERRK++EA   
     fk04706    73 QKKLEAAEERRKVNEA    88   

PF00836.9.ls: domain 1 of 1, from 26 to 130: score 74.1, E = 4.1e-19
                   *->sDievkeleKrasGqaFEliLkPpskdsvpelslssPkkkdlsLEEi
                      sDi+vkeleKrasGqaFEliL+P+sk+svpe++ls+PkkkdlsLEEi
     fk04706    26    SDIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEI 72   

                   qKKLEAAEERRKsqEAevLKqLAEKREHEkEvlqKAiEEnnnFsKmAeEK
                   qKKLEAAEERRK++EA                                  
     fk04706    73 QKKLEAAEERRKVNEA---------------------------------- 88   

                   LtqKmEsiKEnREAqlAAklERLrEKdkhveEvRknKElkeea<-*
                   + +K + +  n   ++  +  R +     v  +    + ke     
     fk04706    89 IHRKQDINLCNGQINFISITGRKQNCSYTVI-ITYASDWKEIP    130  

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