# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofk04920.fasta.nr -Q fk04920.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fk04920, 352 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6836842 sequences Expectation_n fit: rho(ln(x))= 5.5497+/-0.000193; mu= 8.8857+/- 0.011 mean_var=95.9512+/-18.304, 0's: 43 Z-trim: 62 B-trim: 94 in 2/63 Lambda= 0.130933 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62088148|dbj|BAD92521.1| tripartite motif-conta ( 352) 2373 458.2 1e-126 gi|14043332|gb|AAH07661.1| TRIM39 protein [Homo sa ( 488) 2192 424.1 2.5e-116 gi|30584093|gb|AAP36295.1| Homo sapiens tripartite ( 489) 2192 424.1 2.5e-116 gi|56805544|dbj|BAD83393.1| tripartite motif-conta ( 488) 2188 423.4 4.2e-116 gi|194223290|ref|XP_001492226.2| PREDICTED: simila ( 487) 2184 422.6 7.1e-116 gi|67969808|dbj|BAE01252.1| unnamed protein produc ( 488) 2183 422.4 8.1e-116 gi|73972054|ref|XP_538824.2| PREDICTED: similar to ( 488) 2178 421.5 1.6e-115 gi|194040114|ref|XP_001929611.1| PREDICTED: simila ( 488) 2174 420.7 2.6e-115 gi|55727162|emb|CAH90337.1| hypothetical protein [ ( 488) 2167 419.4 6.6e-115 gi|18202875|sp|Q9ESN2|TRI39_MOUSE Tripartite motif ( 488) 2129 412.2 9.6e-113 gi|56404683|sp|Q6MFZ5|TRI39_RAT Tripartite motif-c ( 488) 2126 411.6 1.4e-112 gi|21594157|gb|AAH31540.1| Trim39 protein [Mus mus ( 496) 2103 407.3 2.9e-111 gi|126309495|ref|XP_001368421.1| PREDICTED: simila ( 487) 2032 393.9 3.1e-107 gi|151303757|gb|ABR92635.1| TRIM39-like protein [H ( 415) 1840 357.6 2.3e-96 gi|73972056|ref|XP_855659.1| PREDICTED: similar to ( 498) 1620 316.1 8.5e-84 gi|74141689|dbj|BAE38597.1| unnamed protein produc ( 388) 1504 294.1 2.8e-77 gi|115311877|sp|Q1XHU0|TRI39_PANTR Tripartite moti ( 518) 1386 271.9 1.8e-70 gi|46091149|dbj|BAD13703.1| TRIM39 protein [Homo s ( 518) 1386 271.9 1.8e-70 gi|56405385|sp|Q9HCM9|TRI39_HUMAN Tripartite motif ( 518) 1386 271.9 1.8e-70 gi|10716076|dbj|BAB16374.1| testis-abundant finger ( 518) 1380 270.8 3.9e-70 gi|90960952|dbj|BAE92829.1| tripartite motif-conta ( 518) 1378 270.4 5.1e-70 gi|123270108|emb|CAM25558.1| tripartite motif-cont ( 226) 1359 266.5 3.3e-69 gi|123270107|emb|CAM25557.1| tripartite motif-cont ( 261) 1340 262.9 4.5e-68 gi|26343505|dbj|BAC35409.1| unnamed protein produc ( 264) 1283 252.2 7.8e-65 gi|149412073|ref|XP_001509541.1| PREDICTED: simila ( 527) 1264 248.9 1.6e-63 gi|126331415|ref|XP_001374079.1| PREDICTED: simila ( 468) 1153 227.8 2.9e-57 gi|194208343|ref|XP_001498128.2| PREDICTED: simila ( 471) 969 193.1 8.5e-47 gi|149698328|ref|XP_001498222.1| PREDICTED: simila ( 470) 955 190.4 5.3e-46 gi|26400672|sp|Q96F44|TRI11_HUMAN Tripartite motif ( 468) 942 188.0 2.9e-45 gi|189069463|dbj|BAG37129.1| unnamed protein produ ( 468) 940 187.6 3.8e-45 gi|109017929|ref|XP_001082465.1| PREDICTED: simila ( 468) 932 186.1 1.1e-44 gi|148356959|dbj|BAF62983.1| Tripartite motif prot ( 588) 925 184.9 3.2e-44 gi|169730356|gb|ACA64757.1| tripartite motif prote ( 463) 902 180.4 5.4e-43 gi|187663991|sp|A6NK02.2|TRI75_HUMAN Tripartite mo ( 468) 899 179.9 8.1e-43 gi|55623462|ref|XP_526718.1| PREDICTED: similar to ( 468) 899 179.9 8.1e-43 gi|126309389|ref|XP_001372311.1| PREDICTED: simila ( 627) 900 180.2 8.8e-43 gi|109076582|ref|XP_001117920.1| PREDICTED: simila ( 506) 896 179.3 1.3e-42 gi|148356961|dbj|BAF62985.1| Tripartite motif prot ( 463) 895 179.1 1.4e-42 gi|169642491|gb|AAI60894.1| Trim11 protein [Rattus ( 467) 884 177.0 5.8e-42 gi|73975418|ref|XP_848259.1| PREDICTED: similar to ( 468) 880 176.3 9.8e-42 gi|117306598|gb|AAI26549.1| Tripartite motif-conta ( 468) 879 176.1 1.1e-41 gi|26400680|sp|Q99PQ2|TRI11_MOUSE Tripartite motif ( 467) 876 175.5 1.6e-41 gi|55623460|ref|XP_526717.1| PREDICTED: ring finge ( 471) 872 174.8 2.8e-41 gi|41016417|dbj|BAD07472.1| hypothetical protein [ ( 630) 873 175.1 3e-41 gi|123983410|gb|ABM83446.1| tripartite motif-conta ( 545) 870 174.4 4e-41 gi|48257198|gb|AAH18765.2| TRIM41 protein [Homo sa ( 552) 870 174.4 4.1e-41 gi|116242826|sp|Q8WV44|TRI41_HUMAN Tripartite moti ( 630) 870 174.5 4.5e-41 gi|109080185|ref|XP_001104219.1| PREDICTED: simila ( 544) 869 174.2 4.6e-41 gi|71681736|gb|AAI00986.1| Tripartite motif-contai ( 471) 861 172.7 1.2e-40 gi|114154820|sp|Q495X7|TRI60_HUMAN Tripartite moti ( 471) 861 172.7 1.2e-40 >>gi|62088148|dbj|BAD92521.1| tripartite motif-containin (352 aa) initn: 2373 init1: 2373 opt: 2373 Z-score: 2430.3 bits: 458.2 E(): 1e-126 Smith-Waterman score: 2373; 100.000% identity (100.000% similar) in 352 aa overlap (1-352:1-352) 10 20 30 40 50 60 fk0492 LERDFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LERDFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCY 10 20 30 40 50 60 70 80 90 100 110 120 fk0492 EDQEAVCLICAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EDQEAVCLICAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKP 70 80 90 100 110 120 130 140 150 160 170 180 fk0492 GELKRLVESRRQQILREFEELHRRLDEEQQVLLSRLEEEEQDILQRLRENAAHLGDKRRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GELKRLVESRRQQILREFEELHRRLDEEQQVLLSRLEEEEQDILQRLRENAAHLGDKRRD 130 140 150 160 170 180 190 200 210 220 230 240 fk0492 LAHLAAEVEGKCLQSGFEMLKDVKSTLEKCEKVKTMEVTSVSIELEKNFSNFPRQYFALR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LAHLAAEVEGKCLQSGFEMLKDVKSTLEKCEKVKTMEVTSVSIELEKNFSNFPRQYFALR 190 200 210 220 230 240 250 260 270 280 290 300 fk0492 KILKQLIADVTLDPETAHPNLVLSEDRKSVKFVETRLRDLPDTPRRFTFYPCVLATEGFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 KILKQLIADVTLDPETAHPNLVLSEDRKSVKFVETRLRDLPDTPRRFTFYPCVLATEGFT 250 260 270 280 290 300 310 320 330 340 350 fk0492 SGRHYWEVEVGDKTHWAVGVCRDSVSRKGGCGYGMGTNMQPPPHLLPLCTSR :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SGRHYWEVEVGDKTHWAVGVCRDSVSRKGGCGYGMGTNMQPPPHLLPLCTSR 310 320 330 340 350 >>gi|14043332|gb|AAH07661.1| TRIM39 protein [Homo sapien (488 aa) initn: 2192 init1: 2192 opt: 2192 Z-score: 2243.6 bits: 424.1 E(): 2.5e-116 Smith-Waterman score: 2192; 100.000% identity (100.000% similar) in 329 aa overlap (1-329:60-388) 10 20 30 fk0492 LERDFPCPVCRKTSRYRSLRPNRQLGSMVE :::::::::::::::::::::::::::::: gi|140 SVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVE 30 40 50 60 70 80 40 50 60 70 80 90 fk0492 IAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|140 IAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQE 90 100 110 120 130 140 100 110 120 130 140 150 fk0492 YKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|140 YKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQ 150 160 170 180 190 200 160 170 180 190 200 210 fk0492 VLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|140 VLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKC 210 220 230 240 250 260 220 230 240 250 260 270 fk0492 EKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|140 EKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSV 270 280 290 300 310 320 280 290 300 310 320 330 fk0492 KFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|140 KFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGE 330 340 350 360 370 380 340 350 fk0492 CGYGMGTNMQPPPHLLPLCTSR gi|140 LTPLPETGYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSH 390 400 410 420 430 440 >>gi|30584093|gb|AAP36295.1| Homo sapiens tripartite mot (489 aa) initn: 2192 init1: 2192 opt: 2192 Z-score: 2243.6 bits: 424.1 E(): 2.5e-116 Smith-Waterman score: 2192; 100.000% identity (100.000% similar) in 329 aa overlap (1-329:60-388) 10 20 30 fk0492 LERDFPCPVCRKTSRYRSLRPNRQLGSMVE :::::::::::::::::::::::::::::: gi|305 SVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVE 30 40 50 60 70 80 40 50 60 70 80 90 fk0492 IAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 IAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQE 90 100 110 120 130 140 100 110 120 130 140 150 fk0492 YKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 YKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQ 150 160 170 180 190 200 160 170 180 190 200 210 fk0492 VLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 VLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKC 210 220 230 240 250 260 220 230 240 250 260 270 fk0492 EKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 EKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSV 270 280 290 300 310 320 280 290 300 310 320 330 fk0492 KFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 KFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGE 330 340 350 360 370 380 340 350 fk0492 CGYGMGTNMQPPPHLLPLCTSR gi|305 LTPLPETGYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSH 390 400 410 420 430 440 >>gi|56805544|dbj|BAD83393.1| tripartite motif-containin (488 aa) initn: 2188 init1: 2188 opt: 2188 Z-score: 2239.5 bits: 423.4 E(): 4.2e-116 Smith-Waterman score: 2188; 99.696% identity (100.000% similar) in 329 aa overlap (1-329:60-388) 10 20 30 fk0492 LERDFPCPVCRKTSRYRSLRPNRQLGSMVE :::::::::::::::::::::::::::::: gi|568 SVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVE 30 40 50 60 70 80 40 50 60 70 80 90 fk0492 IAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 IAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQE 90 100 110 120 130 140 100 110 120 130 140 150 fk0492 YKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQ :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|568 YKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILKEFEELHRRLDEEQQ 150 160 170 180 190 200 160 170 180 190 200 210 fk0492 VLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 VLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKC 210 220 230 240 250 260 220 230 240 250 260 270 fk0492 EKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 EKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSV 270 280 290 300 310 320 280 290 300 310 320 330 fk0492 KFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 KFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGE 330 340 350 360 370 380 340 350 fk0492 CGYGMGTNMQPPPHLLPLCTSR gi|568 LTPLPETGYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSH 390 400 410 420 430 440 >>gi|194223290|ref|XP_001492226.2| PREDICTED: similar to (487 aa) initn: 2184 init1: 2184 opt: 2184 Z-score: 2235.5 bits: 422.6 E(): 7.1e-116 Smith-Waterman score: 2184; 99.392% identity (100.000% similar) in 329 aa overlap (1-329:60-388) 10 20 30 fk0492 LERDFPCPVCRKTSRYRSLRPNRQLGSMVE :::::::::::::::::::::::::::::: gi|194 SVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVE 30 40 50 60 70 80 40 50 60 70 80 90 fk0492 IAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 IAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQE 90 100 110 120 130 140 100 110 120 130 140 150 fk0492 YKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQ :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|194 YKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILKEFEELHRRLDEEQQ 150 160 170 180 190 200 160 170 180 190 200 210 fk0492 VLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKC .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKC 210 220 230 240 250 260 220 230 240 250 260 270 fk0492 EKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 EKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSV 270 280 290 300 310 320 280 290 300 310 320 330 fk0492 KFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGE 330 340 350 360 370 380 340 350 fk0492 CGYGMGTNMQPPPHLLPLCTSR gi|194 LTPLPETGYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGILDYEAGTLSFYNVTDRSHI 390 400 410 420 430 440 >>gi|67969808|dbj|BAE01252.1| unnamed protein product [M (488 aa) initn: 2183 init1: 2183 opt: 2183 Z-score: 2234.4 bits: 422.4 E(): 8.1e-116 Smith-Waterman score: 2183; 99.696% identity (99.696% similar) in 329 aa overlap (1-329:60-388) 10 20 30 fk0492 LERDFPCPVCRKTSRYRSLRPNRQLGSMVE :::::::::::::::::::::::::::::: gi|679 SVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVE 30 40 50 60 70 80 40 50 60 70 80 90 fk0492 IAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 IAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQE 90 100 110 120 130 140 100 110 120 130 140 150 fk0492 YKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 YKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQ 150 160 170 180 190 200 160 170 180 190 200 210 fk0492 VLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 VLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKC 210 220 230 240 250 260 220 230 240 250 260 270 fk0492 EKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSV :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 EKVKTMGVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSV 270 280 290 300 310 320 280 290 300 310 320 330 fk0492 KFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 KFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGE 330 340 350 360 370 380 340 350 fk0492 CGYGMGTNMQPPPHLLPLCTSR gi|679 LTPLPETGYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSH 390 400 410 420 430 440 >>gi|73972054|ref|XP_538824.2| PREDICTED: similar to tri (488 aa) initn: 2178 init1: 2178 opt: 2178 Z-score: 2229.3 bits: 421.5 E(): 1.6e-115 Smith-Waterman score: 2178; 99.088% identity (99.696% similar) in 329 aa overlap (1-329:60-388) 10 20 30 fk0492 LERDFPCPVCRKTSRYRSLRPNRQLGSMVE :::::::::::::::::::::::::::::: gi|739 SVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVE 30 40 50 60 70 80 40 50 60 70 80 90 fk0492 IAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 IAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQE 90 100 110 120 130 140 100 110 120 130 140 150 fk0492 YKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQ :::::::::::::::::::::::::::::::::::::: ::::::.:::::::::::::: gi|739 YKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVECRRQQILKEFEELHRRLDEEQQ 150 160 170 180 190 200 160 170 180 190 200 210 fk0492 VLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKC .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKC 210 220 230 240 250 260 220 230 240 250 260 270 fk0492 EKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 EKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSV 270 280 290 300 310 320 280 290 300 310 320 330 fk0492 KFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGE 330 340 350 360 370 380 340 350 fk0492 CGYGMGTNMQPPPHLLPLCTSR gi|739 LTPLPETGYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSH 390 400 410 420 430 440 >>gi|194040114|ref|XP_001929611.1| PREDICTED: similar to (488 aa) initn: 2174 init1: 2174 opt: 2174 Z-score: 2225.3 bits: 420.7 E(): 2.6e-115 Smith-Waterman score: 2174; 99.088% identity (99.696% similar) in 329 aa overlap (1-329:60-388) 10 20 30 fk0492 LERDFPCPVCRKTSRYRSLRPNRQLGSMVE :::::::::::::::::::::::::::::: gi|194 SVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVE 30 40 50 60 70 80 40 50 60 70 80 90 fk0492 IAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 IAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQE 90 100 110 120 130 140 100 110 120 130 140 150 fk0492 YKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQ :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|194 YKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILKEFEELHRRLDEEQQ 150 160 170 180 190 200 160 170 180 190 200 210 fk0492 VLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKC 210 220 230 240 250 260 220 230 240 250 260 270 fk0492 EKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSV ::::::::::::::::::::::::::::::::::: .::::::::::::::::::::::: gi|194 EKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQPFADVTLDPETAHPNLVLSEDRKSV 270 280 290 300 310 320 280 290 300 310 320 330 fk0492 KFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGE 330 340 350 360 370 380 340 350 fk0492 CGYGMGTNMQPPPHLLPLCTSR gi|194 LTPLPETGYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSH 390 400 410 420 430 440 >>gi|55727162|emb|CAH90337.1| hypothetical protein [Pong (488 aa) initn: 2167 init1: 2167 opt: 2167 Z-score: 2218.1 bits: 419.4 E(): 6.6e-115 Smith-Waterman score: 2167; 99.088% identity (99.392% similar) in 329 aa overlap (1-329:60-388) 10 20 30 fk0492 LERDFPCPVCRKTSRYRSLRPNRQLGSMVE :::::::::::::::::::::::::::::: gi|557 SVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVE 30 40 50 60 70 80 40 50 60 70 80 90 fk0492 IAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 IAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQE 90 100 110 120 130 140 100 110 120 130 140 150 fk0492 YKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQ :::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: gi|557 YKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILREFGELHRRLDEEQQ 150 160 170 180 190 200 160 170 180 190 200 210 fk0492 VLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKC :::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: gi|557 VLLSRLEEEEQDILQRPRENAAHLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKC 210 220 230 240 250 260 220 230 240 250 260 270 fk0492 EKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 EKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSV 270 280 290 300 310 320 280 290 300 310 320 330 fk0492 KFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGG ::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|557 KFVETRLRDLPDTPRRLTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGE 330 340 350 360 370 380 340 350 fk0492 CGYGMGTNMQPPPHLLPLCTSR gi|557 LTPLPETGYWRVRLWNGDKYAVTTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSH 390 400 410 420 430 440 >>gi|18202875|sp|Q9ESN2|TRI39_MOUSE Tripartite motif-con (488 aa) initn: 2129 init1: 2129 opt: 2129 Z-score: 2179.3 bits: 412.2 E(): 9.6e-113 Smith-Waterman score: 2129; 96.657% identity (98.784% similar) in 329 aa overlap (1-329:60-388) 10 20 30 fk0492 LERDFPCPVCRKTSRYRSLRPNRQLGSMVE :::::::::::::::::::::::::::::: gi|182 SVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVE 30 40 50 60 70 80 40 50 60 70 80 90 fk0492 IAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQE ::::::.::::::::::: :::: ::::::::::::::::::::::: :::::.:::::: gi|182 IAKQLQTVKRKIRDESLCSQHHEPLSLFCYEDQEAVCLICAISHTHRPHTVVPMDDATQE 90 100 110 120 130 140 100 110 120 130 140 150 fk0492 YKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQ :::::::::::::::::::: ::.:::::::::::::::::::::.:::::::::::::: gi|182 YKEKLQKCLEPLEQKLQEITCCKASEEKKPGELKRLVESRRQQILKEFEELHRRLDEEQQ 150 160 170 180 190 200 160 170 180 190 200 210 fk0492 VLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKC .:::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|182 TLLSRLEEEEQDILQRLRENAAHLGDRRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKC 210 220 230 240 250 260 220 230 240 250 260 270 fk0492 EKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 EKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSV 270 280 290 300 310 320 280 290 300 310 320 330 fk0492 KFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGG ::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|182 KFVETRLRDLPDTPQRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGE 330 340 350 360 370 380 340 350 fk0492 CGYGMGTNMQPPPHLLPLCTSR gi|182 LTPLPETGYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSH 390 400 410 420 430 440 352 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Mon Aug 11 02:56:42 2008 done: Mon Aug 11 02:59:15 2008 Total Scan time: 773.920 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]