hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-12053314/chunk_1/iprscan-20090618-12053314.nocrc
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Query sequence: fk05467
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00430                                                 172.0      6e-47   1
SM00399                                                 146.2    3.5e-39   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00399    1/1     150   221 ..     1    72 []   146.2  3.5e-39
SM00430    1/1     288   448 ..     1   158 []   172.0    6e-47

Alignments of top-scoring domains:
SM00399: domain 1 of 1, from 150 to 221: score 146.2, E = 3.5e-39
                   *->sepCaVCgdpAsGyHfGvlsCrACkaFFRRtvvlkkkYkCkknnnCe
                      +  C+VCgd++sG+H+G ++C++Ck+FF+R+v+++++Y+C++n+nC+
     fk05467   150    HIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCP 196  

                   idkkgRnrCRaCRlkKClevGMnpe<-*
                   id ++Rn+C++CRlkKCl+vGM++e   
     fk05467   197 IDQHHRNQCQYCRLKKCLKVGMRRE    221  

SM00430: domain 1 of 1, from 288 to 448: score 172.0, E = 6e-47
                   *->ewwerdllltvewaksfpfFreLsleDqiiLLksfwfelllLesayr
                      e++ r l+++vewa+++pfF +L + Dq++LL+ +w+el++L+ a++
     fk05467   288    ELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQC 334  

                   sa.lkksdlllfpdgtyirpd....lf.pfldrildelv.plreLkltde
                   s++l+   ll + ++  ++++ ++ +  ++++ri++e v++l+ L+++  
     fk05467   335 SMpLHVAPLLAAAGLHASPMSadrvVAfMDHIRIFQEQVeKLKALHVDSA 384  

                   EyalLkaillfnpagpglseegqeiveklqeklsnaLhdYylknypmpny
                   Ey++Lkai+lf ++++gls+    ++e+lqek + aL +Y++++yp  n+
     fk05467   385 EYSCLKAIVLFTSDACGLSD--AAHIESLQEKSQCALEEYVRSQYP--NQ 430  

                   psRfakLllllpslrkis<-*
                   psRf+kLll+lpslr++s   
     fk05467   431 PSRFGKLLLRLPSLRTVS    448  

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