hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20090618/iprscan-20090618-12334597/chunk_1/iprscan-20090618-12334597.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: fk06583 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00326 95.2 7.7e-24 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00326 1/1 505 560 .] 1 58 [] 95.2 7.7e-24 Alignments of top-scoring domains: SM00326: domain 1 of 1, from 505 to 560: score 95.2, E = 7.7e-24 *->eyvvAlYDyeaqnedELsFkkGDiitvleksddgWweGelnrtGkeG ++vAlYDy+a ++dE+sF ++Diit +e +ddgWw+G ++ G+ G fk06583 505 ITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCK--GRYG 549 lfPsnYVeeie<-* lfP+nYVe+ + fk06583 550 LFPANYVELRQ 560 //