hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-04150803/chunk_1/iprscan-20080811-04150803.nocrc
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Query sequence: fk06592
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00225.13.ls Kinesin motor domain                           541.2     1e-159   1
PF00225.13.fs Kinesin motor domain                           539.5   3.2e-159   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00225.13.fs   1/1     495   813 ..     1   424 []   539.5 3.2e-159
PF00225.13.ls   1/1     495   813 ..     1   424 []   541.2   1e-159

Alignments of top-scoring domains:
PF00225.13.fs: domain 1 of 1, from 495 to 813: score 539.5, E = 3.2e-159
                   *->RvRPlnerEksrgssdvvnv..sedvessvitn.gkektFtFDkVFd
                      RvRP ++++ + ++ ++ ++ +  d+ +++   +gk+ +F++DkVF+
     fk06592   495    RVRPVTKEDGEGPEATNAVTfdADDDSIIHLLHkGKPVSFELDKVFS 541  

                   peatQelsepYAsqefvyestakplvesvleGyNvtIFAYGQTGSGKTYT
                   p+a+         q++v+ ++   lv s+++G+Nv+IFAYGQTG+GKTYT
     fk06592   542 PQAS---------QQDVFQEV-QALVTSCIDGFNVCIFAYGQTGAGKTYT 581  

                   MeGstdsdksspnpsdsCttpeeepGiiPRaledlFerieerkerkpvfK
                   MeG                 + e+pGi++Ral+ lF++++e   +     
     fk06592   582 MEG-----------------TAENPGINQRALQLLFSEVQEKASD----- 609  

                   PklnekgwellncqetligvsfdtrglsSdlyvedlefsvkvSylEIYNE
                                                      +e++++vS  EIYNE
     fk06592   610 -----------------------------------WEYTITVSAAEIYNE 624  

                   kirDLLspsppqrgspskdnekkkkk.pLrireDpkrGgkmdgvyVkGLt
                    +rDLL ++             ++ k ++r++ D++++      yV+GLt
     fk06592   625 VLRDLLGKE-------------PQEKlEIRLCPDGSGQ-----LYVPGLT 656  

                   eveVtsaeevlelLelGnknRtvasTkmNeeSSRSHaiFtitveqrntdt
                   e++V+s++++ +++e+G+ nRt+  T++Ne+SSRSHa +++tv++ + ++
     fk06592   657 EFQVQSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVD-CS 705  

                   tgsvvtgkdnsgeesvrvskLnLVDLAGSERaskTgatgAggrRLkEaan
                   tg ++tg            kLnLVDLAGSER++k+g   A+g RL+Ea++
     fk06592   706 TGLRTTG------------KLNLVDLAGSERVGKSG---AEGSRLREAQH 740  

                   INkSLsaLGnVInALadnqkssHiPYRDSKLTrLLQDSLGGGDNsKTlMI
                   INkSLsaLG+VI+AL++   ++H+P+R+SKLT+LLQDSL+G  +sKTlM+
     fk06592   741 INKSLSALGDVIAALRSR--QGHVPFRNSKLTYLLQDSLSG--DSKTLMV 786  

                   aniSPsssrNntnyeETLsTLrFAsRAKnIk<-*
                   +++SP ++    n +ETL +L+FA+R+++++   
     fk06592   787 VQVSPVEK----NTSETLYSLKFAERVRSVE    813  

PF00225.13.ls: domain 1 of 1, from 495 to 813: score 541.2, E = 1e-159
                   *->RvRPlnerEksrgssdvvnv..sedvessvitn.gkektFtFDkVFd
                      RvRP ++++ + ++ ++ ++ +  d+ +++   +gk+ +F++DkVF+
     fk06592   495    RVRPVTKEDGEGPEATNAVTfdADDDSIIHLLHkGKPVSFELDKVFS 541  

                   peatQelsepYAsqefvyestakplvesvleGyNvtIFAYGQTGSGKTYT
                   p+a+         q++v+ ++   lv s+++G+Nv+IFAYGQTG+GKTYT
     fk06592   542 PQAS---------QQDVFQEV-QALVTSCIDGFNVCIFAYGQTGAGKTYT 581  

                   MeGstdsdksspnpsdsCttpeeepGiiPRaledlFerieerkerkpvfK
                   MeG                 + e+pGi++Ral+ lF++++e   +     
     fk06592   582 MEG-----------------TAENPGINQRALQLLFSEVQEKASD----- 609  

                   PklnekgwellncqetligvsfdtrglsSdlyvedlefsvkvSylEIYNE
                                                      +e++++vS  EIYNE
     fk06592   610 -----------------------------------WEYTITVSAAEIYNE 624  

                   kirDLLspsppqrgspskdnekkkkk.pLrireDpkrGgkmdgvyVkGLt
                    +rDLL ++             ++ k ++r++ D++++      yV+GLt
     fk06592   625 VLRDLLGKE-------------PQEKlEIRLCPDGSGQ-----LYVPGLT 656  

                   eveVtsaeevlelLelGnknRtvasTkmNeeSSRSHaiFtitveqrntdt
                   e++V+s++++ +++e+G+ nRt+  T++Ne+SSRSHa +++tv++ + ++
     fk06592   657 EFQVQSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVD-CS 705  

                   tgsvvtgkdnsgeesvrvskLnLVDLAGSERaskTgatgAggrRLkEaan
                   tg ++tg            kLnLVDLAGSER++k+g   A+g RL+Ea++
     fk06592   706 TGLRTTG------------KLNLVDLAGSERVGKSG---AEGSRLREAQH 740  

                   INkSLsaLGnVInALadnqkssHiPYRDSKLTrLLQDSLGGGDNsKTlMI
                   INkSLsaLG+VI+AL++   ++H+P+R+SKLT+LLQDSL+G  +sKTlM+
     fk06592   741 INKSLSALGDVIAALRSR--QGHVPFRNSKLTYLLQDSLSG--DSKTLMV 786  

                   aniSPsssrNntnyeETLsTLrFAsRAKnIk<-*
                   +++SP ++    n +ETL +L+FA+R+++++   
     fk06592   787 VQVSPVEK----NTSETLYSLKFAERVRSVE    813  

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