hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-04150803/chunk_1/iprscan-20080811-04150803.nocrc
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Query sequence: fk06592
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00129                                                 547.1   7.3e-160   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00129     1/1     487   820 ..     1   404 []   547.1 7.3e-160

Alignments of top-scoring domains:
SM00129: domain 1 of 1, from 487 to 820: score 547.1, E = 7.3e-160
                   *->kgnIrVavRvdrdRPlnkrEksekakeespsvvtv.....tvtvn..
                      kgnIrV+ Rv   RP +k+  + +   e+ + vt++ ++++++   +
     fk06592   487    KGNIRVIARV---RPVTKEDGEGP---EATNAVTFdadddSIIHLlh 527  

                   ......FtFDkVFWrydvddpsasQedVFeevaaPLvdsaldGYNvaTIF
                   ++++ +F++DkVF       p+asQ+dVF+ev   Lv+s++dG+Nv +IF
     fk06592   528 kgkpvsFELDKVF------SPQASQQDVFQEVQ-ALVTSCIDGFNV-CIF 569  

                   AYGQTGSGKTyTMsGtptdpgilsndladitpdepGiIPRaledlFekid
                   AYGQTG+GKTyTM+Gt                ++pGi+ Ral+ lF +++
     fk06592   570 AYGQTGAGKTYTMEGTA---------------ENPGINQRALQLLFSEVQ 604  

                   e......fsVkvSylEIYNEkirDLLspspenSksrGkhakqsskkkLri
                   e+ ++ +++++vS  EIYNE +rDLL+++p              k + r+
     fk06592   605 EkasdweYTITVSAAEIYNEVLRDLLGKEPQE------------KLEIRL 642  

                   rEdkngnrhdapkLtrlrgqggvyVvGLtevsVsSaeevlellerGnknR
                   + d++               g+ yV+GLte+ V S+ ++ +++e G+ nR
     fk06592   643 CPDGS---------------GQLYVPGLTEFQVQSVDDINKVFEFGHTNR 677  

                   tvaaTkmNeeSSRSHaiFtitleqkeklepiadektesstnegteqikss
                   t+  T++Ne+SSRSHa +++t+++                + +t+ ++++
     fk06592   678 TTEFTNLNEHSSRSHALLIVTVRGV---------------DCSTGLRTTG 712  

                   kLnLVDLAGSERaskTgseaeGdRLkEaqnINkSLlaLGnVInALaddsh
                   kLnLVDLAGSER++k+g  aeG+RL+Eaq+INkSL+aLG+VI+AL+    
     fk06592   713 KLNLVDLAGSERVGKSG--AEGSRLREAQHINKSLSALGDVIAALRS--- 757  

                   dsaeseatkqaggkssHIPYRDSKLTrLLQdSLGGNsKTlMIanvSPsss
                                +++H+P+R+SKLT+LLQdSL G+sKTlM++ vSP  +
     fk06592   758 -------------RQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEK 794  

                   nyeETlsTLrFAsRaksIknkpavne<-*
                   n +ETl +L+FA+R++s++++p   +   
     fk06592   795 NTSETLYSLKFAERVRSVELGPGLRR    820  

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