hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-04275396/chunk_1/iprscan-20080811-04275396.nocrc
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Query sequence: fk07131
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00717                                                  54.3    1.5e-11   1
SM00298                                                  35.0      1e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00298    1/1     191   240 ..     1    63 []    35.0    1e-05
SM00717    1/1     632   680 ..     1    53 []    54.3  1.5e-11

Alignments of top-scoring domains:
SM00298: domain 1 of 1, from 191 to 240: score 35.0, E = 1e-05
                   *->eyeivEkIldhrwekkkgeveYLVKWkGysysedtWEpeenleemLk
                      e+e++ + +++r      +++ L +W  y++s+dtW+p++++e    
     fk07131   191    EEEEWVRPVMKR------DKQVLLHWGYYPDSYDTWIPASEIE---- 227  

                   kkncekkldeykkrek<-*
                      ++ + +   ++ +   
     fk07131   228 ---ASVEDAPTPEKPR    240  

SM00717: domain 1 of 1, from 632 to 680: score 54.3, E = 1.5e-11
                   *->kkgeWteeEdelLleavkkyGkgtdndWakIakelpgRtpkqcrerw
                        +eWte+E+ lLlea+++y     +dW+k+++++++Rt  +c++++
     fk07131   632    ATREWTEQETLLLLEALEMYK----DDWNKVSEHVGSRTQDECILHF 674  

                   rnllkp<-*
                    +l      
     fk07131   675 LRLPIE    680  

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