hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-04561872/chunk_1/iprscan-20080811-04561872.nocrc
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Query sequence: fk07313
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00397                                                  81.3    1.1e-19   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00397    1/1     226   293 ..     1    68 []    81.3  1.1e-19

Alignments of top-scoring domains:
SM00397: domain 1 of 1, from 226 to 293: score 81.3, E = 1.1e-19
                   *->llqqndameqerdeeleqlersiqelkqifldlgteveeQgeqldrI
                      l +qn+ m++er++e++q+ +si +l++if dlg++++eQg++ldrI
     fk07313   226    LVEQNTLMVEEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRI 272  

                   ednvdntdvnlkkankqLkka<-*
                   ++nv+++ ++++++ kqL+k    
     fk07313   273 DYNVEQSCIKTEDGLKQLHKD    293  

//