hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-05073933/chunk_1/iprscan-20080811-05073933.nocrc
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Query sequence: fk07692
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00449                                                 123.6    2.2e-32   1
SM00502                                                  67.5    1.7e-15   1
SM00336                                                  43.7    2.4e-08   1
SM00060                                                  38.6    8.4e-07   1
SM00184                                                  36.3    4.1e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00184    1/1      26    75 ..     1    23 []    36.3  4.1e-06
SM00336    1/1     130   180 ..     1    51 []    43.7  2.4e-08
SM00502    1/1     197   323 ..     1   132 []    67.5  1.7e-15
SM00060    1/1     360   450 ..     1    69 []    38.6  8.4e-07
SM00449    1/1     516   635 ..     1   145 []   123.6  2.2e-32

Alignments of top-scoring domains:
SM00184: domain 1 of 1, from 26 to 75: score 36.3, E = 4.1e-06
                   *->CpICle....pvvlpCgH.FCr.Ci.....................C
                      CpICle  ++p +lpC H+ C++C ++   ++  ++++ ++ +  +C
     fk07692    26    CPICLElfedPLLLPCAHsLCFnCAhrilvshcatnesvesitafqC 72   

                   PlC<-*
                   P+C   
     fk07692    73 PTC    75   

SM00336: domain 1 of 1, from 130 to 180: score 43.7, E = 2.4e-08
                   *->eraplCeeHgd..eepaeffCveedgallCrdCdeageHqanklfrg
                      ++++lC+++++++ + a+  C +++++++C++C  a +H+++k+f g
     fk07692   130    AEKVLCQFCDQdpAQDAVKTC-VTCEVSYCDECLKA-THPNKKPFTG 174  

                   Hrvvll<-*
                   Hr +     
     fk07692   175 HRLIEP    180  

SM00502: domain 1 of 1, from 197 to 323: score 67.5, E = 1.7e-15
                   *->qreaLeelleklrkkaeelekalkqldsiiqevegGqvdenaeevea
                       ++ Le++l++l k++ ele  l++l++ +q+ve      na + ea
     fk07692   197    EKQNLESNLTNLIKRNTELETLLAKLIQTCQHVE-----VNASRQEA 238  

                   eikaafdeLrnaLnerkkqLledLeevkenklkkLeqQlesltqkqekle
                   ++++++d L++++++r++ +  +++e k ++l+kL qQ+ ++ q+ e+  
     fk07692   239 KLTEECDLLIEIIQQRRQIIGTKIKEGKVMRLRKLAQQIANCKQCIERSA 288  

                   hainfaeeaLnsgdptelLlskkliierlqellkq<-*
                   ++i++ae+ L+++d +++L+  k+i+er+ ++ +    
     fk07692   289 SLISQAEHSLKENDHARFLQTAKNITERVSMATAS    323  

SM00060: domain 1 of 1, from 360 to 450: score 38.6, E = 8.4e-07
                   *->PgpPsnptelrvtdvtststsdltsvtlsWepP....ivgYr.....
                      P pP+     ++   + +      ++t++W+  ++ ++v+Y+ + + 
     fk07692   360    PNPPTIR--EELCTASYD------TITVHWTSDdefsVVSYElqyti 398  

                   ...........................ytltgLkPgaepwteYefrVrAv
                    +++ ++++  ++ +++  +++ +++ yt++gL+ g    t+Y f V+A+
     fk07692   399 ftgqanvvslcnsadswmivpnikqnhYTVHGLQSG----TKYIFMVKAI 444  

                   ngndaGeg<-*
                   n   aG+    
     fk07692   445 NQ--AGSR    450  

SM00449: domain 1 of 1, from 516 to 635: score 123.6, E = 2.2e-32
                   *->sGkhYfEVevdtggdkghwrvGvatksvhlypfkvrrkrkggvsllG
                      sG+hY+EV + ++++     +G+a+ks+            ++ +++G
     fk07692   516    SGRHYWEVVISGSTW---YAIGLAYKSA------------PKHEWIG 547  

                   edkgSwgyrgdggkkyhasefgeeyglpfqepgDviGcflDleaggStis
                   ++  Sw+++ ++ +++  +++++e++ ++ ++ +++G++lD+++g  +i 
     fk07692   548 KNSASWALCRCN-NNWVVRHNSKEIPIEPAPHLRRVGILLDYDNG--SIA 594  

                   FykNGkyLgdshilaffdvtfsgpLyPavslgstdgGgesvrlnfGp.p<
                   Fy +  + +    l++fdv f +p++P++++++    ++ + ++  p p 
     fk07692   595 FYDALNSIH----LYTFDVAFAQPVCPTFTVWN----KCLTIITGLPiP  635  

                   -*
                     
     fk07692     -    -    

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