# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofk08328.fasta.nr -Q fk08328.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fk08328, 758 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6823926 sequences Expectation_n fit: rho(ln(x))= 6.0978+/-0.000202; mu= 8.6588+/- 0.011 mean_var=126.6747+/-24.206, 0's: 44 Z-trim: 136 B-trim: 53 in 1/64 Lambda= 0.113954 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62088186|dbj|BAD92540.1| HIV TAT specific facto ( 758) 5082 847.4 0 gi|74754346|sp|O43719.1|HTSF1_HUMAN HIV Tat-specif ( 755) 5050 842.1 0 gi|30584025|gb|AAP36261.1| Homo sapiens HIV TAT sp ( 756) 5050 842.1 0 gi|75070769|sp|Q5RB63.1|HTSF1_PONAB HIV Tat-specif ( 754) 4977 830.1 0 gi|1667611|gb|AAB18823.1| Tat-SF1 [Homo sapiens] ( 754) 4971 829.1 0 gi|109132443|ref|XP_001082693.1| PREDICTED: simila ( 754) 4903 817.9 0 gi|194387946|dbj|BAG61386.1| unnamed protein produ ( 721) 4430 740.2 5.8e-211 gi|148710216|gb|EDL42162.1| HIV TAT specific facto ( 793) 3820 639.9 9.5e-181 gi|81913100|sp|Q8BGC0|HTSF1_MOUSE HIV Tat-specific ( 757) 3818 639.6 1.2e-180 gi|74009016|ref|XP_538183.2| PREDICTED: similar to ( 914) 3528 592.0 3e-166 gi|119904829|ref|XP_001249547.1| PREDICTED: simila ( 766) 3331 559.5 1.5e-156 gi|149015808|gb|EDL75132.1| HIV TAT specific facto ( 776) 3284 551.8 3.1e-154 gi|194680179|ref|XP_001790679.1| PREDICTED: HIV-1 ( 761) 3116 524.2 6.4e-146 gi|194228331|ref|XP_001915727.1| PREDICTED: simila ( 769) 3092 520.2 9.9e-145 gi|12847222|dbj|BAB27483.1| unnamed protein produc ( 561) 3061 515.0 2.7e-143 gi|86438143|gb|AAI12691.1| HTATSF1 protein [Bos ta ( 524) 2982 502.0 2.1e-139 gi|109132447|ref|XP_001082302.1| PREDICTED: simila ( 716) 2972 500.5 8.2e-139 gi|148710217|gb|EDL42163.1| HIV TAT specific facto ( 464) 2421 409.7 1.1e-111 gi|76663040|ref|XP_606362.2| PREDICTED: hypothetic ( 335) 2065 351.0 3.7e-94 gi|126342493|ref|XP_001362589.1| PREDICTED: hypoth ( 659) 1921 327.6 8e-87 gi|126297796|ref|XP_001368201.1| PREDICTED: hypoth ( 603) 1896 323.5 1.3e-85 gi|149410999|ref|XP_001514214.1| PREDICTED: hypoth ( 429) 1828 312.2 2.4e-82 gi|53131339|emb|CAG31810.1| hypothetical protein [ ( 450) 1807 308.7 2.7e-81 gi|118089467|ref|XP_001233032.1| PREDICTED: HIV TA ( 450) 1807 308.7 2.7e-81 gi|57471619|emb|CAI42404.1| HIV-1 Tat specific fac ( 244) 1646 282.0 1.6e-73 gi|59862144|gb|AAH90381.1| Htatsf1-prov protein [X ( 524) 1570 269.8 1.6e-69 gi|37590291|gb|AAH59346.1| LOC398736 protein [Xeno ( 477) 1541 265.0 4.1e-68 gi|54038341|gb|AAH84628.1| LOC398736 protein [Xeno ( 452) 1540 264.8 4.4e-68 gi|169642352|gb|AAI60527.1| Htatsf1 protein [Xenop ( 389) 1514 260.5 7.7e-67 gi|57471618|emb|CAI42403.1| HIV-1 Tat specific fac ( 223) 1506 258.9 1.3e-66 gi|33417205|gb|AAH55565.1| HIV TAT specific factor ( 450) 1439 248.2 4.4e-63 gi|47221801|emb|CAG08855.1| unnamed protein produc ( 383) 1436 247.7 5.5e-63 gi|2982698|dbj|BAA25269.1| tFZR1 [Oncorhynchus myk ( 447) 1161 202.5 2.5e-49 gi|12838145|dbj|BAB24100.1| unnamed protein produc ( 195) 1115 194.6 2.7e-47 gi|115618688|ref|XP_793195.2| PREDICTED: hypotheti ( 462) 1104 193.2 1.7e-46 gi|189242416|ref|XP_001811064.1| PREDICTED: simila (1142) 1084 190.3 3.1e-45 gi|190584464|gb|EDV24533.1| hypothetical protein T ( 378) 1056 185.2 3.5e-44 gi|70569833|dbj|BAE06485.1| Ci-HTATSF1 [Ciona inte ( 494) 1034 181.7 5.2e-43 gi|156552643|ref|XP_001603250.1| PREDICTED: simila ( 583) 1020 179.5 2.9e-42 gi|110761899|ref|XP_391935.3| PREDICTED: similar t ( 353) 1001 176.1 1.8e-41 gi|7296432|gb|AAF51719.1| CG6049-PB, isoform B [Dr ( 556) 948 167.6 1e-38 gi|194181430|gb|EDW95041.1| GE22336 [Drosophila ya ( 554) 941 166.5 2.2e-38 gi|190624444|gb|EDV39968.1| GF24193 [Drosophila an ( 555) 939 166.1 2.8e-38 gi|157016137|gb|EAA10753.4| AGAP006266-PA [Anophel ( 665) 938 166.0 3.6e-38 gi|190655403|gb|EDV52646.1| GG13238 [Drosophila er ( 554) 934 165.3 5e-38 gi|194154339|gb|EDW69523.1| GJ12075 [Drosophila vi ( 541) 919 162.8 2.7e-37 gi|193898587|gb|EDV97453.1| GH14692 [Drosophila gr ( 569) 911 161.5 7e-37 gi|193919692|gb|EDW18559.1| GI13305 [Drosophila mo ( 265) 830 147.9 4.2e-33 gi|13559752|gb|AAK29956.1| Hypothetical protein Y6 ( 442) 817 146.0 2.6e-32 gi|90086157|dbj|BAE91631.1| unnamed protein produc ( 120) 771 137.8 2e-30 >>gi|62088186|dbj|BAD92540.1| HIV TAT specific factor 1 (758 aa) initn: 5082 init1: 5082 opt: 5082 Z-score: 4521.7 bits: 847.4 E(): 0 Smith-Waterman score: 5082; 100.000% identity (100.000% similar) in 758 aa overlap (1-758:1-758) 10 20 30 40 50 60 fk0832 VGNMSGTNLDGNDEFDEQLRMQELYGDGKDGDTQTDAGGEPDSLGQQPTDTPYEWDLDKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VGNMSGTNLDGNDEFDEQLRMQELYGDGKDGDTQTDAGGEPDSLGQQPTDTPYEWDLDKK 10 20 30 40 50 60 70 80 90 100 110 120 fk0832 AWFPKITEDFIATYQANYGFSNDGASSSTANVEDVHARTAEEPPQEKAPEPTDARKKGEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AWFPKITEDFIATYQANYGFSNDGASSSTANVEDVHARTAEEPPQEKAPEPTDARKKGEK 70 80 90 100 110 120 130 140 150 160 170 180 fk0832 RKAESGWVHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RKAESGWVHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ 130 140 150 160 170 180 190 200 210 220 230 240 fk0832 GNLKGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GNLKGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYK 190 200 210 220 230 240 250 260 270 280 290 300 fk0832 KKLSMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 KKLSMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSK 250 260 270 280 290 300 310 320 330 340 350 360 fk0832 FGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 FGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEE 310 320 330 340 350 360 370 380 390 400 410 420 fk0832 TSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFSEHPSTSKMNAQETA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFSEHPSTSKMNAQETA 370 380 390 400 410 420 430 440 450 460 470 480 fk0832 TGMAFEEPIDEKKFEKTEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPKRGFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TGMAFEEPIDEKKFEKTEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPKRGFE 430 440 450 460 470 480 490 500 510 520 530 540 fk0832 ASCSQKESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ASCSQKESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTK 490 500 510 520 530 540 550 560 570 580 590 600 fk0832 ESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENILDKELEENDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENILDKELEENDS 550 560 570 580 590 600 610 620 630 640 650 660 fk0832 ENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLE 610 620 630 640 650 660 670 680 690 700 710 720 fk0832 AADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEEEDSSEKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEEEDSSEKL 670 680 690 700 710 720 730 740 750 fk0832 FDDSDERGTLGGFGSVEEGPLSTGSSFILSSDDDDDDI :::::::::::::::::::::::::::::::::::::: gi|620 FDDSDERGTLGGFGSVEEGPLSTGSSFILSSDDDDDDI 730 740 750 >>gi|74754346|sp|O43719.1|HTSF1_HUMAN HIV Tat-specific f (755 aa) initn: 5050 init1: 5050 opt: 5050 Z-score: 4493.3 bits: 842.1 E(): 0 Smith-Waterman score: 5050; 99.603% identity (99.868% similar) in 755 aa overlap (4-758:1-755) 10 20 30 40 50 60 fk0832 VGNMSGTNLDGNDEFDEQLRMQELYGDGKDGDTQTDAGGEPDSLGQQPTDTPYEWDLDKK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 MSGTNLDGNDEFDEQLRMQELYGDGKDGDTQTDAGGEPDSLGQQPTDTPYEWDLDKK 10 20 30 40 50 70 80 90 100 110 120 fk0832 AWFPKITEDFIATYQANYGFSNDGASSSTANVEDVHARTAEEPPQEKAPEPTDARKKGEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 AWFPKITEDFIATYQANYGFSNDGASSSTANVEDVHARTAEEPPQEKAPEPTDARKKGEK 60 70 80 90 100 110 130 140 150 160 170 180 fk0832 RKAESGWVHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 RKAESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ 120 130 140 150 160 170 190 200 210 220 230 240 fk0832 GNLKGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 GNLKGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYK 180 190 200 210 220 230 250 260 270 280 290 300 fk0832 KKLSMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 KKLSMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSK 240 250 260 270 280 290 310 320 330 340 350 360 fk0832 FGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 FGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEE 300 310 320 330 340 350 370 380 390 400 410 420 fk0832 TSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFSEHPSTSKMNAQETA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 TSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFSEHPSTSKMNAQETA 360 370 380 390 400 410 430 440 450 460 470 480 fk0832 TGMAFEEPIDEKKFEKTEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPKRGFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 TGMAFEEPIDEKKFEKTEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPKRGFE 420 430 440 450 460 470 490 500 510 520 530 540 fk0832 ASCSQKESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTK .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 GSCSQKESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTK 480 490 500 510 520 530 550 560 570 580 590 600 fk0832 ESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENILDKELEENDS :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|747 ESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENVLDKELEENDS 540 550 560 570 580 590 610 620 630 640 650 660 fk0832 ENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 ENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLE 600 610 620 630 640 650 670 680 690 700 710 720 fk0832 AADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEEEDSSEKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 AADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEEEDSSEKL 660 670 680 690 700 710 730 740 750 fk0832 FDDSDERGTLGGFGSVEEGPLSTGSSFILSSDDDDDDI :::::::::::::::::::::::::::::::::::::: gi|747 FDDSDERGTLGGFGSVEEGPLSTGSSFILSSDDDDDDI 720 730 740 750 >>gi|30584025|gb|AAP36261.1| Homo sapiens HIV TAT specif (756 aa) initn: 5050 init1: 5050 opt: 5050 Z-score: 4493.3 bits: 842.1 E(): 0 Smith-Waterman score: 5050; 99.603% identity (99.868% similar) in 755 aa overlap (4-758:1-755) 10 20 30 40 50 60 fk0832 VGNMSGTNLDGNDEFDEQLRMQELYGDGKDGDTQTDAGGEPDSLGQQPTDTPYEWDLDKK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 MSGTNLDGNDEFDEQLRMQELYGDGKDGDTQTDAGGEPDSLGQQPTDTPYEWDLDKK 10 20 30 40 50 70 80 90 100 110 120 fk0832 AWFPKITEDFIATYQANYGFSNDGASSSTANVEDVHARTAEEPPQEKAPEPTDARKKGEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 AWFPKITEDFIATYQANYGFSNDGASSSTANVEDVHARTAEEPPQEKAPEPTDARKKGEK 60 70 80 90 100 110 130 140 150 160 170 180 fk0832 RKAESGWVHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 RKAESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ 120 130 140 150 160 170 190 200 210 220 230 240 fk0832 GNLKGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 GNLKGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYK 180 190 200 210 220 230 250 260 270 280 290 300 fk0832 KKLSMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 KKLSMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSK 240 250 260 270 280 290 310 320 330 340 350 360 fk0832 FGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 FGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEE 300 310 320 330 340 350 370 380 390 400 410 420 fk0832 TSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFSEHPSTSKMNAQETA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 TSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFSEHPSTSKMNAQETA 360 370 380 390 400 410 430 440 450 460 470 480 fk0832 TGMAFEEPIDEKKFEKTEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPKRGFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 TGMAFEEPIDEKKFEKTEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPKRGFE 420 430 440 450 460 470 490 500 510 520 530 540 fk0832 ASCSQKESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTK .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 GSCSQKESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTK 480 490 500 510 520 530 550 560 570 580 590 600 fk0832 ESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENILDKELEENDS :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|305 ESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENVLDKELEENDS 540 550 560 570 580 590 610 620 630 640 650 660 fk0832 ENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 ENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLE 600 610 620 630 640 650 670 680 690 700 710 720 fk0832 AADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEEEDSSEKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 AADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEEEDSSEKL 660 670 680 690 700 710 730 740 750 fk0832 FDDSDERGTLGGFGSVEEGPLSTGSSFILSSDDDDDDI :::::::::::::::::::::::::::::::::::::: gi|305 FDDSDERGTLGGFGSVEEGPLSTGSSFILSSDDDDDDIL 720 730 740 750 >>gi|75070769|sp|Q5RB63.1|HTSF1_PONAB HIV Tat-specific f (754 aa) initn: 4977 init1: 4977 opt: 4977 Z-score: 4428.5 bits: 830.1 E(): 0 Smith-Waterman score: 4977; 98.274% identity (99.203% similar) in 753 aa overlap (4-756:1-753) 10 20 30 40 50 60 fk0832 VGNMSGTNLDGNDEFDEQLRMQELYGDGKDGDTQTDAGGEPDSLGQQPTDTPYEWDLDKK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 MSGTNLDGNDEFDEQLRMQELYGDGKDGDTQTDAGGEPDSLGQQPTDTPYEWDLDKK 10 20 30 40 50 70 80 90 100 110 120 fk0832 AWFPKITEDFIATYQANYGFSNDGASSSTANVEDVHARTAEEPPQEKAPEPTDARKKGEK ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: gi|750 AWFPKITEDFIATYQANYGFSNDGASSSTANVEDVHARTAEEPPQEKAPEPTDPRKKGEK 60 70 80 90 100 110 130 140 150 160 170 180 fk0832 RKAESGWVHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 RKAESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ 120 130 140 150 160 170 190 200 210 220 230 240 fk0832 GNLKGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 GNLKGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYK 180 190 200 210 220 230 250 260 270 280 290 300 fk0832 KKLSMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 KKLSMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSK 240 250 260 270 280 290 310 320 330 340 350 360 fk0832 FGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 FGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEE 300 310 320 330 340 350 370 380 390 400 410 420 fk0832 TSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFSEHPSTSKMNAQETA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 TSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFSEHPSTSKMNAQETA 360 370 380 390 400 410 430 440 450 460 470 480 fk0832 TGMAFEEPIDEKKFEKTEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPKRGFE :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: gi|750 TGMAFEEPIDEKKFEKTEDGGEFEEGASENNAKESSPEKEAEEGCPGKESEEGCPKRGFE 420 430 440 450 460 470 490 500 510 520 530 540 fk0832 ASCSQKESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTK .::::::::::::.::::: :::::::::::.:::::::.::::::: :::::::::::: gi|750 GSCSQKESEEGNPLRGSEEGSPKKESKKKTLRNDCEENGFAKESEDDPNKESEEEVGPTK 480 490 500 510 520 530 550 560 570 580 590 600 fk0832 ESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENILDKELEENDS :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|750 ESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENVLDKELEENDS 540 550 560 570 580 590 610 620 630 640 650 660 fk0832 ENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLE :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|750 ENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESNEKEDEEYADEKGLE 600 610 620 630 640 650 670 680 690 700 710 720 fk0832 AADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEEEDSSEKL ::::: ::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|750 AADKKEEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEEEDSNEKL 660 670 680 690 700 710 730 740 750 fk0832 FDDSDERGTLGGFGSVEEGPLSTGSSFILSSDDDDDDI :::::::::::::::::::::::::::::::::::: gi|750 FDDSDERGTLGGFGSVEEGPLSTGSSFILSSDDDDDI 720 730 740 750 >>gi|1667611|gb|AAB18823.1| Tat-SF1 [Homo sapiens] (754 aa) initn: 2640 init1: 2640 opt: 4971 Z-score: 4423.1 bits: 829.1 E(): 0 Smith-Waterman score: 4971; 98.278% identity (99.073% similar) in 755 aa overlap (4-758:1-754) 10 20 30 40 50 60 fk0832 VGNMSGTNLDGNDEFDEQLRMQELYGDGKDGDTQTDAGGEPDSLGQQPTDTPYEWDLDKK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 MSGTNLDGNDEFDEQLRMQELYGDGKDGDTQTDAGGEPDSLGQQPTDTPYEWDLDKK 10 20 30 40 50 70 80 90 100 110 120 fk0832 AWFPKITEDFIATYQANYGFSNDGASSSTANVEDVHARTAEEPPQEKAPEPTDARKKGEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 AWFPKITEDFIATYQANYGFSNDGASSSTANVEDVHARTAEEPPQEKAPEPTDARKKGEK 60 70 80 90 100 110 130 140 150 160 170 180 fk0832 RKAESGWVHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 RKAESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ 120 130 140 150 160 170 190 200 210 220 230 240 fk0832 GNLKGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 GNLKGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYK 180 190 200 210 220 230 250 260 270 280 290 300 fk0832 KKLSMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 KKLSMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSK 240 250 260 270 280 290 310 320 330 340 350 360 fk0832 FGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 FGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEE 300 310 320 330 340 350 370 380 390 400 410 420 fk0832 TSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFSEHPSTSKMNAQETA ::::::::::::::::::::::::: . .: ..:::::::::::::::::::::::: gi|166 TSREREERLRGWEAFLNAPEANRGLS-VQILSLLRKAGPSRARHFSEHPSTSKMNAQETA 360 370 380 390 400 410 430 440 450 460 470 480 fk0832 TGMAFEEPIDEKKFEKTEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPKRGFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 TGMAFEEPIDEKKFEKTEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPKRGFE 420 430 440 450 460 470 490 500 510 520 530 540 fk0832 ASCSQKESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTK .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 GSCSQKESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTK 480 490 500 510 520 530 550 560 570 580 590 600 fk0832 ESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENILDKELEENDS :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|166 ESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENVLDKELEENDS 540 550 560 570 580 590 610 620 630 640 650 660 fk0832 ENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 ENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLE 600 610 620 630 640 650 670 680 690 700 710 720 fk0832 AADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEEEDSSEKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 AADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEEEDSSEKL 660 670 680 690 700 710 730 740 750 fk0832 FDDSDERGTLGGFGSVEEGPLSTGSSFILSSDDDDDDI :::::::::::::::::::::::::::::::::::::: gi|166 FDDSDERGTLGGFGSVEEGPLSTGSSFILSSDDDDDDI 720 730 740 750 >>gi|109132443|ref|XP_001082693.1| PREDICTED: similar to (754 aa) initn: 4903 init1: 4903 opt: 4903 Z-score: 4362.7 bits: 817.9 E(): 0 Smith-Waterman score: 4903; 97.078% identity (98.406% similar) in 753 aa overlap (4-756:1-753) 10 20 30 40 50 60 fk0832 VGNMSGTNLDGNDEFDEQLRMQELYGDGKDGDTQTDAGGEPDSLGQQPTDTPYEWDLDKK :::.::::::::::::::::::::::::::::::::: ::::::::::::::::::: gi|109 MSGSNLDGNDEFDEQLRMQELYGDGKDGDTQTDAGGETDSLGQQPTDTPYEWDLDKK 10 20 30 40 50 70 80 90 100 110 120 fk0832 AWFPKITEDFIATYQANYGFSNDGASSSTANVEDVHARTAEEPPQEKAPEPTDARKKGEK :::::::::::::::::::::::::::::::::::::::::::::::: :::: :::::: gi|109 AWFPKITEDFIATYQANYGFSNDGASSSTANVEDVHARTAEEPPQEKASEPTDPRKKGEK 60 70 80 90 100 110 130 140 150 160 170 180 fk0832 RKAESGWVHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RKAESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ 120 130 140 150 160 170 190 200 210 220 230 240 fk0832 GNLKGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GNLKGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYK 180 190 200 210 220 230 250 260 270 280 290 300 fk0832 KKLSMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KKLSMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSK 240 250 260 270 280 290 310 320 330 340 350 360 fk0832 FGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEE 300 310 320 330 340 350 370 380 390 400 410 420 fk0832 TSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFSEHPSTSKMNAQETA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFSEHPSTSKMNAQETA 360 370 380 390 400 410 430 440 450 460 470 480 fk0832 TGMAFEEPIDEKKFEKTEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPKRGFE ::::::::::::::::::::::::::: :::::::::::::::: : ::::::::::::: gi|109 TGMAFEEPIDEKKFEKTEDGGEFEEGAFENNAKESSPEKEAEEGVPAKESEEGCPKRGFE 420 430 440 450 460 470 490 500 510 520 530 540 fk0832 ASCSQKESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTK ..: ::::::::::::::: :::::::::.::::::::::::::::: :::::::.:::: gi|109 GGCPQKESEEGNPVRGSEEGSPKKESKKKALKNDCEENGLAKESEDDPNKESEEEAGPTK 480 490 500 510 520 530 550 560 570 580 590 600 fk0832 ESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENILDKELEENDS :::::::::::::::::::::::::::::::::::::::::::::::::.::.::::::: gi|109 ESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENVLDNELEENDS 540 550 560 570 580 590 610 620 630 640 650 660 fk0832 ENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLE :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|109 ENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEDDTYEKVFDDESDEKEDEEYADEKGLE 600 610 620 630 640 650 670 680 690 700 710 720 fk0832 AADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEEEDSSEKL :: :: ::::::::::::::.:::::::::::::::::::::::::::::::::::.::: gi|109 AAGKKEEEGDADEKLFEESDEKEDEDADGKEVEDADEKLFEDDDSNEKLFDEEEDSNEKL 660 670 680 690 700 710 730 740 750 fk0832 FDDSDERGTLGGFGSVEEGPLSTGSSFILSSDDDDDDI :::::::::::::::::::::::::::::::::::: gi|109 FDDSDERGTLGGFGSVEEGPLSTGSSFILSSDDDDDI 720 730 740 750 >>gi|194387946|dbj|BAG61386.1| unnamed protein product [ (721 aa) initn: 4404 init1: 4404 opt: 4430 Z-score: 3942.7 bits: 740.2 E(): 5.8e-211 Smith-Waterman score: 4743; 94.834% identity (95.364% similar) in 755 aa overlap (4-758:1-721) 10 20 30 40 50 60 fk0832 VGNMSGTNLDGNDEFDEQLRMQELYGDGKDGDTQTDAGGEPDSLGQQPTDTPYEWDLDKK ::.::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|194 MSATNLDGNDEFDEQLRMQELYGDGKDGDTQSDAGGEPDSLGQQPTDTPYEWDLDKK 10 20 30 40 50 70 80 90 100 110 120 fk0832 AWFPKITEDFIATYQANYGFSNDGASSSTANVEDVHARTAEEPPQEKAPEPTDARKKGEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 AWFPKITEDFIATYQANYGFSNDGASSSTANVEDVHARTAEEPPQEKAPEPTDARKKGEK 60 70 80 90 100 110 130 140 150 160 170 180 fk0832 RKAESGWVHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RKAESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ 120 130 140 150 160 170 190 200 210 220 230 240 fk0832 GNLKGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GNLKGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYK 180 190 200 210 220 230 250 260 270 280 290 300 fk0832 KKLSMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KKLSMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSK 240 250 260 270 280 290 310 320 330 340 350 360 fk0832 FGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEE 300 310 320 330 340 350 370 380 390 400 410 420 fk0832 TSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFSEHPSTSKMNAQETA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFSEHPSTSKMNAQETA 360 370 380 390 400 410 430 440 450 460 470 480 fk0832 TGMAFEEPIDEKKFEKTEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPKRGFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TGMAFEEPIDEKKFEKTEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPKRGFE 420 430 440 450 460 470 490 500 510 520 530 540 fk0832 ASCSQKESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTK .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GSCSQKESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTK 480 490 500 510 520 530 550 560 570 580 590 600 fk0832 ESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENILDKELEENDS :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|194 ESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENVLDKELEENDS 540 550 560 570 580 590 610 620 630 640 650 660 fk0832 ENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLE ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDE--------- 600 610 620 630 640 670 680 690 700 710 720 fk0832 AADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEEEDSSEKL ::::::::::::::::::::::::::::::::::: gi|194 -------------------------DADGKEVEDADEKLFEDDDSNEKLFDEEEDSSEKL 650 660 670 680 730 740 750 fk0832 FDDSDERGTLGGFGSVEEGPLSTGSSFILSSDDDDDDI :::::::::::::::::::::::::::::::::::::: gi|194 FDDSDERGTLGGFGSVEEGPLSTGSSFILSSDDDDDDI 690 700 710 720 >>gi|148710216|gb|EDL42162.1| HIV TAT specific factor 1, (793 aa) initn: 2685 init1: 2685 opt: 3820 Z-score: 3400.2 bits: 639.9 E(): 9.5e-181 Smith-Waterman score: 3820; 75.357% identity (89.754% similar) in 771 aa overlap (1-757:34-791) 10 20 fk0832 VGNMSGTNLDGNDEFDEQLRMQELYG-DGK : .:::.::.:::::::::::::::: : : gi|148 QSKLCRPLFLCSCPAPSRPLHFSDRGVRDYVRTMSGNNLSGNDEFDEQLRMQELYGGDPK 10 20 30 40 50 60 30 40 50 60 70 80 fk0832 DGDTQTDAGGEPDSLGQQPTDTPYEWDLDKKAWFPKITEDFIATYQANYGFSNDGASSST .::::.. .:: :::: : ::::::::::::::::::::::::::::::::.::::::: gi|148 EGDTQNEPSGEAHSLGQPPDDTPYEWDLDKKAWFPKITEDFIATYQANYGFSSDGASSST 70 80 90 100 110 120 90 100 110 120 130 140 fk0832 ANVEDVHARTAEEPPQEKAPEPTDARKKGEKRKAESGWVHVEEDRNTNVYVSGLPPDITV :::.:......:::::...:: :...::::::::::: ::::::::::::::::::::: gi|148 ANVQDANTKAVEEPPQKEVPETPDSKRKGEKRKAESGWFHVEEDRNTNVYVSGLPPDITV 130 140 150 160 170 180 150 160 170 180 190 200 fk0832 DEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQGNLKGDGLCCYLKRESVELALKLLDEDEI :::::::::::::::::::::::::::::.::::::::::::::.::::::::::::::: gi|148 DEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQGNLKGDGLCCYLKKESVELALKLLDEDEI 190 200 210 220 230 240 210 220 230 240 250 260 fk0832 RGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKLSMQQKQLDWRPERRAGPSRMRHERVV :::::::::::::::::::::::::::::::::::.:::::::::::::::.:.:::::: gi|148 RGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKLSLQQKQLDWRPERRAGPNRLRHERVV 250 260 270 280 290 300 270 280 290 300 310 320 fk0832 IIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEAD :.::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|148 ILKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFREPEEAD 310 320 330 340 350 360 330 340 350 360 370 380 fk0832 YCIQTLDGRWFGGRQITAQAWDGTTDYQVEETSREREERLRGWEAFLNAPEANRGLRRSD .:::::::::::::::::::::::::::::::::::::::::::::::::::.::::: : gi|148 HCIQTLDGRWFGGRQITAQAWDGTTDYQVEETSREREERLRGWEAFLNAPEASRGLRRMD 370 380 390 400 410 420 390 400 410 420 430 440 fk0832 SVSASERAGPSRARHFSEHPSTSKMNAQETATGMAFEEPIDEKKFEKTEDGGEFEEGASE :...::: :::: :::::::: :.:.:::..::::::: :::.::::.:.::: : ::: gi|148 SIAGSERPGPSRMRHFSEHPSMSNMKAQEATTGMAFEETIDENKFEKAEEGGESEGDASE 430 440 450 460 470 480 450 460 470 480 490 500 fk0832 NNAKESS-----PEKEAEEGCPEKESEEGCPKRGFEASCSQKESEEGNPVRGSEEDSPKK ..:::.. ::.:. ::: .::.:::::.:..: ::::: ..:..:.. gi|148 KDAKEGGSDGDHPEREGGEGCSKKENEEGCPERALEP-------EEGNPQTEAQENGPER 490 500 510 520 530 510 520 530 540 550 560 fk0832 ESKKKTLKNDCEENGLAKESED-DLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSEDG :..::. : : :.::..::::: ::.:::: : . ::::.::::.::.:: :::::.:: gi|148 EARKKS-KMDYEKNGFSKESEDNDLGKESEGEDSLKKESEDDDSEEESEEDSSEKQSQDG 540 550 560 570 580 590 570 580 590 600 610 620 fk0832 SEREFEENGLEKDLDEEGSEKELHENILDKELEENDSENSEFEDDGSEKVLDEEGSEREF :..:.::::..::.:.. :.::. :.. .:: :::....::: :.:::.::::::::::: gi|148 SDKEIEENGVKKDVDQDVSDKEFPEDV-EKESEENETDKSEF-DEGSERVLDEEGSEREF 600 610 620 630 640 650 630 640 650 660 670 fk0832 DEDSDEKEEEED------TYEKVFDDESDEKEDEEYADEKGLEAADKKAEEGDADEKLFE .::::::::: : .::.::::.::. :.:: :::: : :: : :..: :::::. gi|148 EEDSDEKEEEGDDDEEEVVYERVFDDDSDDIEEEEEADEKECEDADDKEEDNDIDEKLFD 660 670 680 690 700 710 680 690 700 710 720 730 fk0832 ESDDKEDE-DADGKEVEDADEKLFEDDDSNEKLFDEEEDSSEKLFDDSDERGTLGGFGSV .::.:::: :.:::. .::..:.:::. :::::::::: .::::::::::::.:. gi|148 DSDEKEDEEDTDGKKDDDASDKVFEDN-SNEKLFDEEEGPNEKLFDDSDERGTVGNVK-- 720 730 740 750 760 770 740 750 fk0832 EEGPLSTGSSFILSSDDDDDDI :.: :: ::: :::.::::: gi|148 EDGSQSTDSSFALSSSDDDDDEV 780 790 >>gi|81913100|sp|Q8BGC0|HTSF1_MOUSE HIV Tat-specific fac (757 aa) initn: 2685 init1: 2685 opt: 3818 Z-score: 3398.7 bits: 639.6 E(): 1.2e-180 Smith-Waterman score: 3818; 75.521% identity (89.844% similar) in 768 aa overlap (4-757:1-755) 10 20 30 40 50 fk0832 VGNMSGTNLDGNDEFDEQLRMQELYG-DGKDGDTQTDAGGEPDSLGQQPTDTPYEWDLDK :::.::.:::::::::::::::: : :.::::.. .:: :::: : :::::::::: gi|819 MSGNNLSGNDEFDEQLRMQELYGGDPKEGDTQNEPSGEAHSLGQPPDDTPYEWDLDK 10 20 30 40 50 60 70 80 90 100 110 fk0832 KAWFPKITEDFIATYQANYGFSNDGASSSTANVEDVHARTAEEPPQEKAPEPTDARKKGE ::::::::::::::::::::::.::::::::::.:......:::::...:: :...::: gi|819 KAWFPKITEDFIATYQANYGFSSDGASSSTANVQDANTKAVEEPPQKEVPETPDSKRKGE 60 70 80 90 100 110 120 130 140 150 160 170 fk0832 KRKAESGWVHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDN :::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::. gi|819 KRKAESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDD 120 130 140 150 160 170 180 190 200 210 220 230 fk0832 QGNLKGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDY ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|819 QGNLKGDGLCCYLKKESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDY 180 190 200 210 220 230 240 250 260 270 280 290 fk0832 KKKLSMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECS :::::.:::::::::::::::.:.:::::::.:::::::::::::::::::::::::::: gi|819 KKKLSLQQKQLDWRPERRAGPNRLRHERVVILKNMFHPMDFEDDPLVLNEIREDLRVECS 240 250 260 270 280 290 300 310 320 330 340 350 fk0832 KFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVE ::::::::::::::::::::::::.:::::.::::::::::::::::::::::::::::: gi|819 KFGQIRKLLLFDRHPDGVASVSFREPEEADHCIQTLDGRWFGGRQITAQAWDGTTDYQVE 300 310 320 330 340 350 360 370 380 390 400 410 fk0832 ETSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFSEHPSTSKMNAQET ::::::::::::::::::::::.::::: ::...::: :::: :::::::: :.:.:::. gi|819 ETSREREERLRGWEAFLNAPEASRGLRRMDSIAGSERPGPSRMRHFSEHPSMSNMKAQEA 360 370 380 390 400 410 420 430 440 450 460 470 fk0832 ATGMAFEEPIDEKKFEKTEDGGEFEEGASENNAKESS-----PEKEAEEGCPEKESEEGC .::::::: :::.::::.:.::: : :::..:::.. ::.:. ::: .::.:::: gi|819 TTGMAFEETIDENKFEKAEEGGESEGDASEKDAKEGGSDGDHPEREGGEGCSKKENEEGC 420 430 440 450 460 470 480 490 500 510 520 530 fk0832 PKRGFEASCSQKESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGLAKESED-DLNKESE :.:..: ::::: ..:..:..:..::. : : :.::..::::: ::.:::: gi|819 PERALEP-------EEGNPQTEAQENGPEREARKKS-KMDYEKNGFSKESEDNDLGKESE 480 490 500 510 520 540 550 560 570 580 590 fk0832 EEVGPTKESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENILDK : . ::::.::::.::.:: :::::.:::..:.::::..::.:.. :.::. :.. .: gi|819 GEDSLKKESEDDDSEEESEEDSSEKQSQDGSDKEIEENGVKKDVDQDVSDKEFPEDV-EK 530 540 550 560 570 580 600 610 620 630 640 fk0832 ELEENDSENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEED------TYEKVFDDESDE : :::....::: :.:::.:::::::::::.::::::::: : .::.::::.::. gi|819 ESEENETDKSEF-DEGSERVLDEEGSEREFEEDSDEKEEEGDDDEEEVVYERVFDDDSDD 590 600 610 620 630 640 650 660 670 680 690 700 fk0832 KEDEEYADEKGLEAADKKAEEGDADEKLFEESDDKEDE-DADGKEVEDADEKLFEDDDSN :.:: :::: : :: : :..: :::::..::.:::: :.:::. .::..:.:::. :: gi|819 IEEEEEADEKECEDADDKEEDNDIDEKLFDDSDEKEDEEDTDGKKDDDASDKVFEDN-SN 650 660 670 680 690 700 710 720 730 740 750 fk0832 EKLFDEEEDSSEKLFDDSDERGTLGGFGSVEEGPLSTGSSFILSSDDDDDDI :::::::: .::::::::::::.:. :.: :: ::: :::.::::: gi|819 EKLFDEEEGPNEKLFDDSDERGTVGNVK--EDGSQSTDSSFALSSSDDDDDEV 710 720 730 740 750 >>gi|74009016|ref|XP_538183.2| PREDICTED: similar to HIV (914 aa) initn: 4892 init1: 3385 opt: 3528 Z-score: 3140.0 bits: 592.0 E(): 3e-166 Smith-Waterman score: 4148; 81.050% identity (91.037% similar) in 781 aa overlap (1-758:144-914) 10 20 30 fk0832 VGNMSGTNLDGNDEFDEQLRMQELYGDGKD ::::::.::::::::::::::::::::.:: gi|740 VEPRRRGPVERARWAAARQGLQPAARARARVGNMSGNNLDGNDEFDEQLRMQELYGDAKD 120 130 140 150 160 170 40 50 60 70 80 90 fk0832 GDTQTDAGGEPDSLGQQPTDTPYEWDLDKKAWFPKITEDFIATYQANYGFSNDGASSSTA :::: : .:::::.::::.:::::::::::::::::::::::::::::::::.::::::: gi|740 GDTQKDPSGEPDSFGQQPADTPYEWDLDKKAWFPKITEDFIATYQANYGFSNEGASSSTA 180 190 200 210 220 230 100 110 120 130 140 150 fk0832 NVEDVHARTAEEPPQEKAPEPTDARKKGEKRKAESGWVHVEEDRNTNVYVSGLPPDITVD ::..: :::::::::.:.:::.: .:.::::::: :: :::::::::::::::::::::: gi|740 NVQEVSARTAEEPPQRKTPEPNDPKKRGEKRKAEPGWFHVEEDRNTNVYVSGLPPDITVD 240 250 260 270 280 290 160 170 180 190 200 210 fk0832 EFIQLMSKFGIIMRDPQTEEFKVKLYKDNQGNLKGDGLCCYLKRESVELALKLLDEDEIR :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|740 EFIQLMSKFGIIMRDPQTEEFKVKLYKDNQGNLKGDGLCCYLKRESVDLALKLLDEDEIR 300 310 320 330 340 350 220 230 240 250 260 270 fk0832 GYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKLSMQQKQLDWRPERRAGPSRMRHERVVI ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|740 GYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKLSLQQKQLDWRPERRAGPSRMRHERVVI 360 370 380 390 400 410 280 290 300 310 320 330 fk0832 IKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 IKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADY 420 430 440 450 460 470 340 350 360 370 380 390 fk0832 CIQTLDGRWFGGRQITAQAWDGTTDYQVEETSREREERLRGWEAFLNAPEANRGLRRSDS :::::::::::::::::::::::::::::::.:::::::::::::::::::::.::::.: gi|740 CIQTLDGRWFGGRQITAQAWDGTTDYQVEETTREREERLRGWEAFLNAPEANRSLRRSNS 480 490 500 510 520 530 400 410 420 430 440 450 fk0832 VSASERAGPSRARHFSEHPSTSKMNAQETATGMAFEEPIDEKKFEKTEDGGEFEEGASEN . :::::::::.:::::.::::::::::.. :::::::::::::::::::::: :::. gi|740 ICASERAGPSRVRHFSERPSTSKMNAQEATREMAFEEPIDEKKFEKTEDGGEFEGDASEK 540 550 560 570 580 590 460 470 480 490 fk0832 NAKESSPEKEAEEGCPEKESEEG---------CPKRGFEASCSQKES---------EEGN .::::.::::::::: .:::::: :::: : . ..:: :::. gi|740 DAKESGPEKEAEEGCAQKESEEGSLKTESEEGCPKREREEDYPERESGEGSPEKEFEEGG 600 610 620 630 640 650 500 510 520 530 540 550 fk0832 PVRGSEEDSPKKESKKKTLKNDCEENGLAKESEDDL-NKESEEEVGPTKESEEDDSEKES : :.:..:..::::: :::: ::::: :.:..: .:: ::: .: :::::::::.:: gi|740 PKAESKENGPEQESKKKRLKNDYEENGLEKDSDQDGPSKECEEE-SPQKESEEDDSERES 660 670 680 690 700 710 560 570 580 590 600 610 fk0832 DEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENILDKELEENDSENSEFEDDGSE .:: :::: :::::.::::::::::.::..:.::. :::::.:.:.:::..::: :..:: gi|740 EEDFSEKQFEDGSEKEFEENGLEKDFDEDASDKEFGENILDREFEDNDSDKSEFGDSSSE 720 730 740 750 760 770 620 630 640 650 660 670 fk0832 KVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLEAADKKAEEGDA .:..:: :::::::.::.::: ::::::::::::::.:::.:::::::: :. gi|740 RVFEEEVSEREFDEESDDKEEGEDTYEKVFDDESDEREDEDYADEKGLE---------DV 780 790 800 810 820 680 690 700 710 720 fk0832 DEKLFEESDDKEDEDA-DGKEVEDADEKLFEDDDSNEKLFDEE-EDSSEKLFDDSDERGT :::.::.:::::::.. . :: ::.:.:.::.:::: ::::.. :::::::::::::::: gi|740 DEKMFEDSDDKEDEEGVEIKEGEDVDDKMFEEDDSNGKLFDDDDEDSSEKLFDDSDERGT 830 840 850 860 870 880 730 740 750 fk0832 LGGFGSV-EEGPLSTGSSFILSSDDD-DDDI . : :.: :::::::::::.:::::: :::: gi|740 VRGVGNVKEEGPLSTGSSFVLSSDDDVDDDI 890 900 910 758 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Mon Aug 11 05:34:44 2008 done: Mon Aug 11 05:36:39 2008 Total Scan time: 975.170 Total Display time: 0.370 Function used was FASTA [version 34.26.5 April 26, 2007]