hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090525/iprscan-20090525-15333550/chunk_1/iprscan-20090525-15333550.nocrc
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Query sequence: fk08386
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00360                                                 175.6    4.8e-48   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00360    1/2      76   148 ..     1   121 []    94.0  1.8e-23
SM00360    2/2     167   239 ..     1   121 []    81.7  9.2e-20

Alignments of top-scoring domains:
SM00360: domain 1 of 2, from 76 to 148: score 94.0, E = 1.8e-23
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                      +lf+g+L  ++++tee Lr++               ++ Gk++++ +
     fk08386    76    KLFIGGL--SFETTEESLRNYY--------------EQWGKLTDCVV 106  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                   +rd+                      +++s+Gf+FV+F++ +++++A  +
     fk08386   107 MRDPA---------------------SKRSRGFGFVTFSSMAEVDAA--M 133  

                   ealnaskGkeledgGrptlglrVe<-*
                   +a      + +  +Gr    ++ +   
     fk08386   134 AARP----HSI--DGRV---VEPK    148  

SM00360: domain 2 of 2, from 167 to 239: score 81.7, E = 9.2e-20
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                      +lfVg++   +d+ e  Lr++F              +++Gk+  + i
     fk08386   167    KLFVGGI--KEDTEEHHLRDYF--------------EEYGKIDTIEI 197  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                   ++d++                     +Gk +Gf+FV+F+d++ ++k   +
     fk08386   198 ITDRQ---------------------SGKKRGFGFVTFDDHDPVDKI--V 224  

                   ealnaskGkeledgGrptlglrVe<-*
                    +      +++  +G+     +V+   
     fk08386   225 LQKY----HTI--NGHN---AEVR    239  

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