hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-06475362/chunk_1/iprscan-20080811-06475362.nocrc
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Query sequence: fk09284
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
PF01762.12.ls Galactosyltransferase                      164.7    2.1e-46   1
PF01762.12.fs Galactosyltransferase                      162.9    7.4e-46   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
PF01762.12.fs   1/1     104   303 ..     1   216 []   162.9  7.4e-46
PF01762.12.ls   1/1     104   303 ..     1   216 []   164.7  2.1e-46

Alignments of top-scoring domains:
PF01762.12.fs: domain 1 of 1, from 104 to 303: score 162.9, E = 7.4e-46
                   *->aRRnaiRkTWmnksnsrgvkdgrikslFlvGl..sakgdgkvkklvm
                       RR +iR+TW+n+++ r  +++ ik+lF +G++++ +g++ ++kl+ 
     fk09284   104    DRRSGIRRTWGNENYVRSQLNANIKTLFALGTpnPLEGEELQRKLAW 150  

                   eEarrtlyGDivvvdleDtYlnLtfKTltlllyvvskapsakligKiDdD
                   e+ r   y Di+++d++D+++nLt+K l+ ++++++++p+ak+++  DdD
     fk09284   151 EDQR---YNDIIQQDFVDSFYNLTLKLLMQFSWANTYCPHAKFLMTADDD 197  

                   VmfnpdkLlslLdreniridpselsfyGylfkegepvrnkkskrqrehWY
                   +++ +++L+++L+     i+++++++ G+++++ +p+r+k sk      Y
     fk09284   198 IFIHMPNLIEYLQSL-EQIGVQDFWI-GRVHRGAPPIRDKSSK-----YY 240  

                   vppsaYkcsrHHWPNgnkYppYvsGpfYlltrdAAplilkaskhr.nfit
                   v+++ Y  +         Yp Y +G +Y++++d A ++++as  ++  + 
     fk09284   241 VSYEMYQWPA--------YPDYTAGAAYVISGDVAAKVYEASQTLnSSLY 282  

                   vEDvliTGilAndlgisrkdlp<-*
                   ++Dv+  G +An++gi ++d     
     fk09284   283 IDDVFM-GLCANKIGIVPQDHV    303  

PF01762.12.ls: domain 1 of 1, from 104 to 303: score 164.7, E = 2.1e-46
                   *->aRRnaiRkTWmnksnsrgvkdgrikslFlvGl..sakgdgkvkklvm
                       RR +iR+TW+n+++ r  +++ ik+lF +G++++ +g++ ++kl+ 
     fk09284   104    DRRSGIRRTWGNENYVRSQLNANIKTLFALGTpnPLEGEELQRKLAW 150  

                   eEarrtlyGDivvvdleDtYlnLtfKTltlllyvvskapsakligKiDdD
                   e+ r   y Di+++d++D+++nLt+K l+ ++++++++p+ak+++  DdD
     fk09284   151 EDQR---YNDIIQQDFVDSFYNLTLKLLMQFSWANTYCPHAKFLMTADDD 197  

                   VmfnpdkLlslLdreniridpselsfyGylfkegepvrnkkskrqrehWY
                   +++ +++L+++L+     i+++++++ G+++++ +p+r+k sk      Y
     fk09284   198 IFIHMPNLIEYLQSL-EQIGVQDFWI-GRVHRGAPPIRDKSSK-----YY 240  

                   vppsaYkcsrHHWPNgnkYppYvsGpfYlltrdAAplilkaskhr.nfit
                   v+++ Y  +         Yp Y +G +Y++++d A ++++as  ++  + 
     fk09284   241 VSYEMYQWPA--------YPDYTAGAAYVISGDVAAKVYEASQTLnSSLY 282  

                   vEDvliTGilAndlgisrkdlp<-*
                   ++Dv+  G +An++gi ++d     
     fk09284   283 IDDVFM-GLCANKIGIVPQDHV    303  

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