hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080811/iprscan-20080811-06594859/chunk_1/iprscan-20080811-06594859.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: fk09382 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00365.10.fs Phosphofructokinase 928.2 0 3 PF00365.10.ls Phosphofructokinase 932.9 1.2e-277 2 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00365.10.fs 1/3 31 341 .. 1 312 [] 764.6 4.9e-265 PF00365.10.ls 1/2 31 341 .. 1 312 [] 766.7 1.3e-227 PF00365.10.ls 2/2 416 704 .. 1 312 [] 166.2 7.7e-47 PF00365.10.fs 2/3 417 632 .. 1 241 [. 122.2 1.4e-42 PF00365.10.fs 3/3 667 704 .. 275 312 .] 41.3 1.4e-14 Alignments of top-scoring domains: PF00365.10.fs: domain 1 of 3, from 31 to 341: score 764.6, E = 4.9e-265 *->KkIgVLTSGGDApGMNAAiRAVVRsAiaeGleVygIyeGYaGLvaGG K+I+VLTSGGDA+GMNAA+RAVVR++i++G++V++++eGY+GLv+GG fk09382 31 KAIAVLTSGGDAQGMNAAVRAVVRVGIFTGARVFFVHEGYQGLVDGG 77 dnIkqlewesVsdiiqrGGTilgSARcpEFrerEGRlkAaenLkkhGIda d+Ik+++wesVs+++q+GGT++gSARc++FrerEGRl+Aa+nL+k+GI++ fk09382 78 DHIKEATWESVSMMLQLGGTVIGSARCKDFREREGRLRAAYNLVKRGITN 127 LVVIGGDGSytGAdlLtsEhgsLleeLvkeGkiteeevakyqylnivGlp L+VIGGDGS+tGAd+++sE+++Ll++L+k+Gkit+ee++k++ylnivGl+ fk09382 128 LCVIGGDGSLTGADTFRSEWSDLLSDLQKAGKITDEEATKSSYLNIVGLV 177 GTIDNDisGTDyTIGfdTAlntiveaIDrIrdTAsSHqRtFVVEVMGRhC G+IDND++GTD+TIG+d+Al++i+e++D+I++TA+SHqRtFV+EVMGRhC fk09382 178 GSIDNDFCGTDMTIGTDSALHRIMEIVDAITTTAQSHQRTFVLEVMGRHC 227 GdlALvaGiAgGADyIvIPEapApedfweeelanrlkrgrerGKrhnIvi G+lALv+++++GAD+++IPE+p p+d+wee+l++rl+++r+rG+r+nI+i fk09382 228 GYLALVTSLSCGADWVFIPECP-PDDDWEEHLCRRLSETRTRGSRLNIII 276 VAEgaidkqgkpitseavkklkvegLgldtRvTVLGHvQRGGtPtAfDRi VAEgaidk+gkpitse++k+l+v++Lg+dtRvTVLGHvQRGGtP+AfDRi fk09382 277 VAEGAIDKNGKPITSEDIKNLVVKRLGYDTRVTVLGHVQRGGTPSAFDRI 326 LASrmGaeAVeaLLe<-* L+SrmG+eAV+aLLe fk09382 327 LGSRMGVEAVMALLE 341 PF00365.10.ls: domain 1 of 2, from 31 to 341: score 766.7, E = 1.3e-227 *->KkIgVLTSGGDApGMNAAiRAVVRsAiaeGleVygIyeGYaGLvaGG K+I+VLTSGGDA+GMNAA+RAVVR++i++G++V++++eGY+GLv+GG fk09382 31 KAIAVLTSGGDAQGMNAAVRAVVRVGIFTGARVFFVHEGYQGLVDGG 77 dnIkqlewesVsdiiqrGGTilgSARcpEFrerEGRlkAaenLkkhGIda d+Ik+++wesVs+++q+GGT++gSARc++FrerEGRl+Aa+nL+k+GI++ fk09382 78 DHIKEATWESVSMMLQLGGTVIGSARCKDFREREGRLRAAYNLVKRGITN 127 LVVIGGDGSytGAdlLtsEhgsLleeLvkeGkiteeevakyqylnivGlp L+VIGGDGS+tGAd+++sE+++Ll++L+k+Gkit+ee++k++ylnivGl+ fk09382 128 LCVIGGDGSLTGADTFRSEWSDLLSDLQKAGKITDEEATKSSYLNIVGLV 177 GTIDNDisGTDyTIGfdTAlntiveaIDrIrdTAsSHqRtFVVEVMGRhC G+IDND++GTD+TIG+d+Al++i+e++D+I++TA+SHqRtFV+EVMGRhC fk09382 178 GSIDNDFCGTDMTIGTDSALHRIMEIVDAITTTAQSHQRTFVLEVMGRHC 227 GdlALvaGiAgGADyIvIPEapApedfweeelanrlkrgrerGKrhnIvi G+lALv+++++GAD+++IPE+p p+d+wee+l++rl+++r+rG+r+nI+i fk09382 228 GYLALVTSLSCGADWVFIPECP-PDDDWEEHLCRRLSETRTRGSRLNIII 276 VAEgaidkqgkpitseavkklkvegLgldtRvTVLGHvQRGGtPtAfDRi VAEgaidk+gkpitse++k+l+v++Lg+dtRvTVLGHvQRGGtP+AfDRi fk09382 277 VAEGAIDKNGKPITSEDIKNLVVKRLGYDTRVTVLGHVQRGGTPSAFDRI 326 LASrmGaeAVeaLLe<-* L+SrmG+eAV+aLLe fk09382 327 LGSRMGVEAVMALLE 341 PF00365.10.ls: domain 2 of 2, from 416 to 704: score 166.2, E = 7.7e-47 *->KkIgVLTSGGDApGMNAAiRAVVRsAiaeGleVygIyeGYaGLvaGG +V+ G A GMNAA+R+ VR ++ +G +V ++++G++GL +G fk09382 416 HTVAVMNVGAPAAGMNAAVRSTVRIGLIQGNRVLVVHDGFEGLAKG- 461 dnIkqlewesVsdiiqrGGTilgSARc...pEFrerEGRlkAaenLkkhG +I+++ w V+ + GG lg+ R +++ F + +n k+ fk09382 462 -QIEEAGWSYVGGWTGQGGSKLGTKRTlpkKSFEQIS------ANITKFN 504 IdaLVVIGGDGSytGAdlLtsEhgsLleeLvkeGkiteeevakyqylniv I +LV+IGG ytG + L E+ eL ++ v fk09382 505 IQGLVIIGGFEAYTGGLELM-EGRKQFDELC---------------IPFV 538 GlpGTIDNDisGTDyTIGfdTAlntiveaIDrIrdTAs.SHqRtFVVEVM p T N ++G+D+ G+dTAlnti+ DrI+ A++ R+F++E M fk09382 539 VIPATVSNNVPGSDFSVGADTALNTICTTCDRIKQSAAgTKRRVFIIETM 588 GRhCGdlALvaGiAgGADyIvIPEapApedfweeelanrlkrgrerGK.. G +CG+lA +aG+A+GAD+ I E+p f +l ++++ ++ K++ fk09382 589 GGYCGYLATMAGLAAGADAAYIFEEP----FTIRDLQANVEHLVQKMKtt 634 .rhnIviVAEgaidkqgkpitseavkklkvegLgldtRvTVLGHvQRGGt + +v E + ++ + ++ + +d R +VLGH+Q GG+ fk09382 635 vKRGLVLRNEKCNENYTTDFIFNLYSEEGKGI--FDSRKNVLGHMQQGGS 682 PtAfDRiLASrmGaeAVeaLLe<-* Pt+fDR A++mGa+A + fk09382 683 PTPFDRNFATKMGAKAMNWMSG 704 PF00365.10.fs: domain 2 of 3, from 417 to 632: score 122.2, E = 1.4e-42 *->KkIgVLTSGGDApGMNAAiRAVVRsAiaeGleVygIyeGYaGLvaGG +V+ G A GMNAA+R+ VR ++ +G +V ++++G++GL +G fk09382 417 -TVAVMNVGAPAAGMNAAVRSTVRIGLIQGNRVLVVHDGFEGLAKG- 461 dnIkqlewesVsdiiqrGGTilgSARc...pEFrerEGRlkAaenLkkhG +I+++ w V+ + GG lg+ R +++ F + +n k+ fk09382 462 -QIEEAGWSYVGGWTGQGGSKLGTKRTlpkKSFEQIS------ANITKFN 504 IdaLVVIGGDGSytGAdlLtsEhgsLleeLvkeGkiteeevakyqylniv I +LV+IGG ytG + L E+ eL ++ v fk09382 505 IQGLVIIGGFEAYTGGLELM-EGRKQFDELC---------------IPFV 538 GlpGTIDNDisGTDyTIGfdTAlntiveaIDrIrdTAs.SHqRtFVVEVM p T N ++G+D+ G+dTAlnti+ DrI+ A++ R+F++E M fk09382 539 VIPATVSNNVPGSDFSVGADTALNTICTTCDRIKQSAAgTKRRVFIIETM 588 GRhCGdlALvaGiAgGADyIvIPEapApedfweeelanrlkrgrerGK<- G +CG+lA +aG+A+GAD+ I E+p f +l ++++ ++ K fk09382 589 GGYCGYLATMAGLAAGADAAYIFEEP----FTIRDLQANVEHLVQKMK 632 * fk09382 - - PF00365.10.fs: domain 3 of 3, from 667 to 704: score 41.3, E = 1.4e-14 *->ldtRvTVLGHvQRGGtPtAfDRiLASrmGaeAVeaLLe<-* +d R +VLGH+Q GG+Pt+fDR A++mGa+A + fk09382 667 FDSRKNVLGHMQQGGSPTPFDRNFATKMGAKAMNWMSG 704 //