hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/TIGRFAMs_HMM.LIB.bin Sequence file: /db/iprscan/tmp/20080811/iprscan-20080811-06594859/chunk_1/iprscan-20080811-06594859.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: fk09382 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TIGR02478 6PF1K_euk: 6-phosphofructokinase 1664.9 0 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TIGR02478 1/1 31 772 .. 1 777 [] 1664.9 0 Alignments of top-scoring domains: TIGR02478: domain 1 of 1, from 31 to 772: score 1664.9, E = 0 *->krIgVLTSGGDAqGMNAAVRAVVRmaIyvGCrVYaIrEGYeGLVdGG k+I+VLTSGGDAqGMNAAVRAVVR +I+ G+rV+++ EGY+GLVdGG fk09382 31 KAIAVLTSGGDAQGMNAAVRAVVRVGIFTGARVFFVHEGYQGLVDGG 77 DnIeelsWeDVrGiLslGGTlIGTARCkeFRERpGRLkAArNLikrGIDa D I+e+ We+V+ L+lGGT+IG+ARCk+FRER+GRL+AA+NL+krGI++ fk09382 78 DHIKEATWESVSMMLQLGGTVIGSARCKDFREREGRLRAAYNLVKRGITN 127 LvVIGGDGSLTGADlFReEWpsLleELvdtgkItaEqakehrhLtIVGLV L+VIGGDGSLTGAD FR+EW++Ll+ L + gkIt E a + +L+IVGLV fk09382 128 LCVIGGDGSLTGADTFRSEWSDLLSDLQKAGKITDEEATKSSYLNIVGLV 177 GSIDNDmcgTDmTIGAdSALHRIcEAiDaIssTAqSHQRaFVVEVMGRHC GSIDND+cgTDmTIG+dSALHRI E +DaI +TAqSHQR+FV+EVMGRHC fk09382 178 GSIDNDFCGTDMTIGTDSALHRIMEIVDAITTTAQSHQRTFVLEVMGRHC 227 GyLALmAAiATGADYvFIPErPPeegdWedqLCakLkrnRkaGkRknIVI GyLAL+ ++++GAD+vFIPE+PP+++ We++LC+ L++ R +G R+nI+I fk09382 228 GYLALVTSLSCGADWVFIPECPPDDD-WEEHLCRRLSETRTRGSRLNIII 276 VAEGAiDrelnpITsedVKdvLverLglDTRITvLGHVQRGGaPsAyDRi VAEGAiD ++pITsed+K+++v rLg+DTR+TvLGHVQRGG+PsA+DRi fk09382 277 VAEGAIDKNGKPITSEDIKNLVVKRLGYDTRVTVLGHVQRGGTPSAFDRI 326 LAtlqGvEAVlAvLesTPeteGAVVTGQKtPSpVIslrgNkIvRkPLvea L++++GvEAV A+Le+TP+t P++V+sl+gN++vR+PL+e+ fk09382 327 LGSRMGVEAVMALLEGTPDT----------PACVVSLSGNQAVRLPLMEC 366 VrqTktVakaikerrFdeAvrLRgreFvenlatflelskpdqdkklvpsk V+ Tk V+ka++e+ FdeA++LRgr+F++n + ++ l+ ++ + + s fk09382 367 VQVTKDVTKAMDEKKFDEALKLRGRSFMNNWEVYKLLAHVRPPVSKSGSH 416 adrlnlRvAIiHvGAPAgGMNaAtRaaVRyalarGHtviAIhNGFsGLar + vA+++vGAPA+GMNaA+R+ VR +l G +v+ +h+GF+GLa+ fk09382 417 T------VAVMNVGAPAAGMNAAVRSTVRIGLIQGNRVLVVHDGFEGLAK 460 gdDDtPiCSvrELtWsDVeGWvgeGGSelGTnReLPngkDlgeiAykfqk g+ + E +Ws V+GW+g+GGS lGT+R+LP k ++ i++ + k fk09382 461 GQ-------IEEAGWSYVGGWTGQGGSKLGTKRTLP-KKSFEQISANITK 502 hkiDGLlIIGGFEAFeallqLeqaRekYPaFrIPMVvIPATISNNVPGTE ++i+GL+IIGGFEA+++ l+L+++R ++ +++IP VvIPAT+SNNVPG++ fk09382 503 FNIQGLVIIGGFEAYTGGLELMEGRKQFDELCIPFVVIPATVSNNVPGSD 552 ySLGsDTALNeiteyCDkIKQSAsaskrRvFVvETmGGySGYLATmaGLa +S G+DTALN+i+ +CD+IKQSA+++krRvF++ETmGGy+GYLATmaGLa fk09382 553 FSVGADTALNTICTTCDRIKQSAAGTKRRVFIIETMGGYCGYLATMAGLA 602 tGAdAaYipEegIslkdLqeDiehLkekfaegagkNragkLiLRNEnASk +GAdAaYi+Ee+++++dLq ++ehL k++++ ++++L+LRNE++ + fk09382 603 AGADAAYIFEEPFTIRDLQANVEHLVQKMKTT----VKRGLVLRNEKCNE 648 nYTTdfIariisEEakGrFdaRtaVLGHmQQGGsPSPfDRvrAtRlAirA nYTTdfI +++sEE+kG+Fd+R++VLGHmQQGGsP+PfDR++At+++++A fk09382 649 NYTTDFIFNLYSEEGKGIFDSRKNVLGHMQQGGSPTPFDRNFATKMGAKA 698 vdfIeekikanksadklaaddtkeltdsavViGirgSnvlFtpVkGqlla +++ kik++ ++ ++a ds +V+G r++ + F+pV+ +l+ fk09382 699 MNWMSGKIKESYRNGRIFANTP----DSGCVLGMRKRALVFQPVA--ELK 742 keTdfehRrPKeqWWldLrpLvriLagrks<-* TdfehR+PKeqWWl+Lrp+++iLa++ fk09382 743 DQTDFEHRIPKEQWWLKLRPILKILAKYEI 772 //