hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-07372305/chunk_1/iprscan-20080811-07372305.nocrc
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Query sequence: fk09725
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00150                                                 151.8    6.9e-41   3
SM00054                                                  42.3    6.3e-08   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00150    1/3     174   275 ..     1   104 []    94.8  9.9e-24
SM00150    2/3     289   396 ..     1   104 []    50.4  2.4e-10
SM00150    3/3     410   509 ..     1   104 []     6.6      2.2
SM00054    1/2     527   555 ..     1    29 []    17.4      1.1
SM00054    2/2     563   591 ..     1    29 []    25.0    0.011

Alignments of top-scoring domains:
SM00150: domain 1 of 3, from 174 to 275: score 94.8, E = 9.9e-24
                   *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea
                      ++F ++a   e W   keq+l ++d+ es +l++v+all+kH+a+e 
     fk09725   174    EKFRQKASTHETWAYGKEQILLQKDY-ESASLTEVRALLRKHEAFES 219  

                   elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae
                   +laah++rv+++ + +++L e    +da ++ +r++++ ++W++L  l++
     fk09725   220 DLAAHQDRVEQIAAIAQELNEL-DYHDAVNVNDRCQKICDQWDRLGTLTQ 268  

                   eRrqkLe<-*
                   +Rr++Le   
     fk09725   269 KRREALE    275  

SM00150: domain 2 of 3, from 289 to 396: score 50.4, E = 2.4e-10
                   *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea
                       +F + a+ + +W+e +++ l+++ +   +++e++++l+  H++++a
     fk09725   289    LEFAKRAAPFNNWMEGAMEDLQDMFIV--HSIEEIQSLITAHEQFKA 333  

                   el...aaheervdalnelgeqLiee...sghpdaeeIeerleelnerWee
                    l++ +  ++++ a++++ e+ i++ +       ++    ++el+++W++
     fk09725   334 TLpeaDGERQSIMAIQNEVEKVIQSyniRISSSNPYSTVTMDELRTKWDK 383  

                   LlelaeeRrqkLe<-*
                   +++l+  R q L+   
     fk09725   384 VKQLVPIRDQSLQ    396  

SM00150: domain 3 of 3, from 410 to 509: score 6.6, E = 2.2
                   *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea
                      +qF + a+ +  W+++k++  +   +   +   ++e+++ ++++ e+
     fk09725   410    RQFAAQANAIGPWIQNKMEEIARSSI---QITGALEDQMNQLKQYEH 453  

                   elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae
                    + ++++ +d+l+    qLi+e+  +d ++    +e+++  We Ll   +
     fk09725   454 NIINYKNNIDKLEGD-HQLIQEALVFDNKHTNYTMEHIRVGWELLLTTIA 502  

                   eRrqkLe<-*
                   +  +  e   
     fk09725   503 RTINEVE    509  

SM00054: domain 1 of 2, from 527 to 555: score 17.4, E = 1.1
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                      e+++ F++fD+ ++G  d e+f+a+l s+   
     fk09725   527    EFRASFNHFDRRKNGLMDHEDFRACLISM    555  

SM00054: domain 2 of 2, from 563 to 591: score 25.0, E = 0.011
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                      e+ +++ ++D +g G+++f+ f++++++    
     fk09725   563    EFARIMTLVDPNGQGTVTFQSFIDFMTRE    591  

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